Oncorhynchus gorbuscha (pink salmon): 123994924
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Entry
123994924 CDS
T07892
Name
(RefSeq) CASP8-associated protein 2-like isoform X1
KO
K25593
CASP8-associated protein 2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
123994924
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
123994924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding_7
Myb_DNA-binding
SHE3
Myb_DNA-bind_4
MscS_porin
Motif
Other DBs
NCBI-GeneID:
123994924
NCBI-ProteinID:
XP_046153996
LinkDB
All DBs
Position
LG14:39599850..39610876
Genome browser
AA seq
2061 aa
AA seq
DB search
MEGDLMDEVYGDLSQDHHNTTPAFNEDSVDIYFGLESPKMNSNAERNYTLLSPQNLKYMD
LYEEIITEEQQDRESSYNELRTRFNAAQSQVDELMRRLQQTETQNTTLNTENSRLKKNIC
ALIKTAKMEVVRKDEEINRLSQSFRPRRGPVVHHQSQMNCLRNPIPNRLNPTGPSQLSQP
QVPNRLNPTGPSQLSQPQVPNRLNPTGPSQLSQPQVPTRLNPTGPSQPSQPQVPNRLNPT
GQSQPSQPQVPTRLNPTGPSQLSQPLVPTRQNITGQPPPSQPPGPRQDCVVKDLSQLLCK
DRDVVHPLLPPTPSDATVFRPPLPDTTVVRPPLLDATVLRPPLPVTSKTAKGDSEAPVKR
TVGSSSQDCVNRHPTRELDPSDEPKQTKHREGGGGNPRLSDSNEQRKYNSKSSRCPRLSD
VEVRRRSERAKNPTSDILHCTASSDRTSEGLSKDCAAYQSKGSSRHYQELRRDKGDGNRH
SRGTKDISSNRKHACESFNRKGGTSPPRDRQRKEERRREDEVRKEKNTSKKSGERKSTCT
ERRRTKESGRCSKDKTMDDSKVGGQRTGEKSEFLPSEAKVAAKSSVEETGPNRKLSFMET
LNLTLSPVKKPRQRAETKEREGTPPEEVSEDQSAEDSGQPDLDKLLILDEINSSVVETDE
VFEDPVVQPTSEIPMPSEPGSIDLRHTDKEPCQDANKGLTEATVAKKQPKCQLEVEDTIV
QGVSEGKPELPEATVDQRTEPTTPEPLREVCVSAPDCAIVLRTPLKSRPEECASANKSSE
SEDFTAAAVTALTVAGNCGNNSNTDTGLSSNGFTPDHSKENVVLITDNRVCKPNGKTPSA
LVCESQAVETVTHVPPAAVCVGHPAVEGVSGKEPSESLQLPLPASVISTSSLDVTAEVQD
ISKHGVSSTISMEVIPEICIPSEIVEDATEIPLECEKERTVVEQGSPLSGFEVSKVSSTT
GEVAPSAQHNSGLSQTPKKSLDSEPSHTENEDMNVEPSSSIPLAHDENSMMLTLGSLKGI
PDAISPLTSPVRPMRKSHQPPCHSKPAYVKSLRKEFTSAAGDPNSKKLDVNMENKNPGRS
IASATQQAVDRASVRSSSPEDELEEGEILSEGEETPSSPAKTVRPTSPVKSQQIPKSSPR
LSKKSLEEKGNSKLLSKTLISPVRSPMSKSRYKTVQPPLPKAALCTVEEVMAMFVKIRYA
CRKKYMKLRSTFSKERFCGVMDMSLDSFTDFVDSVSFTKLCSQEDDLKVKLKNNIMSVLS
KLSNNGIVNRIFDQEPLNMKSKLWEFVNVQLDFLFKEIQTALRSVCKSSNGNQSAGAEKR
DLSLSKQPVKSPKQPVKSPKQPVKSPKQPVKSPKQPVKSPKQPVMSSVSTASKLKRPQGA
VQKTNCVSRTSASKRPQEELTDCVEPNIKRNRAQTLPPCKTGLGRGKNIKMSFEEDKESE
PQTSDHPLMQPPLQHGLEILSSNSPSSAEKTAAYVRRLSQNGSLHDKSDFEILTEQQASN
LTFNLVTDSQMGEIFKCLLQGSDLLETNVSAGDNHGWPLGTPRKGERFRGVTTPSKVCTT
TKVGSPSKVIATWSSISPCKFSSPNSKVQIPLNPALLDESCMLEVPSSLPEDKMTLQSSV
