Oncorhynchus gorbuscha (pink salmon): 123994817 Help Entry 123994817         CDS       T07892                                  Symbol col4a3 Name (RefSeq) collagen alpha-3(IV) chain   KO K06237   collagen type IV alpha Organism ogo  Oncorhynchus gorbuscha (pink salmon) Pathway ogo04382   Cornified envelope formation ogo04510   Focal adhesion ogo04512   ECM-receptor interaction ogo04518   Integrin signaling ogo04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ogo00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     123994817 (col4a3)    04518 Integrin signaling     123994817 (col4a3)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     123994817 (col4a3)   09142 Cell motility    04820 Cytoskeleton in muscle cells     123994817 (col4a3)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     123994817 (col4a3)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:ogo04147]     123994817 (col4a3)    00536 Glycosaminoglycan binding proteins [BR:ogo00536]     123994817 (col4a3) Exosome [BR:ogo04147]  Exosomal proteins   Exosomal proteins of other cancer cells    123994817 (col4a3) Glycosaminoglycan binding proteins [BR:ogo00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    123994817 (col4a3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  123994817 NCBI-ProteinID:  XP_046153785 LinkDB All DBs Position LG14:33603634..33715717 Genome browser AA seq 1669 aa AA seqDB search MTYFLTFSPLLLSVLLLLLSGIITPAYTDDVCSCTGKSRCHCDGVKGSKGEPGYPGYDGL PGVVGYPGSEGNPGPFGPKGNLGFPGLSGPKGSLGLPGKPGFSGPPGQPGIPGNEGPMGP SGTPGCNGTKGDSGYPGLPGVPGPVGLPGVHGLPGFKGDSYYFPPAAEVDGHLGPQGRDG VKGQRGLPGRPGLPGLEGPSGTPGLPGLTGVQGEKGQEGPSPVIPGPRGQKGDQGPPGIP GQKGIKLYAEGPKELKGEPGDTGEKGCTGQHGLPGRRGYKGNKGDQGEPGALGKPGKDGD PGTYGIQGEKGDVGYQGPPGTEGSMGDKGDRGPTGPPGDLIQINGRIKGLQGFPGPLGPP GYTGNQGVIGFPGMKGEPGLSFPGAPGNPGPPGLAGDKGERGEPAPYIIGPPGPTGPPGN DGPIGDRGPPGIPDLLRGNPGPPGPKGIKGISGQPGDRGGFGETGEKGDVCRLCMHTNVS PGPPGPAGEPGRPGDTGRDGDPGSKGSRGVKGLGGPPGPQGPYGIPGVPGSTGPKGDKSP MSPGDRGPVGSPGAPGVPGSDGTDGVPGYPGLKGQPGLKGNPGPPGPKGDRGDAGSQGIH GRTGQMGTQGPPGVGPPGSPGQKGNLGVQGLRGRPGDPGEKGSAGETVTTTGDPGLKGEK GHQGNPGPSGNPGINGYPGFPGNFGAKGDRGLSVRGPPGNTGPKGEKGQPGVAGAPGIGS MGRPGPSGAPGMPGPKGDFRPGLPGLPGRPGPPGEDGSLGLTGDSGLPGLGRSPGLPGRD GPQGDRGSKGAEGLPGLPGVAGECTLGIPGTPGAVGLKGIIGLTGTRGQKGVQGDSGLPG RGAPGLIGPFGRPGFDGPPGPGGVAGLNGFRGRDGVPGVPGLRGDMGPSGACGTPGADGG PGPGGRLGPKGLMGADGVKGRVGARGPVGDSGAPGDIGVTTYIEVPGDPGDPGPTALRGL TGAKGDQGVIGHNGASGKDGIPGSAGPQGAVGDQGRDGQKGSPGFNGNPGVAGDMGVPGV KGEKGGTGGRGEPGSSGRPGPNGVNGVKGEPSLPGPGAKGRQGEKGVPGFPGFPGEKGEM GVAGRFGTLGAIGPTGPKGREGLQGSRGPPGPAGEKGINGLPGNAGCHGQNGLQGSPGLA GDPGTAGPRGSQGRDGIPGPAGEKGDMGAPGIGPKGTDGQTGQSGLKGDVGIPGRFGPPG PSGLLGDIGPPGPPGPMGLSGSPGRDGMCFEGLKGDRGQNGVPGPQGMQGPRGPPGPPGP GFKGDKGNKGAMGLLGTPGYRGDTGVQGRPGNDGRPGGLGVKGEMGQLGDIGPNGQKGDA