Oncorhynchus gorbuscha (pink salmon): 123994301
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Entry
123994301 CDS
T07892
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like
KO
K11727
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 1 [EC:5.6.2.-]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123994301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
123994301
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Chromatin remodeling factors
NuRF complex
123994301
CERF complex
123994301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
DBINO
Myb_DNA-binding
CHDII_SANT-like
TPR_15
UBA_2
Motif
Other DBs
NCBI-GeneID:
123994301
NCBI-ProteinID:
XP_046152760
LinkDB
All DBs
Position
LG02:72694994..72720952
Genome browser
AA seq
1021 aa
AA seq
DB search
MSDEEIPSTSREPLPEDEEAKDPPFQLKPPPKALPKAEGEVDPEYEEKRKTDRANRFEFL
LKQTELFAHFIQPASQKSPTSPLKVKPGRPRVKQDEKQNLLSVGDNRHRRTEQEEDEELL
SESRKAANVLVRFEESPSYVKNGELRDYQIRGLNWMISLYENGINGILADEMGLGKTLQT
IALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPTLKAVCLIGDKDARAAFIRDVM
MPGEWDVCVTSYEMVIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLL
TGTPLQNNLHELWSLLNFLLPDVFNSANDFDSWFDTNNCLGDQKLVERLHAVLRPFLLRR
IKAEVEKNLPPKKEVKIYLGLSKMQREWYTRILMKDIDILNSSGKTDKMRLLNILMQLRK
CCNHPYLFDGAEPGPPYTTDTHLVTNSGKMVALDKLLPKVQEQGSRVLIFSQMTRVLDIL
EDYCMWRGYEYCRLDGNTPHEARQEAIEAYNADNSSKFIFMLSTRAGGLGINLATADVVI
LYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEMKLRLDSIVIQQG
RLMEQSNKLGKDEMLQMIRHGATHVFASKDNELTEEDINTILERGAKKTAEMNERMESLG
ESSLRNFTVDTGGAETSLYNFEGEDYREKQKLSMMEWIEPPKRERKANYAVDAYFREALR
VSEPRAPKAPRPPKQPNIQDFQFFPPRLFELLEMEILFYRNTIGYKVPRSPDISNSAQVQ
KEEQRKIDEAGPLSPEETEEKEKLLTQGFTSWNKRDFNQFIKANEKYGRDDIDNIAREVE
GKNPEEVIEYSAIFWERCNELQDIEKIMAQMERGEARIQRRISIKKALDAKVARYKAPFH
QLRIQYGTNKGKNYTEEEDRFLICMLHKMGFDKENVYEELRQCVRNAPQFRFDWFIKSRT
AMELQRRCNTLISLIEKENMEIEEKERAEKKKKTPKSQTAHKRKADASSEGTGRKEKKAR
A
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgaagagattccgtcaacttccagagagcctttacccgaagatgaagaggca
aaagaccccccatttcagctgaagccacctccaaaggctttgcctaaggcggagggagag
gtggatccagaatacgaagagaaaaggaaaacagatagagcgaaccggtttgagtttctg
ctcaagcaaacagaactctttgcccacttcatccagcctgcgtctcagaagtctcctact
tcacccctgaaagtgaaacctggacgacctcgcgttaaacaggatgagaaacaaaatctc
ctctctgttggagataaccgccaccgacgcacagaacaggaagaagatgaggagttgtta
tctgagagcaggaaggcagctaacgtcttggttcgctttgaagagtccccatcctatgta
aaaaatggagagctgagagattaccaaatcagaggtctcaactggatgatctccctttat
gaaaatggcattaatggaatcttggctgatgaaatgggcttggggaagaccctccaaacc
attgcgttgctgggatacctgaagcattacaggaacattccaggcccccacatggttctg