FSQRSYSILAEDLAVSLTIPSPLKSDNHLSFLHPASVEPMAAPDSVISAHFSEDALMDGE
DATEQDIHLALDTDNSSGASSGGGRTREAPVNPLFHFKPHLPMQAVVMEKSNDHFIVRIR
HANTSPDINSNNSGVNFTNLGINCTNPGINFSNLGNNSTSLVVNPTCRGIKSTSQGVNSS
SPGSVNSTYPGNNSTNKDTNSSYPCVNSTSPQVNCTNPVIYPIRADINPRAVSGPQTPPG
EEQHGKDQGKTPSKTHFSEASPPFYLSTGTETASALSSPCLTIIEDTPERDHSKGKTGKK
RTRHHVEMKAKRPKKDVIPEKIKHKNKSSKRAKGKETRSSKSERSKVTTPPQSTPSPNSL
SAKNIIIRKGAVVVTWTRDEDRDILLALKMKGASPDTFSSLSEKMNKTPAQIAERFSQLM
KLFKKKKMMSQGQGSNFPFDE
NT seq
6186 nt
NT seq
+upstream
nt +downstream
nt
atggagggggatttgatggatgaagtgtatggtgacctcagccaagaccaccataatacc
acaccagctttcaatgaagactctgtggatatttattttggtttagaaagtccaaagatg
aattcgaacgcagaaaggaattacacactcctctcaccacagaatctgaaatatatggat
ttgtatgaagaaatcataacagaagaacagcaggatagagagtcttcctacaatgagttg
aggaccagattcaatgcagcacaaagccaagttgatgagttaatgagaaggttgcagcag
actgaaacacagaatacaacgctgaacaccgagaacagccgcctgaagaagaacatctgt
gcgctcatcaagaccgctaaaatggaggttgtgcggaaggacgaggagataaataggttg
agccaaagtttcaggccaaggaggggtcctgtagttcaccatcaatctcagatgaactgc
ctgagaaatccaattccaaaccgactgaatcctacggggccgtctcaacttagccaacca
caagttccaaaccgactgaatcctacggggccgtctcaacttagccaaccacaagttcca
aaccgactgaatcctacggggccgtctcaacttagccaaccacaagttccaacccgactg
aatcctacggggccgtctcaacctagccaaccacaagttccaaaccgactgaatcctaca
gggcagtcacaacctagccaaccacaagttccaacccgactgaatcctactgggccgtct
caacttagccaaccacttgttccaactagacagaatattacagggcagcctccaccaagt
caacccccgggtcctagacaggattgtgttgtaaaggatcttagccagctactctgtaaa
gacagagatgtggtccacccccttctccctccaaccccctctgatgcaacagttttccga
ccacctcttcctgatacaacagttgtcagaccacctcttcttgatgcaacagttctcaga
ccacctcttcctgtcacttcaaagaccgctaaaggagattcagaagctccagtgaaacgc
actgttggtagttccagccaggactgtgtgaatagacaccctacacgtgaacttgacccg
tcagacgagccgaaacaaaccaagcacagagaaggcggaggtggaaatccgaggctgtcc
gactcaaatgagcagcgaaaatataactccaagtcaagcagatgccctcgtctctcagat
gttgaggtacgcaggagatcagagcgggccaaaaatccaacctctgacattttgcattgc
actgcttcctctgaccgcacttccgaaggattgtctaaagattgtgcagcctatcaatca
aaaggttctagtcggcattatcaggagctcaggcgtgataagggtgatggtaataggcat
agtagaggtactaaagacatttcctctaacagaaagcatgcctgtgaatcttttaatcgc
aagggagggacaagtcctccaagggaccgtcaaaggaaagaggagagaagaagagaggat
gaggtcagaaaagaaaagaatacatcaaaaaaatcaggagaaagaaaaagcacttgtaca
gagagaagaagaacaaaggaaagtggccgatgcagtaaggacaagacaatggacgacagt
aaagtcggggggcaaaggactggtgagaagtctgaatttcttccatctgaggctaaagtg
