Oncorhynchus gorbuscha (pink salmon): 123994682
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Entry
123994682 CDS
T07892
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04510
Focal adhesion
ogo04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123994682
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
123994682
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
OVT1
DUF948
Motif
Other DBs
NCBI-GeneID:
123994682
NCBI-ProteinID:
XP_046153536
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All DBs
Position
LG14:complement(24992186..25030760)
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AA seq
1781 aa
AA seq
DB search
MLILLITSLLTLWWRSFAQLPEFGDVCTEGSCYPATGDLLIGRAHQLTASSTCGIEKPER
FCIVGHLEEEKKCFVCDSREMYDERLNHTTSHSIENLVTTFAPNRLKTWWQSENGVENVT
IQLNLEAEFHFTHLIMTFKTFRPATMVIERSMDFGKKWQVYRYYSYDCESAFPGISVGPM
VKVDGIICDSRYSDIEPSAEGEVIFRVLDPAFEIDDPYSPRIQNMLKITNLRVQFSKLHT
LGDNLLDSRDEVTEKYYYALFDMVVRGNCFCYGHASKCAPVDGIHVGTEGMVHGHCMCNH
NTEGLNCEHCKDFYNDLPWRPAEGHNTNACKMCECNHHSRSCHFDMAVYLSTGNVSGGVC
DECQHETTGRQCEQCRPFYYQHPERHLRDPNICEPCSCDPAGSLQGGACDGRTDVSAGLI
AGQCRCKTSVEGERCDHCRQGHYGLGQGPNGCLQCTCNPLGTLPGGSPCDMDTGNCFCKR
LVTGRNCDQCLPRHWGLSNDMDGCRPCDCDQGGAVNNDCSPISGQCQCREHMYGRRCDQL
ESGYYFIALDHYTYEAEDAKHGPGVTVVPRPYPLNRSPTWTGAGFVNVPEGAHLEFHINN
LPDSMDYDVLIRYEPQLPEQWEQVEIRVIRPYSMRVGQPVSPCENTLPGGDQQSVSLPPG
SRHVMLLRPVCLDKGRNYTLRLSLPLYSSLSDVQSPYTLIDSLVLIPRVRELELFEGSQG
EEAWDTFQKYRCLESSQSVIKSPMTDICNDYIFSVSALLHQGAMACQCDSQGSLSAVCDP
RGGQCRCRPNMAGRNCDRCAPATFQFSPSGCRPCECNPVGSVNAFCHEATGQCECVPGAS
GRQCAHCLPGYWGFPQCRPCQCNGNSDFCHPQTGECQGCRASTTGHMCERCLDGYHGDPV
LGLGRHCRPCMCPDGPGSGRQYADGCYQTANNYQLVCVCSPGYRGARCDECAPGHYGNPQ
VPSGRCLPCQCSDNIDQLDPGSCDARTGVCLKCLHHTEGYGCQRCKLGYYGNAATQSCRR
CMCYSVGTTSEACPSPVECHCDLQTGQCPCRPNVIGQNCDRCAPDTFNIGSGQGCQTCDC
DRTHSFGTLCNELSGQCSCRPGFGGRKCNECRDKFWGDPEVKCQACDCDLRGIASEQCHR
SSGQCVCVEGVSGPRCNQCARGYHGEFPACQRCHQCFDEWDSVVGELTNQAQRLKDHVTE
LQTNGVTAPYTDTVSSLEISANAISGIVENNPAIQKMEDVQQMMQQVTEMVADLNERLNV
SEDSLSRLVVNANYTEASLDTLREQAQELERTVKDIGDRIQTVKNSNIEGAMDTITDAHL
ESKRAEIRVNQTTSYPDNTLEQSATLRREAEARLSQNQAEFDLRQQKHTERLERLSMELE
TLDLSELSKQTCGAAGGGEGCAASPCGGVGCVSEDGTHRCGGDGCDGLVTQTQSTLKTAK
DFDQEILSTMQEVDKLSRMVWEVKVHADEAKLSAREVLLKSNQSRDGVEHTNEQLRSLIK
EIRDLLTNDRANVEVIEAVSNEVLALKMPTSPGQLEALTKEIRDRVGTLTSVEDILSQSA
NDIHTTEKLLEQARTASQEASEVKETAALVKEALDTTKQAQNAAIDAVKQVYNNTRGTLD
LITSVESETAESELRLSNATLRLLQLERDVTLLRESSLDTSHRTQNTERLSETAKQDAER
ALQEFDSEVKGQYSIVEGLVMTKAVGVSDAKKRAELLQQEAKELLTQTSGKLQRLRELER
SYAANQRTLEAKAGQLAGLEKTARQLLDDISQKVMIYSSCS
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atgttgatattgctcatcacatcacttttgaccctctggtggcggtcctttgcgcagctg
ccggagtttggggatgtgtgcactgaggggagctgctaccccgccaccggggaccttctg
