Oncorhynchus gorbuscha (pink salmon): 123995200
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Entry
123995200 CDS
T07892
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03410
Base excision repair
ogo04210
Apoptosis
ogo04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
123995200 (parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
123995200 (parp1)
04217 Necroptosis
123995200 (parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ogo03032
]
123995200 (parp1)
03036 Chromosome and associated proteins [BR:
ogo03036
]
123995200 (parp1)
03400 DNA repair and recombination proteins [BR:
ogo03400
]
123995200 (parp1)
Enzymes [BR:
ogo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
123995200 (parp1)
DNA replication proteins [BR:
ogo03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
123995200 (parp1)
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
123995200 (parp1)
DNA repair and recombination proteins [BR:
ogo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
123995200 (parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
123995200
NCBI-ProteinID:
XP_046154581
LinkDB
All DBs
Position
LG14:57864575..57876268
Genome browser
AA seq
1013 aa
AA seq
DB search
MADAQEDKLYKAEYAKSGRASCKKCKENIAKDSLRMAIMVQSPMFDGKVPHWHHFSCFWL
RASAQSPADIAGFSDLRWEDQEKVKKAIETGGAAGGKGDVKGGAKGEKTLNDFAVEYAKS
NRSTCKGCEQKIEKDQIRVSKKTIDPEKPQLGLIDRWYHTACFVGRREELVFKPEYSAAQ
LKGFNTLRVEDKEELKRRLPVVKSKGKRETDEVDGEGASKKKKDEEEKKKVDLQMKEQSQ
LIWGIKDKLRQFCSTNDMKELLIANGQEVPSGESNVVDSLGDCMAFGALKPCEECQGQLV
FKSDAYYCTGDLSAWTKCVFKTQLPNRKGWVIPKEFHELPFLKKFKFKRQDRVFPKVAPP
PASSASAPVPSASSAPSIPLPEGAPADKPLTGMKLLTVGKLRQNKDELKAAVEELGGKIT
GTANKATLCLSTKKEVEKMSKKMEEAEEAGVRVVSEDFLTDIKSSGKALQELVSLHAISP
WGAEVKLETQAQSAASRSGAMAGKSTKRVKEEEGVSKASKKMKLTVKGGAAVDPDSCLEN
SAHVLDQNGKIFSATLGLVDIVRGTNSYYKLQLLEDDVHKRYWVFRSWGRVGTTIGGNKL
DKFHDKNSAMDNFLGVYEEKTGNAWGSSHFTKYPNRFYPLEIDYGQDEEAVKRLTASAGT
NSLLAKPVQELIRTIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYALLSEVQQAVS
DSSSESHILDLSNRFYTLIPHDFGMKKPPLLSNLDYIQAKVQMLDNLLDIEVAYSLLKGG
AEDNKKDPIDINYEKLKTKIEVVDKTTKEAEIILQYVKNTHAATHNTYTLEVEEIFKIVR
EGEYQKYRPFQDLPNRQLLWHGSRATNYAGILSQGLRIAPPEAPVTGYMFGKGVYFADMV
SKSANYCHTSQSDPTGLLLLGEVALGNMHELKKASHITKLPKGKHSVKGLGRNAPDPSAT
VTLDGVQVPLGKGTNTNIDDTSLLYNEYIVYDVAQVNLKYLLKIKFNYQMSMW
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgcacaagaggacaagctttacaaagctgaatatgccaaaagtggacgtgct
tcgtgcaagaaatgcaaggaaaacatagcaaaggattcgctgcggatggctatcatggtg
cagtcgcccatgtttgacggtaaggtgccccactggcaccacttctcctgcttctggctg
cgggcgtctgcccagtctcctgcagacatcgctggattctctgacctgcgatgggaggac
caggagaaggtcaagaaggccattgagactgggggagctgcaggaggaaaaggtgatgtg
aagggtggggccaaaggggagaagactctgaatgactttgcagtggagtatgccaagtcc
aatcgcagcacatgtaaagggtgtgagcagaaaattgaaaaggaccagatccgtgtatct