gctgcgaaaagctctgtagaggaaactggtccaaacagaaagttaagtttcatggaaact
ctgaatcttaccctgtcaccagttaaaaaaccaagacagcgtgctgaaaccaaggaacgg
gagggcacaccacctgaggaagtttctgaagaccagtcagcggaagacagtggacagcct
gatctcgacaagttactcatcttagacgaaatcaacagcagtgtggtagagaccgacgag
gtatttgaggacccagtggtacagcccacttcagaaatcccaatgccttcggaacctgga
agtattgaccttagacatacagacaaagaaccttgtcaggatgctaacaaaggtctgact
gaggccacagtggccaaaaagcaacctaagtgccagttagaagtggaagacactattgtc
caaggtgtctctgaaggtaagcctgagctgccggaggccacagtggatcagaggactgaa
cccaccacaccagaacctctcagggaggtttgtgtttcagctccagactgtgccattgtt
ttgagaactccactgaaaagcagacctgaagaatgtgcctctgcgaataaatcgagtgag
tctgaggattttactgctgctgctgtcactgctcttactgtggctgggaattgtggaaac
aattcaaatactgacactggcctatcgtctaacggatttacccctgaccattcaaaggaa
aatgtagttcttattactgacaatcgggtgtgtaagccaaacggtaaaactcccagtgct
ttggtctgtgaaagtcaagctgttgaaactgtgacacatgttccacccgctgctgtctgt
gtgggacaccctgctgttgaaggtgtttcaggaaaagaaccatcggaatctctgcaattg
ccactgcctgcctctgttatttcaacctctagtctagacgtgacagcagaggtgcaagat
atttccaagcatggtgtttccagtacgattagcatggaggtaattccagagatctgcatt
ccatctgagatcgttgaagatgccacagagatacctctggagtgtgagaaagagcgaact
gttgtggaacaaggttcaccgttgagcggttttgaagtgtctaaggtgagcagcacaacg
ggagaggttgcaccatcagcacagcacaacagtggcttgtcacaaacgccaaaaaagtcc
cttgattctgagccaagtcacacagagaatgaggacatgaatgttgagccctctagctcc
attccattggcccatgatgagaactcgatgatgcttacactgggcagccttaaaggtatt
ccagatgccatcagcccactcacaagcccagtccgtccaatgaggaaaagccatcagccg
ccatgtcacagcaaacccgcttacgtcaagagtcttcgcaaagagtttaccagtgctgct
ggggatcccaattcaaagaagttagatgtgaatatggagaacaagaatcctggccgctcc
attgcaagtgctacacaacaagctgtggatcgggcttctgtccgttcttccagccctgag
gatgaattggaagagggtgaaatccttagtgaaggggaagaaacgccaagttctccagcc
aaaacggttaggcccacaagcccggttaaaagtcaacaaattcccaagtcatcccctagg
ctttccaagaagtctcttgaagagaaagggaattctaaactcttaagtaaaaccttgatt
tcaccagttagaagccccatgtcaaaatctcgctataaaacggttcaacctccgttaccc
aaagctgccttgtgtaccgtggaggaggttatggccatgtttgtaaagatccgctatgcg
tgcaggaaaaagtacatgaagcttcgttcaaccttctctaaggaacgcttctgcggtgtt
atggacatgtcccttgactcttttacagactttgttgatagtgtcagctttactaaacta
tgcagccaagaagatgacctcaaagtgaaattgaagaacaacataatgtctgttttgagt
aagttatcaaataatggcattgtcaaccgcatctttgaccaggaaccacttaatatgaag
tcgaaactgtgggaatttgtgaatgtgcagttagacttcttattcaaggaaattcagact
gctctgagaagtgtttgcaaatcctcaaatggaaaccagtctgcaggagctgaaaaaagg
gacttgagtctctccaagcagccagtgaagtcccccaagcagccagtgaagtcccccaag