GPAGPVGCLGQKGQSGAPGPRGKDDLTMVVLIPGEQGLPGDLGGRGEPGPTGAQGRNGPP GLPGPKGVLGLDGPIGLPGFQAAKGDRGFPGPQGIQGEQGTPGAKGPRGSPGPYFAGPIE DGFLFTRHSQRQNVPQCPGGSNFIYSGYSLLFINGNNRGHGQDLGTLGSCLPRFSTMPFL FCNTDSTCRYASRNDYSYWLSTDEAMPSDMALISGGSLESYVSRCAVCETKANIIAVHSQ TNQIPVCPRGWLSLWAGYSFVMQTGAGAEGSGQPLASPGSCLEEFRKIPFIECHGRGTCN YYTDSYSYWLASLDPENMFSKPRPQTVKGDCPGSIVSRCQVCMKQWQRP NT seq 5010 nt NT seq  +upstreamnt  +downstreamnt atgacatactttctcactttttccccactgctcctgagcgtcctgttgctactgctcagc ggcatcatcacgcctgcatacacagatgatgtgtgtagctgcaccggaaagtccaggtgt cactgtgatggagtaaaaggcagtaagggtgagcctgggtatccaggttatgatgggttg ccaggagtggttggttatccaggttctgaaggtaatcctggaccttttggccctaaggga aatcttggctttcctggattgtcaggacccaaaggctcactgggtctccctgggaaacct gggttctctggaccacctgggcagccaggaatcccaggaaatgaaggaccaatggggcca tcaggaaccccaggatgcaatgggacgaagggggacagtggatacccagggttacctggg gtgccgggacctgttggattaccaggtgttcatggattgccaggatttaagggagactcc tactacttcccacccgctgctgaggttgatggacatcttggaccacaagggagagatggt gtcaagggtcagcgagggttacctggacggccgggtcttcctgggctggagggaccgagc gggactccaggattacctgggttaacaggtgtacagggagagaagggccaggaaggtcca agccctgtaattccaggcccaagaggtcaaaagggtgaccaaggccctcccgggatacct ggacagaagggcataaagctgtatgcagagggacccaaggaactgaagggggagccaggt gatacaggagagaaggggtgtacaggccagcatggtctccctgggcgtcgtggatataaa gggaacaaaggcgaccaaggagaacctggggctctggggaaacctgggaaagatggggac cctgggacctatggaattcagggtgagaaaggtgatgtgggctaccagggacctcctgga acagaaggttcaatgggtgacaaaggtgaccgcggacccacaggtcctccaggggatttg attcagatcaatgggagaatcaaaggcttgcagggttttcctgggcccctcggaccccct ggctatactggtaatcaaggtgtgattggttttcctggaatgaagggggaaccagggttg tctttccctggggcccctgggaatcctggtccccctggtttagctggggataaaggggag aggggggagcctgccccctacataattggcccccctggacccactggcccccctggaaat gatggccccataggcgaccgtggtccccctggaattccagatctgttgagaggcaaccct ggaccacccggtcctaaaggcatcaaaggcatctcaggacaaccaggagatagaggcggg ttcggagaaacaggtgagaagggtgatgtctgtcgactctgcatgcacactaatgtgagc cctggaccaccaggacctgccggagagcctggtaggcctggagatacaggtcgagatggt gatcctggatccaagggatctagaggagtcaaaggtcttggaggtccaccaggtccacag ggtccctatggtataccaggtgtgccaggttctacaggacccaagggcgacaaaagtccc atgtccccaggagacagggggcctgttggctcacctggggctccaggagttcctgggagc gatgggactgacggggtccctggatacccaggactgaaaggccagcctgggctaaagggc aaccctggacctccggggcccaagggtgatcggggcgatgccggctctcagggtatacat ggacggacaggccagatggggactcagggccccccaggtgtggggcccccagggagccct ggacagaagggcaacctgggggtgcaaggcctgcgagggagacctggagatccaggagag aaaggctcagcgggtgagacggtaacaaccacaggagacccaggactgaagggagagaag ggtcatcaaggcaacccaggaccttcagggaatcctggtataaatggctatcctggcttc cctggcaatttcggcgccaagggggatagaggtctgtctgtccggggccctcctggcaac actgggcctaaaggtgagaagggccagccgggggttgctggtgccccagggattggtagt atgggacgaccaggaccatccggagctcccgggatgccaggccctaagggtgatttcaga ccagggctcccagggctgccaggtagaccaggccccccaggggaggatggttctctgggg ctgactggagactctggtctgcctgggcttggtagatcgcctggcctaccaggaagagat