Oncorhynchus gorbuscha (pink salmon): 123995026
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Entry
123995026 CDS
T07892
Name
(RefSeq) nucleoporin Nup43-like isoform X1
KO
K14305
nuclear pore complex protein Nup43
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123995026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
123995026
03036 Chromosome and associated proteins [BR:
ogo03036
]
123995026
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123995026
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
123995026
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WDR55
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
DSE1_N
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
CFAP251_N
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_DCAF4
EIF3I
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_NOL10_N
DNAI3_WD
Beta-prop_VPS8
KNTC1_N
LIN13_N
Motif
Other DBs
NCBI-GeneID:
123995026
NCBI-ProteinID:
XP_046154207
LinkDB
All DBs
Position
LG14:complement(49140412..49146160)
Genome browser
AA seq
372 aa
AA seq
DB search
MEGINAKYVSKKISKTRWRPVSSSSLQQPDIFATGSWDNEDNSISIWSIGENGVSSMDDE
FEGDPQLLCEYKHNGDVLDLQFLDQDRIVTASSTGAVTIFRHHHNSQSLSVSQLWERAHH
YPCDNAPCTGVVCNSPEIVTVGEDGRIMLFRADQEGVLRTIEKADSSAIHAVTFLRTTEI
LTVNSIGQLKLWDFRQPGNEPSQILSLTGDRVPLHCVDRHPNQQHIVATGGQDGMLCIWD
VRQGNMPISLMEAHTSEMWEVHFHPSNPGHLFSCSEDGSLLHWETSLNSDTPSFLQGGWN
TSIISRSAIAPAGGNQSLINAWLTGDSSKGHLETTHMLPSQMLSVNSLDVLGQCLVCGTD
GEAIYVNRHVPI
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggagggaatcaatgctaagtacgtgtcaaagaaaatcagcaaaacgagatggagaccg
gtctcatcttcgtctttacagcaaccagacatatttgctactgggtcttgggacaacgag
gacaacagcatttcaatttggtccatcggagagaatggggtctccagtatggacgatgaa
tttgagggagaccctcaattattatgtgaatacaaacataatggggatgttctggacctt
caatttctggatcaagacagaatagtaacagcgtcatcaactggagcggtgactatcttt
cggcatcaccacaacagccagtcattgtctgtttctcaactgtgggaaagagcacatcat
tatccctgcgacaacgccccatgtactggagttgtgtgtaacagccctgagattgtcaca
gttggggaagatggaaggatcatgctcttcagagcggaccaggaaggagtgctgcgcacc
atagaaaaggctgacagtagcgcaatccatgctgtgactttcctgaggactacagagatc
cttaccgtcaattctattggccagctcaaactatgggacttcaggcaaccaggcaatgaa
ccatcgcagattctttcattaactggagacagagtcccactgcattgtgtggacaggcac
cccaaccaacaacacattgtggccacaggggggcaggatggcatgctctgtatctgggac
gtgagacaaggcaacatgcccatttcacttatggaggcacacacttctgaaatgtgggag
gtccattttcatccatcaaacccaggccacctgttctcatgctcagaggatggatcactg
ttgcattgggagacttctttaaattcagacacaccatccttcttacaaggtggatggaac
acaagcataatttctcgcagtgcaatagccccagcaggtgggaaccagtccctcatcaat
gcctggctcactggggactctagtaagggacaccttgagaccactcacatgctgcccagc
caaatgctgtctgtgaacagtctggatgtactgggacaatgcttggtgtgtggaacggac
ggagaggctatttatgtcaacagacatgtcccaatttaa
DBGET
integrated database retrieval system