cagccagtgaagtcccccaagcagccagtgaagtcccccaagcagccagtgaagtccccc
aagcagccagtgatgtcatcggtgtccacagcctctaaacttaaaagaccgcagggagcg
gtgcaaaaaacgaattgtgtgtccagaacatctgcaagtaaaagaccgcaagaggaatta
acagactgtgttgaacccaacataaaaagaaacagggctcagactctccccccttgcaaa
accggtcttggaagaggaaaaaatattaaaatgtcatttgaagaagacaaggaatcagag
cctcaaacctcagatcatcctcttatgcaacctcctttgcaacacgggttagagatctta
tcatcaaacagcccttcgtctgctgagaaaacggctgcctatgttcgccggctgtctcaa
aatggctcactccatgacaagtctgacttcgaaatcctcacagaacagcaagcctccaac
ctaacattcaacctggtgacagactcccagatgggagagatcttcaagtgtctgttacaa
gggtctgatctgctagaaactaatgtctcagctggggacaatcacggctggcctcttggt
actcctcggaaaggagagcgcttccgaggcgttaccaccccaagcaaagtttgtaccaca
accaaagttggttctccctctaaagtcattgccacatggtcttctatttcaccttgcaag
ttttcctctccaaattcaaaagtccaaattccactaaatccagctttgttggatgagagt
tgcatgttggaggtgccctccagcctaccagaagacaaaatgacattgcagtccagtgtg
ttctcgcagagatcttattccattttggcagaagatctggctgtctccctcacaattcct
tcacctctcaagtctgacaatcacctcagcttcttgcacccagccagcgtggagcccatg
gctgctccagatagtgtcatcagtgcacatttcagtgaggatgctcttatggatggggaa
gatgctacagagcaggacattcaccttgccctggacacagacaactccagcggtgcgtca
agcggtggtggcaggactagggaggctcctgttaaccccctgtttcacttcaagcctcac
ttgcccatgcaggcagtagtgatggagaagtcaaatgatcatttcattgtgaggatacgg
catgcaaacaccagcccagacatcaactccaacaactcaggtgtcaacttcaccaaccta
ggcatcaactgcaccaacccaggcatcaacttctccaacctaggcaacaactccaccagc
ctagtggtcaaccccacatgccgaggaattaaatcaacaagccaaggagtcaactcttca
agcccaggaagtgtaaactctacctacccaggaaataactctaccaacaaagacacaaac
tcaagctacccatgtgtcaactccacaagcccacaagtcaactgcaccaacccagttatc
taccccatacgtgcagacatcaatccaagggctgtctcaggccctcaaacaccaccagga
gaagaacaacatggcaaagaccaaggaaaaactccttcgaaaacccatttttcagaggcc
agtcctcctttctacctttccacaggcaccgaaacagcatctgcgctgtcttcaccatgc
ctcaccatcatagaagacacaccggagagggaccacagcaagggtaagacggggaaaaag
cggacaaggcaccacgtcgaaatgaaagcaaagcggcctaaaaaggacgtgatccctgag
aagatcaagcataaaaataagtcctcaaaaagggccaaaggaaaggagactagaagctcc
aagagcgagagaagtaaagtcactactccaccccaatctaccccatcacccaacagcctg
tctgccaagaatatcatcataagaaagggggcagtggtggtgacttggacaagggatgaa
gaccgagatattctcctcgcgctgaagatgaaaggtgcctctccagatactttctcttcc
ctatcggagaagatgaacaagacacccgctcagatcgcagagagattttcccagctgatg
aagctttttaagaagaagaagatgatgtcgcaaggtcaaggctcaaatttcccatttgat
gaatga
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