KEGG   Oncorhynchus gorbuscha (pink salmon): 123994691
Entry
123994691         CDS       T07892                                 
Name
(RefSeq) transportin-3-like isoform X1
  KO
K15436  transportin-3
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03013  Nucleocytoplasmic transport
ogo03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    123994691
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    123994691
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ogo03016]
    123994691
Transfer RNA biogenesis [BR:ogo03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    123994691
SSDB
Motif
Pfam: TPR_TNPO3_IPO13_4th TPR_TNPO3_IPO13_3rd TPR_TNPO3_IPO13_2nd Xpo1 IBN_N
Other DBs
NCBI-GeneID: 123994691
NCBI-ProteinID: XP_046153548
LinkDB
Position
LG14:complement(25582706..25601910)
AA seq 927 aa
MEKPTVALVYQAVQALYHDPDPAGKERASVWLGELQRSMYAWELADQLLQLKQDVESCYF
AAQTMKMKIQMSFFELPPETHIALRDSLLSHIQSLKDLSPIIVTQLALAIADLALQMASW
KGCVHTLIEKYSNDVSSMTFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSSTVVT
LLMTCVEKSGSNEKMLIKVFRCLGSWFNLGVLDSNFMANNQLLMVLFQVLQRDETSTNLH
EAASDCVCSALYAIENVDTHMPLAQQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFTEL
CETFLETTVRSPGQGMGDLRTLELLLICAGHPQYEVVEISFNFWYRLGENLYKTNDPALH
GIFRPYIQRLLHGLARHCQLDPDHEGIPEDTDDFGEFRMRVSDLVKDVIFLVGSMECFSQ
LYSTLKEGNPPWEVTEAVLFIMAAIAKSVDPENNPTLTEVLEQVVLLPETVHIAVRYTSI
ELVGEMSEVVDRNPRFLAPLYVTDPVLNYLMKGLREKTLASVAAKAIHNICSVCRDHMAQ
HFQGLLDIARALDSFALTTEAAVGLLKGTALVLARLPLEKIAECLSDLCAVQVMALKKLL
SQDPRNGKAADPTVWLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNTHQADN
RIVERCCRCLRFAVRCVGKGSASLLQPLVTQMVSVYQVYPHSCFLYLGSILVDEYGMEEG
CRQGLLDMLQALCMPTFQLLEQTNGLRNHPDTVDDLFRLATRFVQRSPITLLSSGIIVHI
IQCAIAATTLDHRDANCSVMKFVRDLIHTGVSNDHEDDFELRKQLIGQAMGQHGQQLVTQ
LMHTCCFCLPPYTLPDVAEVLWEIMVFDRPTFCRWLENALKGLPKETSGGAVTVTHKQLT
DFHKQVTSAEECKQVCWAIREFTRLFR
NT seq 2784 nt   +upstreamnt  +downstreamnt
atggagaaaccgacagtcgcacttgtgtatcaagctgttcaggctctttatcatgatccg
gaccccgccggcaaagagcgagcctctgtgtggctgggggagctacagagatcgatgtac
gcgtgggagttggcagaccagctcctccagctgaaacaggatgtggaatcttgttacttt
gccgcccagaccatgaagatgaagatccagatgtcgttctttgagcttcccccagagacc
catatcgccctccgagactccctgctctcacacatacagagcctcaaagacctctccccc
atcatcgtcacccagctcgctctggccattgcagacctcgccctacagatggcctcctgg
aagggctgtgtccacaccctcattgaaaagtatagcaatgacgtcagctccatgacgttt
ctgatagagatccttacagtgctccccgaggaggtccacagccgctccctacgcatcgga
gccaatcgcaggacagagatcatcgaggacctggcctattactccagtactgtggtcacc
ctactgatgacgtgtgtggagaagtctggcagcaatgagaaaatgctgatcaaggtgttc
cgctgtctgggcagctggttcaacctgggagtcctggacagcaactttatggccaacaac
cagctcctcatggtccttttccaagtgctgcagagagacgagacgtccaccaacctgcac
gaggccgcgtccgactgtgtgtgttcagcgctgtacgccatcgagaacgtggacacgcac
atgcccctggcccagcagctcttccagggcgtcctcacgctggagacagcctaccacatg
gccgtggcacgggaggacctcgacaaagtgttgaattactgtaggatcttcactgagttg
tgtgagacgtttctggagacgacagtcaggagtccaggccagggcatgggagacctgcgg
acgcttgagctactgctcatctgtgcaggacaccctcaatatgaggtcgtggagatctcc
tttaacttctggtatcgtctgggagagaacctgtataagaccaacgaccctgccctccac
ggcatcttcagaccctatatccagagactgctgcacggcctggcccgccactgccaacta
gaccccgaccacgagggcatcccagaagatactgatgactttggggagttcaggatgagg
gtgtctgatcttgtgaaggatgtcattttccttgtgggctccatggaatgtttctcccag
ttgtactccactctaaaagaagggaaccctccctgggaggtgactgaggctgttctcttc
atcatggccgccatcgccaagagtgtagaccctgagaacaaccccaccctgacagaggtg
ttagagcaggtggtgctgctgccagagactgtccatatcgccgtgcgctacaccagcatt
gagctggtgggggagatgagcgaggtcgttgaccgcaacccgcggttcctagccccgctc
tatgtcacagaccccgtgctgaactacctgatgaagggcctgagggagaagaccctggct
tccgtggcggccaaggctatccataacatctgctctgtgtgtcgggaccacatggcccag
cacttccagggcctgctggacatcgcccgtgccctcgactccttcgccctgacgaccgaa
gccgccgtaggcctcctcaaaggtacagccctggtcctggctcgcctgcccctggagaag
atcgctgagtgtttgagtgacctgtgtgctgtgcaggtcatggccctcaaaaagcttctc
tctcaggaccccaggaatgggaaagctgctgaccccactgtctggctggacagactagcc
gtcatcttccgacacacaaaccccatcgtagagaatggacagacacacccatgtcagaaa
gttatccaggagatctggccggtcctatcagagactctgaacacacaccaggctgataac
cgcatcgtggagcgctgttgtcgctgcctgcggtttgctgtgcgctgtgtgggcaagggc
tctgcctctctactacagccactcgtcacacagatggtcagtgtgtatcaggtgtatccc
cactcctgcttcctgtatctgggcagcatcctggtggatgagtacggcatggaggagggc
tgcagacaaggtctactggacatgctgcaggctctttgtatgcccaccttccagctattg
gagcagaccaacggcctccgtaaccacccagacacagtagatgacctcttcagactcgct
accaggtttgtccagcgtagtcccatcaccctgctcagcagtggcatcatcgtccacatc
atccagtgtgccatcgcggccacgacactggaccaccgggatgccaactgcagcgtcatg
aagtttgtcagagacctcatccacacgggcgtcagcaacgaccacgaggatgactttgag
ctgcggaagcagctaataggccaggccatggggcagcacgggcagcagttggtcacccag
ctcatgcacacatgctgcttctgcctgccaccttacacgctccccgatgtggctgaggtg
ctctgggagatcatggtgttcgacaggccgacgttctgccgctggctggagaacgcgctg
aaggggcttcctaaagagacgtcaggcggggcggtgaccgtcacacacaaacagctcaca
gacttccacaagcaggtcaccagtgcagaggagtgtaagcaggtgtgctgggctatccgg
gagttcaccagattgttccgatag

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