ggtccacagggagacagaggcagtaaaggtgctgagggcttgcctggtctgcctggggtt gctggggagtgtacgctaggcattccaggcactccgggggctgtaggtctcaaaggaatc attggtttaacagggaccagaggacagaagggggtgcagggcgattcaggtctgcctggc agaggggccccaggattgattggtccgtttggacggcccgggtttgatggacccccggga cctgggggggttgccggcctgaatggattcagaggaagagatggtgtacctggggtacca ggcctgagaggagacatggggccatcaggagcgtgtggtacaccaggagcagacggaggc ccaggaccagggggacgacttggccctaaaggtctgatgggtgctgatggggtgaagggc cgtgtaggagccaggggacctgtgggagattctggggctcctggagatattggagtcaca acatacatcgaggtccctggggaccctggggacccaggacctacagctctaaggggctta acaggtgccaaaggagatcaaggtgtgatagggcacaatggagccagtggcaaggatggg attcccgggagcgccgggccgcaaggtgctgttggcgaccaaggcagagatggccagaaa ggaagtcctggtttcaatggaaatcctggagtcgcaggagatatgggtgtgccaggtgta aagggtgagaaagggggaacaggaggtcgtggagagcctggttcatcgggaagaccaggt ccaaatggagtaaatggagtgaaaggagagcccagcctccctggaccaggagctaaagga cgacaaggagaaaagggagtgccagggtttccaggttttccaggagagaagggggagatg ggtgtagcagggaggttcggaaccctgggggccattggccccacaggacccaagggaaga gaaggactacagggatcacgaggacctccgggaccagccggggaaaagggcattaatggt ctcccaggcaatgctggctgtcatggccagaatggccttcaagggagcccaggattggct ggtgacccagggactgcaggccccagaggttcccagggtagagacggcatccctggccca gcaggagagaaaggagacatgggagcccctggcattggaccaaaaggcacagacggacag acgggccaatctggacttaagggggatgtggggatacctggccgctttggccctcctggt ccctcagggcttttgggggacattggacctccaggcccccctggtcctatgggactgtct ggaagtcctggccgggatggaatgtgctttgaagggctaaaaggagaccgtggacaaaat ggtgtccctggaccccaaggtatgcaggggccacggggacctcctggtccaccaggacct ggctttaaaggagataaagggaacaaaggtgccatgggtctcctgggtacacctgggtac agaggagacacaggggtacagggcagaccgggtaatgatggcagaccaggtggtttggga gtcaaaggggagatgggacagttaggagacatcggaccaaacggtcagaaaggagatgca ggacctgccggacctgtaggttgccttggacagaaagggcagtctggagcaccagggcct agggggaaagatgatctcaccatggtcgtactgatccccggagaacaagggctgccgggt gacctggggggcagaggagagcctggacccacaggagctcagggacgcaacggaccacca ggactcccaggtccaaaaggtgtcttgggcctagatgggccaataggactgcctggattc caggcagccaagggagacagagggttccctggaccacaaggtatccaaggtgagcagggg actccaggagccaaaggcccccggggctctccaggtccttactttgccgggccaatagag gacggcttcctattcacccgtcacagccagaggcagaatgtgccccagtgcccagggggc agcaacttcatctactccggatactccctcctcttcatcaacggcaacaacagaggtcat ggccaggatctgggtacactgggaagctgtctgcctcgtttctctaccatgcccttctta ttctgcaacacggacagcacgtgccgctacgcctcccgtaacgactactcctactggctg tccacggatgaggccatgccaagcgacatggccctcatctctggtggttcactggagagc tatgtcagcaggtgtgcagtgtgtgagaccaaagcaaacatcatcgctgttcacagtcag accaaccagatccctgtttgtccacggggctggctctctctctgggctggctactctttt gtcatgcaaacaggggctggagcggagggctctggccagcccctggcctctccgggctcc tgcctagaagagttccggaagattcccttcattgagtgccatgggcgagggacatgcaac tactacactgactcctacagttactggctggcctccctggaccccgaaaacatgttcagt aaacccaggcctcagacagtgaagggagactgcccgggtagtatagtcagtcgttgtcag gtctgtatgaagcaatggcagcgaccctaa

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