gttcccaaatcaacgctacacaactggatgaatgagttcaaacgctgggtaccaaccctt
aaggcagtctgtctcatcggggacaaggatgcaagagcggctttcatccgtgatgtcatg
atgccaggggaatgggatgtttgtgtcacatcctatgagatggtcatcagagagaaatct
gtcttcaagaagttcaactggagataccttgtcattgacgaagctcatagaataaaaaat
gagaagtctaagctctcagagattgtccgtgagttcaaaaccaccaaccgtctcctcctg
actggaacacctctgcagaacaacctccatgagctgtggtcactcctcaacttcctgctg
cctgatgtcttcaactctgccaatgactttgattcttggtttgacaccaacaactgtctg
ggggaccagaagctggtggagcgtctgcatgcggtgctgaggcctttccttctgcgtcgc
attaaagctgaagtggagaaaaacctgcctcccaaaaaagaggtgaagatttacctcgga
ctgagtaagatgcagcgagaatggtacacacggattctgatgaaggacattgacatcctc
aattcttctggaaaaactgacaagatgcgtctcttgaacatcctgatgcagctgcggaag
tgctgcaaccacccatacctgtttgatggggccgagcctggacccccctacacaaccgac
actcaccttgtaaccaacagcggcaaaatggtggccctggacaaactgctgcccaaagtc
caggagcaagggtctagagtcctcatcttcagccagatgaccagggtccttgacattctt
gaggactactgcatgtggagaggttatgagtactgccgtctagatgggaacactccacac
gaagccagacaggaagccatagaggcctacaatgctgacaacagcagcaagttcattttc
atgttgagcaccagagctggaggtctcggcattaacttggcaactgcagacgtcgtcatc
ctgtatgactccgactggaaccctcaagtggatctgcaagcaatggacagggctcataga
attggtcagaagaaaccagtgcgtgtgttccgcctcatcactgataatacagtcgaagag
aggattgtagagagagctgagatgaagttgaggctagactccattgttatacaacaaggg
aggctgatggagcagtccaacaagctggggaaagatgagatgctgcagatgatcaggcat
ggggccactcacgtcttcgcctccaaagacaatgagctcacggaggaagacatcaacacc
atcttagagaggggggcaaagaagacagctgagatgaacgagcgcatggagtctctggga
gaaagctctctcaggaacttcactgtggataccggaggagcagagaccagcctctacaac
tttgaaggggaggactacagagagaagcaaaagctgagtatgatggaatggattgagcct
cctaaaagagagaggaaagccaactatgcggtggatgcctacttcagagaggccctgcgt
gtcagtgaacctcgagcccccaaggccccacgtccccccaaacagcccaacatccaggac
ttccagttctttccccctcgcctgtttgagctgctagagatggagatccttttctacagg
aatactataggctacaaggtgcccaggagccctgacatttctaactctgctcaggtgcag
aaggaggagcagaggaagatcgacgaggcagggcccctcagtcctgaggagactgaggag
aaggagaagcttcttacacagggattcacaagttggaacaagcgagatttcaatcagttc
attaaagccaatgagaaatatggccgtgatgacatcgacaacatcgctcgggaagttgag
gggaaaaaccctgaagaagtcattgaatattctgccattttctgggagcgatgcaatgaa
ctccaggatattgagaagatcatggcccagatggagcgtggtgaggcccgcatccagagg
aggatcagcattaagaaggcactggatgctaaggttgcgagatacaaggcccctttccac
cagttgaggattcagtatggcaccaataaagggaagaactacacagaggaggaggacagg
ttcctgatctgtatgcttcacaagatgggctttgacaaggagaatgtttatgaggaactc
cgacagtgtgtccggaacgctccacagttcagatttgactggttcatcaaatcccgaact
gccatggaactccagcgacgttgtaacactctcatctccctcatcgaaaaagaaaatatg
gagattgaggaaaaggagcgtgctgaaaagaagaaaaagacaccaaaaagccagacggct
cacaaaaggaaggcagatgcatcatcagaaggcacaggacgcaaagagaagaaagcgaga
gcctga
DBGET
integrated database retrieval system
