Oncorhynchus gorbuscha (pink salmon): 123995019
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Entry
123995019 CDS
T07892
Name
(RefSeq) probable ribonuclease ZC3H12D isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
123995019
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
123995019
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
123995019
NCBI-ProteinID:
XP_046154192
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All DBs
Position
LG14:complement(49071686..49089800)
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AA seq
613 aa
AA seq
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MDQQHGKVERFLKLGYSHSDIVRVLESLRHDAQTNDILEELIKTCQTPTTTTPSIPASRS
AYSSPQLIPRGCSSPQPSQPLRPSSATDRDPTGGFRPVVIDGSNVAMSHGNKQVFSCRGL
LLAVRWFLERGLRDITVFVPLWRKEQPSPEAPMTADQHILHELEKRAILVYTPSRCVNGK
RVVCYDDRYIVKLAYESDGIVVSNDNYRDLQIERPEWKTFIEERLLMYSFANDKFMPPDD
PLGRNGPTIDNFLMKKQWTPENKQQHCPYGKKCTYGVKCKFYHPERSNQSQLSVADELRA
KSKPTAQTDRERSFLPSGPSPALIQEVSQEAHPYTSPYELDLTTTHLYRYLSTPPPLIKE
EHSHSHRASPSDQFTSQRKTGSPTLHHRSSLRLCPSPDTDEAFSSLEASLSRLYVQDQTN
NTKGPVVSYTYSSGVANCSQHSGDFYPSSTSSSHSHASNQQRLSLGGPSSAWDAPQKLPQ
CGCDDSQSFECSPCMYRHQHLQSKLGGCSYAVHSNHIHFTEQQYFQSPPPQRQSHSLPEH
SPGQGLSGERVGMTRSNGGKAPESEQRRSVKNQLSTLFPHSMVDYVMSVYPHTLNMSELV
PLIQRFRISHIPF
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggaccagcagcatggaaaagtggagcgcttcctcaagctgggctactcccacagtgac
attgtgcgcgtgttggagagcctgcgccatgacgcccagacaaacgacatactggaggag
ctgatcaagacctgccagacccccactaccaccaccccatccataccagccagccgctca
gcctactccagcccacagctgatcccccgaggctgcagctctccccagcccagccagccc
ctgcggcccagctcagctacagacagggatcccactgggggattcagaccagtggtcatt
gatgggagcaatgtggccatgagccatggcaacaagcaagtgttttcatgccgggggctg
ctgctggcagtcaggtggtttctggagaggggtcttcgtgacatcactgtgttcgtgccc
ctgtggaggaaggagcagcccagtcccgaggcccccatgacagcagatcagcacatcctc
catgagctggagaagagggcgatcctggtgtacaccccgtcacgctgcgtcaacgggaag
agagtggtatgttacgacgaccgctacatcgtcaagctggcctacgagtccgacggcatc
gttgtgtccaatgacaactacagagacctgcagatagagaggccagagtggaagacgttc
atagaggaaaggctgttgatgtacagcttcgccaatgacaagttcatgcctccagatgat
cctctgggaaggaatggcccaacgattgacaactttctgatgaaaaagcagtggacccca
gaaaacaagcagcagcattgcccgtatggaaagaagtgtacttacggagtgaagtgcaag
ttctaccacccagagcgctccaaccaatcacagctgtctgtggcagatgagctgagagcc
aagagcaaacctactgctcaaacagacagggagcggtcatttctcccctcaggccccagc
cctgctctgatccaggaagtcagccaggaggcccacccttacacatccccttatgagctg
gatctaactactacgcatctatacagatatctatccacaccgcctccccttataaaagaa
gagcattcccattcccacagggcttcgcctagcgatcagttcaccagccagagaaaaaca
ggcagcccaactctacaccacaggtccagcctccgcctctgccccagcccagacactgac
gaggccttcagctccctggaagcctccctgtccagactctatgtccaggaccagaccaac
aacaccaaggggccagtggtgtcctacacctacagcagtggggtggccaactgcagccag
cacagtggggacttctacccttccagcacttccagcagccacagccacgccagcaaccaa
cagaggctcagcctgggtggaccctcctcagcctgggatgccccgcaaaaactgccacag
tgtggctgtgatgactcacaaagctttgagtgcagcccgtgcatgtacagacaccaacat
ctccagtcaaagctaggagggtgctcctatgctgtgcacagtaaccatatccatttcaca
gagcagcagtacttccagagtcctcccccacaaaggcagagtcacagcctcccagaacac
agcccgggacagggcctctctggtgagagagtggggatgaccaggtccaatggaggtaaa
gctccagagagtgagcagaggaggagtgtgaagaaccagctcagcaccctcttcccccac
agcatggtagactatgtgatgagtgtgtacccacacaccctcaatatgtcagagctggtg
cctctgattcagaggttccgaatcagccacattcctttctaa
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