Oncorhynchus gorbuscha (pink salmon): 123994554
Help
Entry
123994554 CDS
T07892
Name
(RefSeq) E3 ubiquitin-protein ligase RNFT1-like isoform X1
KO
K22379
E3 ubiquitin-protein ligase RNFT1 [EC:
2.3.2.27
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
123994554
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123994554
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123994554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-RING_16
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
123994554
NCBI-ProteinID:
XP_046153247
LinkDB
All DBs
Position
LG02:79536958..79544217
Genome browser
AA seq
428 aa
AA seq
DB search
MCFLSTYLVKSDSKRTLKSRVSPTVMQPNSSELGVHQAGHGLSLTLLTRTPAGTSGGSAV
PETSGAVRVPILSSGSWESCRGGASSRRSRASSRTSSHSHSHSHGGGHQHSHSEPSEVDP
DEADLESGEPSTSFLELRYLFRWVQKSLPFIIILCAKLVIQHALGLAVGVGLFTTFLYVN
KNIQTQVFLQDRRSKIECVWLLLFLLSSTLLLYYTFLTETLYYCLIFLNPAVEPLGFWEV
LWVVGITNFTLKFLIMGFKCLILLLPSNLVTYRAQGRWYMLTEEVGQVYQAVAPSPLWFR
YLVTYQKVDGNTGLTLGVLLALVYFILKLLGLYGQWGSFQRTVRIFLSGEHTGAAATRSQ
CSEAGDICPICQAEYRDPRALLCQHIFCDECIALWFNREKMCPLCCTAITDKVHKWRDGA
TSPYLQIY
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtgttttctgtcgacttacttggtgaagagtgattccaaaagaacgttgaaatcgagg
gtatccccaactgtgatgcagcctaactccagtgagctgggtgtccatcaggcaggacat
ggtttgtctctgacgctactgaccaggacaccagcagggacttcagggggctctgctgtc
ccggagactagtggagcggtccgggtacctatcctctccagtgggtcctgggagtcatgt
agaggaggggcgtcatcccgtaggtccagagccagttccagaaccagttcccacagccac
tctcattcacatggtgggggacaccagcactcccacagtgagcccagtgaggtggacccg
gatgaagctgatctggagtcaggggagcccagcacctcattcttggagctccgctacctc
ttccgctgggttcagaagagtcttcctttcatcatcatcctttgtgctaaactggtcatc
caacatgccctaggtctagctgttggagttggcttatttacaacttttctttatgtgaat
aagaacattcaaacccaagtctttcttcaggatcgtcggtcaaagatagagtgcgtctgg
ctgctcctcttcctgttgtcctccacactcctgctgtactacacttttctcactgagaca
ctttactattgcctcatcttcctaaacccagctgttgagcccctaggtttctgggaggtc
ctatgggtggtgggaatcaccaacttcacactcaagttcctcatcatggggtttaagtgc
cttatcctactgctgccctctaacctggtgacctacagagcccagggacggtggtacatg
ctgactgaagaggtgggccaggtgtaccaggctgtggctcccagccccctatggttccgc
tacctggtcacctaccagaaagtggatggaaatactggcctcaccctgggagttctgctg
gctttggtctacttcatactcaagcttttaggattgtatggacagtgggggtctttccag
agaactgtgaggatatttctcagtggcgagcacacgggggcagcagccaccaggagccag
tgcagtgaggctggggacatctgtcctatctgtcaggcagagtacagagacccaagggcc
ctcctgtgtcagcacattttttgtgacgagtgcattgctctctggttcaaccgggagaag
atgtgtccactctgctgcacggccatcacagacaaggtccacaagtggagggacggggcc
acgtcaccttacctccaaatctactga
DBGET
integrated database retrieval system
