Oncorhynchus gorbuscha (pink salmon): 123995047
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Entry
123995047 CDS
T07892
Symbol
med23
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogo03021
]
123995047 (med23)
Transcription machinery [BR:
ogo03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
123995047 (med23)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
123995047
NCBI-ProteinID:
XP_046154270
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Position
LG14:complement(50195793..50225157)
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AA seq
1386 aa
AA seq
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MAISMETQLQSIFEDVVKTEVIEEAFAGMFMDTPEDERTKLISCLGAFRQYWSTLPPDSH
DQCVQWIVRFIHGQHSPKRISFLYDCLAMAVETSLLPPRMVCQALISSDNLEWERTQLWA
LTFRLIRKIIGGVDYKGVRDLLKALLDKIQTIPNTVSSAVVQQLLAAREVVEYILDRNAC
LLPAYFAITEIRKLYPEGMLSHWLLGSLMSDFVDSFRPTARINSICGRCSLLPVVNNSGA
ICNSWKLDPTTLRFPLRGMLPFDKDLFEPQTGLLRYVLEQPYSRDMVCNMLGLNKQTLNI
AQHKQRCPVLEDQLVDLVVYAMERSETEEQFDDGGTSQLLWQHLSSQLIFFVLFQFASFP
HMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNALADFLPVMKLFDLLYPEKECIP
VPDISKPQSTHAFAMTCIWIHLNRKAQNDNSKLQIPIPHSLKLHHEFLQQSLRNKSLGMT
DYKIALLCNAYSTNSECFTLPMGVLVETIYGNGSMRITLPGTNCTASGSVTPLPMNLLDS
LTVHAKMSLIHSIATRVIKLAHAKSSIALAPALVETYSRLLVYMEIESLGIKGFISQLLP
NVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQLLSHLHSLAAVPQTNQNQLHLCVESTAL
RLITALGSSEVQPQFTRFLSDPKTVLSAESEELNRALILTLARATHVTDFFTGSDSIQGT
WCKDILQTIMNFTPHNWASHTLSCFPAPLQAFFKQNNVPQESRFNLKKNVEEEYRKWKSM
TNENDIITHFSMQGSPPLFLCLLWKMLLETDKINQIGFRYTTKVLERIGARALVAHVRTF
ADFLVYEFSTSAGGQQLNKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFII
QLLLLKPNDFRNRVSDFVKENAPEHWLQSDWHTKHMTYHKKYPEKLYFEGLAEQVNPPMQ
QQSHYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLY
NTLHYYERHLRDRTNLKRKLVHAIMSSLKDNRAPGWCLSETYIKCGMNPREDNVWIPDDT
YYCKLIGRLVDTMAGKSPGPFPNCDWRFNEFPNPAAHALHVTCVELMALAVPGKDVGNAL
LSVVLKSQPLVPRENITAWMNAIGLVITALPEPYWVVLQDRIVSVLGSPCFTTETEWVGY
PFALLDFTACHQSYSEMYCSYVLALAHAVWHHSSIGQLSLIPKFLSEVLKPIVKTEFQLL
YVYHLVGPFLQRFQQERTRCMLEIGVAFYEMLQAVDQHSQHLSYMDPICDFLYHIKYMFT
GDSVKDQVEKIILTLRPAMKLRLRFITHTSKMEPAAASVPQPSSSVSSPAPQSNPGPSNL
PLSGAQ
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atggcgatttcaatggaaacccagctccagagtatattcgaggatgtagtgaaaacagaa
gttattgaggaagcctttgcaggcatgtttatggacacacctgaggatgagagaacaaaa
cttatcagttgtctaggtgcctttcgtcagtattggagcactcttcctccggattcccat
gaccagtgtgtgcagtggattgtccgattcattcatggccagcacagccccaaacggatc
tcttttctctacgactgcctcgccatggcagtggaaaccagtctgttacctcccaggatg
gtgtgtcaggctctcataagctcagataacctggagtgggagcggacacagttatgggcc
ttgacttttcgactcatacgaaagatcatcggtggtgtggattacaagggagttagagat
ctactgaaggctctgctggataagattcagaccatccccaacactgttagctcagctgtg
gtccagcagctgctagctgcacgagaggtggtggagtacatcctcgacaggaacgcgtgc
ctcctgcctgcctactttgccattacagagatcagaaaactctatcccgaggggatgttg
tcacactggcttctgggcagtctcatgtcagattttgttgacagttttcgacccactgca
agaattaactccatctgtgggagatgcagcctccttccagtggtcaacaactctggagct
atctgcaattcctggaagctggaccccaccacattacgattccctctcaggggcatgctg
cccttcgacaaggacctgtttgaaccacagacagggctgctgcgatatgtgctggagcag
ccctactctcgagacatggtctgcaacatgttagggctcaacaagcagaccttgaacatt
gctcagcacaagcagcgctgcccggtgctcgaggaccagctggtggacctggtggtgtac
gccatggagcgctctgagaccgaggagcaatttgacgacggcggcaccagccagctcctg
