Oncorhynchus gorbuscha (pink salmon): 123995214
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Entry
123995214 CDS
T07892
Name
(RefSeq) flap endonuclease GEN homolog 1 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ogo03400
]
123995214
DNA repair and recombination proteins [BR:
ogo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
123995214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Motif
Other DBs
NCBI-GeneID:
123995214
NCBI-ProteinID:
XP_046154601
LinkDB
All DBs
Position
LG14:58542413..58550458
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AA seq
968 aa
AA seq
DB search
MGVHDLWSILGPVRESVPLYSLTGKTLAVDLSLWVCEAQHVQAMMGKVTKPHLRNLFFRV
SSLTLMGVKLVFVMEGEAPKLKAETMSKRTDMRFGRFDKSAPKKQTTKATNRGRFNAVLR
ECAEMLDCLGVPWVTAAGEAEAMCAFLDAQGLVDGCITNDGDAFLYGAQTVYRNFNMNTK
DPQVDCYRTSRVETELQLARETLVGLAILLGCDYIPKGIPGVGKEQALKLIQTLKGQTLL
QRFSQWREEGVVAPEWVLKKVPHCHLCRHPGSAKAHERSGCVLCDSKHFCEPQDYDYQCP
CHWHCCEQTRQASSTDASIRKKTLASDKFPFTEIINEFLVDKDKPVHNFKWRKPNMLLMQ
NFAYNKMEWPKHYTSEKVLVLMTYTELMNRKHGRATLSLIKPLRIWKPRVRNAIASFEII
WSKPDHYVFSEDHPEDSQDEVRTVEEEALFRLAYPHVVELYLREKAENKTKKKKPKGKKD
KPSDHCDVSDLLAKMSLHSSTADKNTQQPSAMAVALTITTSNNSVLVLEGPESESPKKHL
DPGKDHPRLEVRLGPQIQEVMSPPSFTSSGKIPEAAASSPSVSVVMDALHLSDIDWESQS
FTSSPPPQAADARTATYPKSLQTTNDSVEERITKLGPSTDLRAAEAVPGPSYAECSLRDR
VLMRNACKSVNMADNDDVTIIHVNSQSAAPPDLIDSNNSGPKPMALIPIKSSNDSKPSEQ
TLVCGKKATLVDKDQSIALLHKPQPAHHISKPISLNATQTGPVTATQTQGAKQHVAGEPK
PPQKYRFVKKAISSSSALPQRSHSEPSDTQPGRDDRHMKSHQETKKSVCARVCSSSEDSD
TENQCRGGGQSRAKVKPKSRHRCQYLTDYSLKPTSKPSTSTKAAWDTVTAQPLRPRAVSA
SMGEQPMRGSSVSTIGKCQDVHPIRVDDDIVFIPSPVSPVIMSDGDDSVICSKSPLPLAE
RVKLKFLK
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgcacgacctgtggtccattctggggccggttcgggagtcggtgccgttgtac
agcctcaccggaaagaccctggccgtggaccttagcctgtgggtctgcgaggcccagcac
gtccaagcaatgatggggaaagtcaccaaacctcacctccggaatctgttttttagagtt
tcctctcttacactgatgggggtaaagctagtttttgtcatggagggagaggcccccaaa
ctcaaagcagagaccatgagcaagaggacagacatgagatttgggaggttcgacaagtca
gcccctaaaaaacaaactacaaaggccaccaacaggggtcgcttcaatgctgtgctgaga
gagtgtgcagagatgctggactgtctgggtgtcccctgggtgacagcggcaggggaggcc
gaggccatgtgtgcctttctggatgcccagggcctggtggacggctgcatcaccaacgat
ggggacgcttttctctacggagcgcagaccgtctacagaaacttcaacatgaacaccaag
gatccacaggtggattgttacaggacttctagggtggagacagagctgcagctagccagg
gagacactcgtgggtctggccatccttctgggctgtgattatattcctaagggtatacca
ggagttgggaaagagcaagctctaaaactcatacagacattgaaaggacaaacactttta
caaagattcagccagtggagggaggagggcgtggttgcgccagagtgggtcctaaagaag
gtccctcactgccatttgtgtcgccatcctgggtcagccaaggctcacgagcgcagtggc
tgtgtgttgtgtgacagcaagcacttctgtgagcctcaagactatgactaccagtgtcct
tgtcactggcactgctgtgagcagacacgacaggcctcttcaacagatgccagcatcagg
aagaaaacactggcaagtgataagttcccttttacagagatcataaatgaatttcttgta
gacaaagacaagcctgtccacaatttcaaatggaggaaaccgaacatgctattaatgcag
aactttgcgtacaataagatggagtggcctaaacactataccagtgagaaggttctggtc
ctgatgacttacactgagctgatgaacagaaaacatggaagagcgacgttgtctctgata
aaacctctacgtatatggaagccaagagtaaggaatgcaatcgccagctttgaaatcatc
tggagtaagccagatcactatgtgttttctgaggaccaccctgaggacagccaggacgag
gtgaggacggtggaggaagaggctctgttccgcctggcctacccacatgtggtggagctg
tacctcagggagaaggctgagaacaagaccaagaagaagaaaccaaagggtaagaaagac
aagccttcggatcactgtgatgtttctgacctcctggccaagatgtctttgcacagttcc
actgctgacaaaaacacccaacaaccctctgccatggcagtagcactgaccattacaaca
agtaacaactcagtgttggtcctggagggtccagagtcagagtctccaaaaaagcatctg
gatcctggtaaagaccatccccgcttagaagtacgtcttggacctcagatacaggaagtg
atgtcacctccgtctttcacttcctctgggaagattccagaagcagcggcctcctctcca
tctgtttccgtggtgatggatgctcttcacctgagtgacatcgactgggagtctcagtca
ttcacgtcctccccgcccccgcaggctgctgacgctcgcactgccacttaccccaagtca
ctccaaaccacaaatgatagtgtcgaagaaaggatcacaaaactgggcccctctactgat
ctcagagcagcagaggccgtaccagggccaagttatgcagagtgttcgctgagggacagg
gtcctaatgagaaacgcatgcaagtctgtgaacatggcggacaatgatgacgtcaccatc
atacacgtaaactcccagtcagcagcaccccctgatttaattgattctaacaacagtggc
cccaagccaatggcactgatacccattaaaagcagcaatgattccaagccatcagaacag
acgctggtgtgtggcaagaaagccacacttgttgataaggaccagagcattgcattgctc
cataagcctcaacctgctcatcacatctcaaaacctatctcattgaacgcaacacaaaca
ggcccagtcacagcaacacaaacacaaggggctaaacaacatgttgccggtgaaccaaag
cctccacagaagtacagattcgtaaagaaggccatctcatcttcttccgctctgccacaa
aggagccactctgaacctagcgacacacagcctggtcgggatgacaggcacatgaagtca
catcaagaaaccaagaagagtgtgtgtgccagagtgtgttcatcgagtgaggacagtgac
acagagaaccagtgtcggggaggagggcagagcagggccaaagtcaaacccaaaagcagg
cacaggtgccaatacctcacagactattcactgaaacccacctccaaacccagcacctct
acaaaggcagcctgggacacagtgacagcccagcccctcaggcctagagctgtgtctgcc
agtatgggtgaacaaccaatgcgaggcagctctgtgtctaccatagggaagtgccaggat
gttcatccaattagagttgatgatgacattgtgttcattccaagccctgtttccccagtg
attatgtctgatggtgatgactcagtgatttgcagcaagagcccactgccattggcagag
agggtgaagctgaagttcctgaaatga
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