Oncorhynchus gorbuscha (pink salmon): 123994331
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Entry
123994331 CDS
T07892
Symbol
psmc2
Name
(RefSeq) 26S proteasome regulatory subunit 7
KO
K03061
26S proteasome regulatory subunit T1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
123994331 (psmc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ogo03051
]
123994331 (psmc2)
Proteasome [BR:
ogo03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
123994331 (psmc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
OB_PRS7
AAA_lid_3
AAA_22
AAA_2
AAA_5
AAA_16
DUF815
nSTAND3
AAA_14
RuvB_N
AAA_28
AAA_7
Prot_ATP_ID_OB_C
AAA_33
TIP49
AAA_18
Mg_chelatase
RNA_helicase
Sigma54_activ_2
IstB_IS21
Flavodoxin_3
AAA_24
Motif
Other DBs
NCBI-GeneID:
123994331
NCBI-ProteinID:
XP_046152781
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All DBs
Position
LG14:5499908..5504386
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AA seq
434 aa
AA seq
DB search
MPDYLGGDQRKIKDAKEEEDKPIRSLDEGDIALLKTYGQSTYSRQIKQVEDDIQNLLKKI
NELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFA
KFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGG
CKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIR
VIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTM
LELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHA
RSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKS
YAKFSATPRYMTYN
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgccagattatttgggaggcgatcaaaggaaaatcaaagatgccaaagaagaggaggat
aaacctatcagatctttggatgaaggagacattgccttattgaaaacttatggccagagc
acttactccagacagattaagcaagtggaagatgacatccaaaacctgctcaagaagatc
aatgaactaaccggcattaaggaatcggacactggtctggctccccctgcactttgggat
ctggctgcagacaaacagactctgcagagcgagcagccactgcaggtggcaagatgcaca
aagatcatcaacgctgactctgaagatccaaaatacatcatcaatgtgaagcagtttgcc
aagtttgtggtggacctgagtgaccaggtggcccccactgacatagaggagggtatgaga
gtcggtgtggacagaaacaagtaccagatccacattcctctgcctcccaagattgacccc
acagtcactatgatgcaggtggaggagaagcctgatgtgacctacagtgacgtgggtgga
tgtaaagagcagattgagaagctcagggaggtggtggagaccccactgctccatcccgag
aggtttgtcaacctgggtattgagcccccgaagggggttctgctgttcggcccacctggt
acaggtaaaaccctgtgtgccagagccgtggccaaccgcaccgatgcctgcttcatcagg
gtcatcggctcagagctggtccagaaatatgtgggagagggtgccagaatggtgcgggag
cttttcgagatggccagaaccaagaaggcatgtctcatcttcttcgacgaaattgacgct
attggaggggcccgttttgatgacggtgccggtggggacaatgaggtccagaggaccatg
cttgagctcatcaaccagctggacggcttcgaccccagggggaacatcaaggtcctgatg
gccaccaaccggcccgacaccctggacccggccctcatgaggcccgggcgactggacagg
aagattgagttcagcctgccagacctggagggtcgtactcacatcttcaagatccatgcc
cgctccatgagcgtggagagagacatccgcttcgagctgctggctcgtctctgtcccaac
agcacaggtgctgagattcgcagcgtgtgcacggaggcgggtatgttcgccatccgcgcc
cgccggaagatcgccactgagaaggacttcctggaggcggtcaacaaggtcatcaagtcc
tacgccaagttcagcgccaccccaagatacatgacctacaactaa
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