aagaagacgattgacccagagaagccccagctggggttgatagaccgctggtaccatacc
gcctgctttgtgggccgcagggaggagctggtcttcaaaccagagtacagcgctgctcag
ctcaaaggctttaacacactcagggtggaggacaaggaggagctgaagagaaggttgccc
gtcgtcaaatctaaaggaaagagagagactgatgaggtagatggagaaggggcatcgaag
aagaagaaggatgaggaggagaagaagaaagtggacttgcagatgaaggagcagagccag
ctgatctggggcatcaaggacaagctcaggcagttctgttccaccaacgacatgaaggag
ctgctcatcgccaacggacaggaagtgccctctggagagtccaatgtggtggacagccta
ggagactgcatggcctttggcgcactgaagccctgcgaggagtgccagggccagctggtg
ttcaagagcgacgcgtactactgcactggagacctctccgcctggaccaagtgtgtgttc
aagacccagctgcccaaccgcaagggctgggtcatccccaaggagttccatgagcttccc
ttcctcaagaagttcaagtttaagagacaggaccgggtgttccccaaggtggcccctccc
ccagcctcttctgcatccgctcccgtccccagtgcctctagtgctcccagtatacccctc
ccagagggagcccctgcagataagcctctgacagggatgaagttgctgactgtgggcaag
ctgagacagaacaaggatgagctgaaggctgctgtggaggagctgggcgggaagatcacc
ggcacagccaataaggctactctctgccttagcaccaagaaggaggtagagaagatgagt
aagaagatggaggaggcagaggaggcgggcgtgcgcgtggtctcagaggacttccttact
gacatcaagtcctcgggcaaggccctgcaggagctggtctccctgcacgccatctccccc
tggggggccgaggtcaaactagagacccaggctcagtcagcagcctccaggtctggagcc
atggctggcaagagcaccaagagggtgaaggaggaggaaggtgttagcaaggctagtaag
aagatgaagctgactgtgaaaggaggggcagcagtggacccagactcatgtctagagaac
agtgctcatgtcctggatcagaatggcaagatcttcagcgctacgctaggtctggtggac
atcgtcaggggaaccaactcctactacaaactgcagctgctggaggacgatgtgcataaa
cggtactgggtgttccgctcctggggcagagtgggcaccaccatcgggggaaataagctg
gataagttccatgataagaactctgccatggacaacttcctgggtgtgtacgaagagaag
acaggaaacgcctggggctcttcccacttcaccaagtatcccaacaggttctaccctctg
gagatcgactacggtcaggatgaggaggcagtgaagaggctgacagccagtgctggcaca
aactctctgctggccaagcctgtccaggaactcatcaggaccatctttgatgtggagagc
atgaagaaggccatggtagagtttgagattgacctccagaagatgccgctggggaagctg
agtaagaggcagattcagagtgcctacgccctcctcagtgaggtgcagcaggctgtgtcg
gacagttcctcagagtcccacattctggacctgtccaatcgcttctacaccctcatacct
cacgactttggcatgaagaaaccaccgctgctcagcaaccttgactacattcaggctaag
gtccagatgttggacaacctactggacattgaagtggcctacagtctgctgaaaggaggg
gccgaggataacaagaaggaccctatcgacatcaactatgagaaactcaaaaccaagatt
gaggttgttgacaagaccacaaaggaggcagagatcattctgcagtatgtcaagaacaca
cacgctgctacacacaacacctacacactggaagttgaggagatcttcaagatcgttagg
gagggagagtatcagaagtaccgccccttccaggatctgcccaatcgacagcttctgtgg
cacggttctcgtgccaccaactacgctggtatcctttctcagggtctgcgtatcgcccct
cctgaagcccccgtgacgggctacatgtttggtaaaggtgtgtactttgccgacatggtg
tccaagtcggccaactactgccacacctcccagtccgacccaactggcctacttctactg
ggagaggtcgccctcggaaacatgcatgaactgaagaaggcctcacacatcacaaaacta
cccaagggtaaacacagtgtgaaaggtttgggtcgaaacgccccagatcctagtgccact
gtcactttagatggggtgcaagtgcctctgggaaaaggaaccaacaccaacatcgacgac
acgagtctgctgtacaacgaatacattgtgtatgatgtggcacaggtgaacctgaagtac
ctgctgaagatcaagttcaactaccagatgtccatgtggtga
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integrated database retrieval system