tggcagcacctctccagccagctcattttctttgtgctcttccagttcgccagcttccca
cacatggtgctctcgcttcaccagaagctggccggtcgaggtctgatcaaaggccgagac
cacctcatgtgggtcctcctccagttcatatctggcagcattcagaagaacgccctggct
gactttctccctgtcatgaagctgttcgatcttctctacccagagaaagagtgcatcccg
gtgccagacatcagcaagccccagtcgacccacgccttcgccatgacttgcatctggatc
cacttgaaccgcaaggctcagaacgacaactccaagctgcagattcctatcccccactcc
ctcaagctgcaccatgagtttctccagcagagcctgaggaacaagtccctggggatgaca
gactataagatcgccttgctgtgtaatgcctactccactaactcggagtgcttcactctg
cccatgggcgtgcttgtggagactatctatggcaacggcagcatgcgcatcaccctgcct
ggcaccaactgtaccgcatcaggctccgtcacaccactacccatgaacctcctagactcc
ctcaccgtccacgccaagatgagcctgatccatagcatcgccactcgggtgatcaagttg
gcccacgccaagtccagcattgccctggccccagccctggtggagacctacagcagactg
ctggtctacatggagatagaatctctgggcatcaaaggattcatcagccagctcctgccc
aacgtgttcaagtcccacgcctggggcatccttcacactctgctggagatgttcagctac
cgtatgcaccacatccagccccactaccgcgtccagctgctcagccacctgcactcgcta
gccgccgtgccccagaccaaccagaaccagctacacctctgtgttgagagcacagcgtta
aggttgatcacagcgttggggagttctgaggttcagcctcagttcacccgcttcctcagt
gaccccaaaacggtgctgtcagctgaatctgaggagctcaaccgtgccctcattctgact
ctggccagagccacccacgtcacagatttcttcacaggctccgactccatccagggtacg
tggtgtaaggacatcctgcagaccatcatgaactttactcctcacaactgggcctctcac
accctgagctgtttccccgctcctcttcaggcgttcttcaagcagaacaacgttccccag
gagagccgcttcaacctgaagaagaacgtggaggaggaatacaggaagtggaagagcatg
accaacgagaacgacatcatcacccacttctccatgcagggatcgccgcccctcttcctg
tgtctgctgtggaagatgctgctggagactgacaaaatcaaccagatcggcttcaggtac
accacaaaggttctggagaggatcggggcacgggcactggtggcccatgtcaggacgttt
gcagacttcctggtctatgagttctccacgtcggccggtggccagcagctcaacaagtgt
atcgagatcctcaacgacatggtgtggaagtacaacattgtcacgctggacagactcatc
ctgtgcctggccatgaggagtcatgagggtaacgaggcccaggtctgctacttcattatt
cagctcctcctcctcaagcccaacgacttccgcaatcgcgtctctgacttcgtgaaggag
aacgcccccgagcactggctgcagagcgactggcacaccaagcacatgacctaccacaag
aaatacccggagaagctgtactttgagggattggccgagcaggtgaacccgcccatgcag
cagcagtcccactacctgcccatctactttggtaacgtctgcctgcgcttcctgcccgtc
tttgacatcgtcatccaccgcttcctggagctgctgcctgtctccaagtcactggagacc
ttactggaccacctgggaggactctacaagttccacgaccgcccggtgacctacctgtac
aacacgctccactattacgagcgtcacctgcgcgaccgcaccaacctgaagaggaagctg
gtgcacgccatcatgagctctctgaaggacaaccgggcgccaggctggtgcctgagtgag
acctacatcaagtgtggcatgaacccccgcgaagacaacgtctggatccccgatgacacc
tactactgcaagctcatcggacgcctcgtcgacacgatggctggcaagtcccccgggccg
ttcccaaactgtgactggaggttcaacgagttccccaacccggccgcccacgctctccac
gtcacctgcgtggagctgatggccctggcagtgcccggcaaggacgtgggcaacgccctg
ctcagcgtcgtcctcaagagccaaccgctggtgcctcgggagaacatcaccgcctggatg
aacgccatcggcctggtgatcaccgccttgcctgagccttactgggtggtcttgcaggac
cgtatcgtgagtgtgctgggcagtccgtgcttcaccacagagactgagtgggtgggttac
cccttcgcgctgctggacttcaccgcctgccaccagtcctactctgagatgtactgcagc
tacgtgttggccctggcccacgccgtgtggcaccactccagcatcggacagctctccctc
atccccaagttcctgtctgaggtgctgaagcccatagtaaagacagagttccagctcctc
tatgtgtaccacctagtggggcccttcctccagcgcttccaacaggagaggacccgctgc
atgctggagattggagtggcgttctatgagatgctgcaggctgtggaccagcacagtcaa
cacctgtcctacatggatcctatctgtgacttcctctaccacatcaagtacatgttcacc
ggggacagcgtcaaagaccaggtggagaaaatcatcctgaccctgcgtccggccatgaag
ctccgtctgcgtttcatcacccacaccagcaagatggagcctgcagccgccagcgttccc
cagccctcctcctctgtgtcctcacccgccccacagagcaaccctggcccctccaacctc
cccctgtctggggcccagtaa
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