Oncorhynchus gorbuscha (pink salmon): 123994773
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Entry
123994773 CDS
T07892
Name
(RefSeq) lissencephaly-1 homolog B
KO
K16794
platelet-activating factor acetylhydrolase IB subunit alpha
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo00565
Ether lipid metabolism
ogo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09100 Metabolism
09103 Lipid metabolism
00565 Ether lipid metabolism
123994773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
123994773
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogo04147
]
123994773
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
123994773
Exosome [BR:
ogo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
123994773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
EIF3I
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR75_1st
Beta-prop_EML_2
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_IFT122_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_Nup120_160
Beta-prop_Vps41
WDR90_beta-prop_4th
Beta-prop_EML
LisH
Beta-prop_SPT8
LisH_PAC1
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
Nucleoporin_N
Beta-prop_NUP159_NUP214
Pox_A_type_inc
Beta-prop_WDR11_2nd
ARMC9_LisH
KH_GLD-3_2nd
DUF2570
SutA-RBD
LisH_2
LisH_WDR26
Motif
Other DBs
NCBI-GeneID:
123994773
NCBI-ProteinID:
XP_046153716
LinkDB
All DBs
Position
LG14:complement(30439494..30484919)
Genome browser
AA seq
410 aa
AA seq
DB search
MVLSQRQRDELNRAIADYLRSNGYEEAYSTFKKEAELDMNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEITLGGPVAQKRDPKEWIPRPPERYALSGHRSPVTRVIFHPVF
SVMVTSSEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGSLIASCSNDQTVRVWVATSKECKAELREHEHVVECIAWAPDTAHPTILEATSSE
SKKNGKSGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLVHPGGRFIVSCADDK
TLRIWDYKNKRCMKTLCAHEHFVTSLDMHRTAPYVVTGSVDQTVKVWECR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgtcacagagacaacgagacgaactaaaccgagctatagcagactacctacgc
tccaatggctatgaggaagcctactccaccttcaagaaagaggctgaattagatatgaat
gaggagttagataagaagtacgctggtcttttggaaaagaaatggacctctgtcatcaga
ttacagaagaaggtgatggagctggagtcgaagctgaatgaggccaaagaggagatcact
ctagggggtccggtggcccagaagagggaccctaaggagtggatcccccgtcccccagag
agatacgccctgagcggccaccgctcccccgtcacacgggtcatcttccatcctgtcttc
tccgtcatggtcacctcctctgaggacgccaccatcaaggtgtgggactatgaggcaggg
gactttgagcggacactgaagggccatacagactctgtccaggacatctcctttgaccag
acgggcaagctgctggcttcttgttctgcagacatgaccatcaagctgtgggacttccag
ggcttcgagtgcatccgcaccatgcacggtcatgaccataacgtgtcgtctgtagccatc
atgcccaacggagaccacatagtctccgcctccagagacaagaccatcaaaatgtgggag
gtggccactgggtattgtgtaaagacatttacaggccacagggagtgggtgaggatggtc
cggcccaaccaggatggttctcttatcgccagctgttccaacgaccagacagtgcgtgtg
tgggtggccacctccaaggagtgtaaggctgagctgcgagagcacgaacacgttgtggag
tgtatcgcatgggcccccgataccgctcaccctaccatcctggaggctaccagctcggag
agtaagaagaatgggaagtctggtccgttccttctctctggctctagagataagaccatc
aagatgtgggacatcagcactggcatgtgccttatgactctggtgggtcatgataactgg
gtgcgtggtgtgttggtgcaccctggaggcaggttcatagtgagctgtgctgatgataag
actctgaggatctgggactacaagaacaagcgctgcatgaagaccctgtgtgcccacgaa
cactttgttacctctctggatatgcaccggactgctccatacgtggtaacaggcagcgtt
gatcagacagtcaaagtgtgggagtgtcgctga
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