Oncorhynchus gorbuscha (pink salmon): 123994510
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Entry
123994510 CDS
T07892
Name
(RefSeq) RNA polymerase II-associated protein 3-like isoform X1
KO
K23002
RNA polymerase II-associated protein 3
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogo03021
]
123994510
Transcription machinery [BR:
ogo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
123994510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
RPAP3_C
TPR_2
TPR_8
TPR_11
TPR_19
TPR_12
TPR_16
TPR_17
ARM_TT21_4th
ANAPC3
Motif
Other DBs
NCBI-GeneID:
123994510
NCBI-ProteinID:
XP_046153139
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Position
LG14:14750434..14755958
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AA seq
761 aa
AA seq
DB search
MHYVTDESKECVTLGKVVVCVNCRGAHGAVAQKCPVEKLSYAEAVKKVEEDGSRGTDPER
SGVGMSENKAIELQLQMRQNAEDLHNFMKDLDSWETDIKRKDEQLRTGSFSKSQKSLPPV
RNKDYKKKREKKKASDNNAKTEPKQARRIKSHDYQLWDKFDVDKVLESMDKEDSAAESND
SESEDSGVPATDQDKVLAEKEKGNQLFKEGKYEDAIECYTRGMGADPYNPVLPTNRAACF
FRLKKFAVAESDCNLSIALDSNYFKAFARRGASRFALQHYESALEDYVMVLKLDPGNLEA
QKEVMQCKEVIAKLGGKAESPEAAVVMLPVVDVKQQQLMEEQQRRQEAVVQKDRGNAYFK
EGKYEAAVEYYTKGMEADSTNVLLPANRAMAYLKLQRYKEAEEDCSKAIALDGTYSKAFA
RRGTARAALGLLKQAKEDFEEVLKLEPGNKQAFCEMKKIAIDMDTSGLLATEEHAQRRTV
QPINKPPDLQSTKPLSRVDIEEVCGKILVQEESLAVLTSTTAPRVRHQKTTSIADTVREG
QASPPSTSPSAKIPKIEETSNLPSHSPVKGPVGYAVRAQTQQHREATVSEPTEPPATPST
ELVPPAPTNSFQLEADLRKIGNGPEVIYKYLKQIQPQAYAKIFQSSLEPDMLNQILRTLQ
SFYIKKEEPPVILEILRNLAGVRRFDMAVMFMSNPEKKGTDLVVDLAQFVIHYLTPMQNY
YDIDNGKLFNFFLVLQELFNFLRQAGLEDASVGALQKKYGV
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgcattatgttacagatgagtcaaaggaatgtgtaacattggggaaagtagtggtatgt
gttaattgtaggggtgcccatggggctgtggctcagaagtgtcctgtggaaaagttgtca
tatgctgaggcagtaaagaaagtagaggaagatgggtcaagggggacagatcctgagaga
agtggtgtaggcatgtctgaaaacaaagccattgaactccaactgcaaatgcgacaaaat
gcagaggacctgcataacttcatgaaagatcttgacagctgggaaactgacataaagagg
aaagatgagcaactaagaactgggagctttagcaagtctcaaaaaagcctcccaccagtg
cgaaacaaggactacaaaaagaagagagagaaaaagaaggcatcagacaacaatgcaaag
actgaaccaaaacaagcacgcaggataaagtctcatgactatcagttatgggacaaattt
gatgtggacaaggtattggagtccatggataaagaggacagtgctgctgagtccaatgac
tctgagtctgaggattctggggttcctgcaactgaccaagacaaggtgcttgctgagaag
gagaaaggcaatcagctgttcaaagaagggaagtatgaggatgccattgagtgttacacc
agaggcatgggcgcagacccttataaccccgttctgcctacaaaccgagctgcctgcttc
ttcagactcaaaaagtttgctgttgccgagtctgactgcaacttgtccatcgctttggac
agtaactacttcaaagcatttgcacgaagaggagcatctcgattcgccctgcaacattat
gaatctgccctagaagattatgtaatggttcttaagctggatcctggaaacctggaggca
cagaaggaagtaatgcaatgcaaagaggtcattgctaaactgggtggaaaggcagaaagc
ccagaggctgcagtggtgatgctacctgtggtggacgtcaagcaacagcagctcatggag
gaacagcagaggagacaggaggcggtggtgcagaaagacagggggaatgcatacttcaaa
gaggggaagtatgaggctgcagtagagtactacaccaagggcatggaagcggacagcacc
aacgtcctcctgcctgccaaccgggccatggcttacttaaagctgcagagatataaagag
gctgaggaggactgtagtaaagcaatagccctggatggcacctattcaaaggcctttgcc
cgcagagggacagccagggctgctctgggactgctcaaacaagctaaagaagattttgag
gaggtcctgaagctagaaccaggaaacaagcaggcattttgtgagatgaagaagattgca
attgacatggacaccagtggtctgctggcaacagaagagcatgcacagcggagaacagta
cagccaattaacaaaccacctgacctgcagtcaaccaagccattgagtagagtggacatt
gaagaggtttgtggaaagatcctggtccaggaggagtccttggctgtgttgacttcaacc
acagccccccgtgttaggcaccagaagaccacctccattgcagacactgtgagagagggt
caggcctcacccccctctacctcccccagtgctaagatcccgaagattgaagaaacatca
aacctcccctcacattcccctgtcaaagggcctgtagggtatgctgtgagagcacagaca
cagcagcacagggaggcaactgtcagtgaaccaacagaaccgcctgctacaccatcaact
gagctcgtacctcctgcccccaccaacagcttccagctagaggcagacctaaggaagatt
ggaaatggccctgaagtcatctacaagtatttgaagcaaatccagcctcaggcttatgca
aagatcttccagagctctcttgaaccagacatgctcaatcagattctaaggacgttacaa
agcttctacatcaagaaggaagagccacctgtcatactggagatcctcaggaatctggcc
ggtgtgaggcggttcgatatggctgtcatgttcatgtccaaccctgagaagaaaggtacc
gatttggttgttgacctggcccagtttgtgatacattatttaaccccaatgcaaaattat
tatgacattgataacggcaaactttttaatttttttttagttctacaagaattgtttaac
tttcttcgtcaagctggacttgaggacgcttcagtaggagccctgcaaaagaagtatgga
gtgtga
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