Oncorhynchus gorbuscha (pink salmon): 123995226
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Entry
123995226 CDS
T07892
Symbol
rfc3
Name
(RefSeq) LOW QUALITY PROTEIN: replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03030
DNA replication
ogo03410
Base excision repair
ogo03420
Nucleotide excision repair
ogo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123995226 (rfc3)
03410 Base excision repair
123995226 (rfc3)
03420 Nucleotide excision repair
123995226 (rfc3)
03430 Mismatch repair
123995226 (rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ogo03032
]
123995226 (rfc3)
03036 Chromosome and associated proteins [BR:
ogo03036
]
123995226 (rfc3)
03400 DNA repair and recombination proteins [BR:
ogo03400
]
123995226 (rfc3)
DNA replication proteins [BR:
ogo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
123995226 (rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
123995226 (rfc3)
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
123995226 (rfc3)
DNA repair and recombination proteins [BR:
ogo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
123995226 (rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
123995226 (rfc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_22
AAA_16
AAA_11
ABC_tran
DUF2247
Motif
Other DBs
NCBI-GeneID:
123995226
NCBI-ProteinID:
XP_046154618
LinkDB
All DBs
Position
LG02:complement(108500381..108515251)
Genome browser
AA seq
354 aa
AA seq
DB search
MSLWVDKYRPTSLGKLDYHKEQANQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLHIEHQSITAPSKKKIEINTIASNYHLEVNPSDAGNSDRVVIQELIKTMAQSQQ
IQTSTQREFKVVLLTEVDRLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIGPIRSRCL
AVRVPLPSTEEVCNVLSTVCRKEGLLLPXELAKQISEKSGRNLRKALLMCEACRVQQYPF
SADQDIPETDWEVYLRETANAIVSQQSPQRLLEVRGRLYELLTHCIPPEIIMKGLVTELL
GNCVVCCXGTVSVCRAWXQRQQGNKAIYHLEAFTARFMAIYKKFMEDGLDAMMF
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtgggtggacaaatacagacctacttctctggggaaactggactaccacaaa
gaacaagcaaatcagctgaaaaacctggtccagtgtggggacttccctcatctgttggtg
tacggaccgtctggagcagggaagaagactcgtatcatgtgtctgctgagagaactgtac
ggagcaggagtggagaaactacacatagaacaccagtccatcacggctccctctaagaag
aagattgaaatcaacaccatagccagtaactaccacctggaggtcaacccaagtgatgct
ggtaacagtgaccgggtggttatccaggaactgatcaagactatggcccagtctcagcag
atccagaccagcacccagagggagttcaaagttgtcctgttgacagaggtggaccgcctc
actaaggatgcccagcatgcattgcgtcgtaccatggagaagtacatgtccacctgccgc
cttatcctctgctgtaactccacctccaaagtcattggaccaatcaggagcaggtgtctg
gccgtcagggtgcccctgcccagtacagaggaggtgtgtaatgttctgtctacagtgtgt
aggaaggagggtctgcttctccccnctgagttggccaaacagatatcagagaagtctgga
cgcaacctccgcaaagcactgctgatgtgtgaggcctgcagagtgcaacagtacccgttc
tcagcagaccaggacatcccagagaccgactgggaggtttacctgagagagacggccaat
gccatcgtcagtcagcagagtcctcagaggttgttagaggtgagggggagactgtatgag
ttgctgactcactgcattcctcctgagatcatcatgaagggcctggtaacagagttgcta
ggtaactgtgtggtgtgttgttaaggtactgtgtctgtgtgtagggcctggtaacagagg
cagcagggcaataaggccatctaccatctagaggccttcaccgccaggttcatggccatc
tacaagaagttcatggaggacggactggacgccatgatgttctga
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