atcggccgtgcgcaccagctcacagcctcttccacctgcggcattgagaagcctgaacgc
ttttgcattgttggtcacctggaggaggagaagaagtgttttgtgtgtgactccagggag
atgtatgatgagaggctgaaccacacaaccagccacagcatcgaaaacttggtcaccacc
tttgcccccaaccgcctcaagacctggtggcagtctgagaatggtgtggagaatgtgacc
attcaactgaacctggaagctgagttccacttcacacatctcatcatgacctttaagacg
ttccgtccggctaccatggtgatcgagcgttccatggattttgggaagaagtggcaggtg
taccgttactatagctacgactgtgagtccgccttccctgggatatccgtgggacccatg
gtcaaagtggacggcatcatctgtgactcccgctactctgacatagagccgtccgcagag
ggagaggtgatattcagggtgctggacccagcgtttgagattgacgacccttacagtccc
aggatacagaacatgctgaagatcactaacctgcgtgtccagttcagtaagctccacaca
ctgggtgacaatctgctggactccagagacgaggtcacagagaaatactactatgccctc
ttcgacatggtcgtccgcggcaactgcttctgctacggacatgcctccaagtgtgcccct
gtcgatgggatacatgtaggcacagagggcatggtccatggtcactgcatgtgtaaccac
aacacagagggtctgaactgtgagcactgtaaggacttctacaacgacctgccctggagg
cctgcagagggacacaacaccaatgcctgcaagatgtgcgagtgtaaccaccactccagg
tcatgtcactttgacatggctgtgtatctgtctacggggaacgtgagtggaggagtgtgt
gatgagtgtcaacacgagaccacggggcgtcagtgtgagcagtgcagacccttctactac
cagcaccccgaaagacacctgagagaccccaacatctgtgaaccgtgtagctgtgacccg
gcgggctccctgcagggtggtgcatgtgacggccggacagacgtgtctgctggtctgata
gcaggacagtgtcgctgtaagaccagtgtggagggagagcgctgcgaccactgtagacag
ggacactacggcctgggacagggcccaaacggctgcctgcagtgtacctgtaaccctctg
ggaacgctacctggaggaagcccatgtgacatggacacaggaaactgcttctgcaaacgc
cttgtcaccggcaggaactgtgaccagtgtctgccgcgtcactgggggctgagcaatgac
atggacggctgcagaccatgtgactgcgaccagggcggcgccgtcaacaatgattgttcg
ccgatatcaggccagtgtcagtgtcgagaacacatgtatgggaggcgttgtgaccagctg
gagtcaggatactacttcatcgccctggaccactacacctacgaggccgaggacgccaag
cacggccctggtgtgactgtggttcccaggccctatcctctgaaccgtagtcctacctgg
acaggggcagggtttgtcaacgtacctgagggagcccacctggagttccacatcaacaac
ctacctgactccatggactacgacgtgctgatccgctatgaaccacaattgcctgagcag
tgggagcaggtggagatcagagtgatacgtccgtactcaatgagagtggggcagccagtc
agtccttgtgaaaacacgctaccaggaggagatcagcagtcggtgtctcttcctccggga
tccagacatgtgatgctcttgaggcctgtgtgtctggacaagggacggaactacaccctg
cgcctcagtctgcctctctactcctctctcagtgacgtccaaagcccctacacactcatc
gactctttggtgttgattccgcgggtacgtgagctggagttgtttgagggttctcagggc
gaggaggcgtgggatacgttccagaagtaccgctgtctggagagcagccagagcgtcatc
aagagccccatgacggacatctgtaacgactacatcttcagtgtgtctgccctgctacac
cagggggctatggcgtgccagtgtgactcccagggctcgctcagtgcggtgtgcgacccc
agaggcgggcagtgcaggtgtcggcccaacatggcgggcaggaactgtgaccgctgtgcc
cccgccaccttccagttcagcccctcaggatgccgaccctgtgagtgtaaccctgtgggt
tctgtgaacgctttctgccacgaggccacaggtcagtgtgagtgtgtgccaggggcatca
gggcgtcagtgtgcccactgcctgccaggctactggggcttccctcaatgccggccctgc
cagtgcaacggcaacagcgacttctgccaccctcagactggggagtgccagggctgccgc
gcctccaccaccgggcacatgtgtgaaaggtgtctggatggttaccacggcgacccagtg
ttgggtttggggcgtcactgccgcccctgcatgtgtccagatgggccggggagcggacgc
