Oncorhynchus gorbuscha (pink salmon): 123994616
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Entry
123994616 CDS
T07892
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ogo04054
]
123994616
Pattern recognition receptors [BR:
ogo04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
123994616
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
TIR_2
LRR_4
LRR_5
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
123994616
NCBI-ProteinID:
XP_046153398
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All DBs
Position
LG14:20359782..20365779
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AA seq
941 aa
AA seq
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MRAMFSLFLLIQSVSGWMHPKCHVYNSEEYFPTWNYCPLAEQYTAACRDVTAVEEDLLGL
PSNINTLCISMKRGGNSSMSLGFFARFQYLEYLYIGGCFPQILPAGNSQGLQNLQHMYIN
GLVTGCCDCHIGPNTFRDLVKLSNLTIFNYRLSAMAPDVFHYIPQLQSVYIHEPCVENLS
EILCRIVNIISLTKLNVHAPNIQSLNQSNCSILKATESNLTSVNLDFSQINHIEEGALAC
LQNLTRFSGDLNQDVLLRLPLSGIKQIQLLYSYGRNSIDFESICNVVFLLSIKEIHVANV
NTSSLSMSSVELCIGLEYMGFDGPGAFHSSPHLKWNFISSLKNLKMLYVSGQTENSLDLC
SFREKPITWLTELTFMSSNVQTLFAKRFSCLENLRSLDLSCSFISNIEDFAFFGLANLES
LDMTQNSITQLYANTFVGLHSLTLLDLRENPQIYNIEAMSFAQLTCLRQVFLGYLNYAPR
EPVIKLNLTLVFGAVLSHLTHLYISSGMRPMQLIIGSNITSKQNLSLQLKGQTVSFEDCD
RPFFQSVTHLHADAEEFLCGSEFMGKYFRSVETFVYRSKLSAKSVDLTSMNQLIHLRKLT
LVQVDLLIQRSADIIFHNLTKLEVLKLSNCRIDSLEGGLTKDFKSLKTLYLRIENVFHVI
YSFTEPLSSLKYLILDTLQMFCSCDNAWLIAWAKGYRPVEVIMLNHEVMYNLEDLICLSD
NGLDTPNFVKYTEANCTTEVGFVLFAATGLGVIFFMLVVLVHNLAGPYLLPLYYIILGWL
SEAMRSNTRGRYHYDAFVSYSGKDERWVVEELLPNLEKRGPPFLRLCLHSRDFQLGKDIV
ENITDSLYRSRRTLCLVSRHYLHSNWCSLEMKLATSRLQVEQRDILLLVFLEKIPPRRLS
AHHRLARLVKTRTYLDWPQNPHQHQAFWDRLWAKLKPPTEA
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgagagccatgttttccctgttcctgttgattcagagtgttagtggatggatgcatcct
aaatgccacgtttataacagcgaggaatactttcccacctggaactactgtcctttggca
gaacagtacactgctgcctgtcgagatgtcacagccgtcgaggaggatctgcttggactt
ccctctaatatcaataccctctgcatatctatgaaacgtgggggaaatagttccatgtct
ctgggctttttcgctcgttttcagtatttggagtatctgtacattggaggctgttttcct
caaatccttccagctgggaatagccagggccttcaaaatctgcaacatatgtacattaat
ggattggtcactgggtgctgcgattgtcatattgggcctaacacattcagagatctagtc
aagctaagtaatttgaccatatttaattataggctatcagcaatggcaccagatgttttc
cattacatacctcaattacaaagtgtctatattcatgaaccctgtgtagagaatttgtca
gaaatactatgcagaatagttaatataatttcacttacaaagttaaatgtacatgcacca
aatatacaatctttaaaccaatcaaactgctccatcttaaaagctaccgaaagcaatcta
acaagcgtcaatttagatttcagtcaaataaaccatatagaggaaggtgcactggcctgt
ctccagaacctgacacgtttttctggggacctaaaccaggatgtcctactgcgccttccc
ctgtctggcattaagcaaatccagctcttgtattcttatggtaggaatagcattgatttt
gaaagtatctgtaatgtagtgtttttgctttcaatcaaggaaatacatgttgccaatgtc
aatacaagcagcctctccatgtccagtgttgaattgtgcattgggctggaatatatgggt
tttgatggacctggagcattccattcttctccccatttgaaatggaattttatttccagt
ctcaaaaaccttaaaatgttatatgtatctggccagacagaaaacagtcttgacctctgc
tcattccgagaaaaaccaatcacatggttaacagaactcactttcatgtcgagcaatgta
caaacgctttttgcaaaacggttcagctgtcttgagaacctgcggtctctagatttgtca
tgtagtttcatttcaaacattgaagactttgctttcttcggattggcaaacctggagtcc
ttagacatgacacaaaatagtataacccagttgtatgcaaacacgtttgtcggtttacat
agtttgacattgttagacctcagggaaaatccacagatctacaatattgaagcaatgtct
ttcgcacaacttacctgtctaagacaagtgtttctggggtacttgaactatgcaccaaga
gaacccgtgataaagctgaatctgacacttgtattcggtgccgttctgagtcacctgact
catctgtacattagttcaggtatgaggccaatgcagttgattattggcagtaacatcaca
tctaaacagaacctgagtctccaactcaaaggccagacggtgtcatttgaagactgtgac
agacccttctttcagtctgtaacccatcttcatgctgatgctgaagaattcctttgtgga
tctgaattcatgggaaagtacttcaggtctgtggagacatttgtgtacaggtcaaagctc
tcggctaaaagtgtggatttaacatcaatgaatcagctgattcacctgaggaaactgact
ctagtacaggtggatcttttaatacagcgttctgccgacatcatttttcacaacctgacc
aaactggaggttctgaaactttcaaactgcaggattgactctttggaggggggtttaact
aaagactttaaatccttgaaaacgttatatttgcgtatcgagaacgtttttcatgtaatc
tacagctttactgaacctctctctagcctaaagtatttgatacttgatacattacagatg
ttttgcagttgtgacaatgcttggctcattgcatgggcaaaggggtacaggccggttgaa
gtgatcatgcttaatcatgaagttatgtataatttagaggacttgatatgcttgtcagac
aatggactagacacacctaactttgtcaagtacacagaagccaactgcacaacagaggtg
ggctttgtgctctttgctgcgactggcctgggagtcatcttcttcatgctggtggtgctg
gtccataatctggccggtccttacctcctccccctctactacatcatccttggctggctg
tcggaggcgatgcgatcaaacaccagggggcgctaccactatgatgcgtttgtctcctac
agcgggaaggacgagcgctgggtggtggaggagctactacccaacctggagaagaggggt
ccccctttcctacgcctctgtctgcacagcagggacttccagctggggaaggacattgtg
gagaacatcacagacagcctctaccggagccgtcgcacactctgcctggtcagtcgccac
tacctgcacagtaattggtgctccctggagatgaagctggccacctccagactgcaggtg
gaacaaagggacatcctcctcctggtcttcctggagaagatcccccctcgcaggctgtct
gcccaccacaggctggctcgcctggtgaagaccaggacctatctggactggccccagaac
ccccatcagcaccaggcattctgggacagactttgggctaaactgaaacctccaactgaa
gcctga
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