cagtatgcagacggctgctaccagaccgccaacaactaccagctggtctgtgtctgcagc
cctggatacagaggagccaggtgtgacgagtgtgccccaggacactatggtaacccccag
gtgcccagcgggcgctgtctgccctgccagtgtagcgacaacattgaccagctggacccg
gggtcctgcgacgctcgcacaggcgtctgcctcaaatgcctgcaccataccgagggctat
ggctgccagcgctgcaagctgggttactacggcaacgccgccacccagagttgcaggagg
tgtatgtgttattcagtgggcacgacgtcggaggcgtgtccatccccggtggagtgtcac
tgtgacctgcagactggccagtgtccctgccggcctaacgtgattggccagaactgtgac
cgctgtgcccctgatacgttcaacataggaagcggacagggctgccagacctgtgactgt
gaccgaacccactcctttgggacgttgtgcaacgagctgtcggggcagtgctcatgcagg
cctggtttcgggggaagaaaatgcaacgaatgccgagataagttctggggagatcctgag
gtcaaatgtcaagcgtgtgactgtgacctgcgtggcatcgccagcgagcagtgccaccgt
tcgtccggccagtgtgtgtgtgtggagggtgtgtctggaccccggtgtaaccagtgtgcc
agagggtaccatggggagttccccgcctgccaacgatgccaccagtgcttcgacgagtgg
gacagcgtggtaggggaactgaccaaccaggcgcagcgtttgaaggatcacgtgacagag
ctccagaccaatggggtgacggcgccgtacacagacaccgttagcagtctggagattagt
gctaatgctatcagtgggatagtagagaacaaccctgctatacagaagatggaagatgta
caacagatgatgcagcaggtcactgagatggtggcagacctgaacgagaggctgaacgtc
tcagaggattccctgtcccgtctcgttgtcaatgccaactacaccgaggccagtctggac
acactgagagagcaggcccaagagctagagagaacagtcaaagacattggagaccgcata
cagactgtgaagaactctaacattgagggagcgatggacaccatcaccgatgcccacttg
gagtctaagagggcggagatccgtgtcaatcagaccaccagttaccccgacaacactttg
gagcagtcggctacgctacggcgcgaagcggaggccagactgagccagaaccaggcggag
tttgacctgagacaacagaaacacacagagagactggagaggcttagcatggagctcgaa
actcttgacctatcagagctcagcaagcagacatgtggagcggctggtgggggggagggg
tgcgctgcgtcaccctgtggaggggtggggtgtgtgtcggaggacggcacccatcgctgt
ggaggagacgggtgtgacggtctggtcacacagacacaaagcactctgaaaacagccaag
gacttcgaccaggaaatcctgtccaccatgcaggaagtggataagctctctagaatggtg
tgggaggtgaaggtgcatgcggacgaggccaagctgagtgctcgggaggtgctgctgaag
tccaaccagagccgagatggagtggagcacaccaacgagcagctccgcagcctcatcaag
gagatacgagacctactcactaacgaccgtgccaacgtggaggttatcgaagcggtgtcg
aacgaggtgttggccctgaagatgcccacgtcgcccgggcagctggaggccctgaccaag
gagatcagagacagagtgggaaccctcaccagcgtggaggacatcctcagtcagagtgcc
aacgacatacacactacagagaagctgctggagcaggctcgcactgccagtcaggaggcg
tctgaggtgaaggagacagctgccctggtgaaggaggctctggatacaactaagcaggct
cagaatgctgccatcgacgccgtcaagcaggtctacaacaacaccaggggtacacttgac
ctcatcacgtctgtggagtcggagactgcggagtcagagctgcgtctgagtaatgccaca
ctgcgtctgctgcagctggagagagacgtgactctgctgagagagagcagcctggacacc
agccaccgcacacagaacactgagagactgtctgagaccgccaagcaggacgcagagcgg
gccctgcaggagtttgactcggaggtgaagggtcagtacagtattgtggagggcttggtg
atgacaaaggcagtgggcgtgtctgatgccaagaagagagcggagctactccagcaggag
gccaaggagctgctcacccagaccagcggaaaactacagagactcagagagttggagagg
tcgtatgcagccaaccagcgtactctagaggccaaggcaggtcagctggccgggctggag
aaaacagcacgccagctgctcgatgacatcagccagaaagtcatgatctacagctcctgt
tcttag
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