Oncorhynchus gorbuscha (pink salmon): 123995227
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Entry
123995227 CDS
T07892
Symbol
tulp4a
Name
(RefSeq) tubby-related protein 4a
KO
K24720
tubby-related protein 4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
123995227 (tulp4a)
Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
Other domain-containing proteins
Tubby family proteins
123995227 (tulp4a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Motif
Other DBs
NCBI-GeneID:
123995227
NCBI-ProteinID:
XP_046154615
LinkDB
All DBs
Position
LG14:58572817..58630375
Genome browser
AA seq
1822 aa
AA seq
DB search
MFAAVEHGPVLCSDSNILCLSWKGRVPKSEKEKPVCRRRYYEEGWLATGNGRGVVGVTFT
SSHCRRDRTTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDTDGGIFVWIQYEGRWSVEL
VNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHWSSEINLESQITCGIWTPDDQ
QVLFGTADGQVIVMDCHGRMLAHILLHESDGIVSMSWNYPSFLVEDSSESDTDSDDYTPP
QVQRLKPLLTVSFTSGDISLMNNYDDLSPTLIHTGLKDVVVQWCSQGDLLAVAGMERAVL
LPDSSCLPPTRNAVVKFYNVCGEHIYTLDTPAQRPITTLCWGHRDSRLFLACGPVLYMVR
VEHRVASLQLLCQQGIAGALREEKDVAKLTMPSRLCSYVTTAFTPTIKPPIPDPNNMRDF
VSYPTAGNERLHCTMKRTEDNPEVGGPCYTLYLEYLGGLVPILKGRRISKLRPEFVIMDP
KTDGKADEVYGNSLISSMIDSCNCSDSSDIELSDDWVGKKSPKISRGSKSPKLPRINIDP
RKSPKLSRATQEISRSPRLPIRKPSIGSPSLTRREFPLDDITQHNYLAQVTSNIWGTKFK
IVGLATFLPTNLGAVIYKTSLLHLQPRQMTIYLPEVRKISMDYINLPVFSPNVFSEDEDD
LPVTGASGVTDDNPPCTVNIPIAPIHSPAQAMSPTQSIGLVQSLLANQNVQLDVLSNPTA
ISSVASAGAGGSSDQGQDTILTAQYTVPSRYSSPGQVIFGGLEMSRLLVGPPPSHHHQQQ
QQQQQQSHPQSHQQPLQQHHQQQQIQHQQQQQLQHHHQQLQQQQQRLAQQHHQQQLAQQH
QQQIQQQQMLQHQQMQQQQIQQQQQHIQQQIQHMQQQQQHIQQQHQQQLQHQQQLQQQLQ
QQQHTQQLQQQQQQIQQHMQQQQQHQQHHQMQQQQQIQQHHQMQQQLQISVPSQVSGAAV
HQLQQGALQIPVPHPAGGLVAERRVSVEHEHLLKIKPTRSAPQLAEGDTVVFSAPLELSK
MNPRPPYPGTVAAAAASASAAAANAASGQAGGSNGTPPPVDLCLKKGEFSLYPPGQQAAQ
YPTPLGYERITTFDSRGNVEEVCRPRTRLVCNQNIYTLQVPGSSATLRVTSSSSSTDAKK
IQLPYASATLNRLTVPRYSIPSGDPPPYPDTANQNTTGGRSTGQRLDSSLIHATLRRNSR
EAALKVSQMLDPQRTLPTKAKSQNAALAASYQQRVPKALYTCSQCSSNSSGLSSAASSAP
SGTANGIAGGTIIRQDFPPGNGAPHSTVIVHSNSASPLVSQSSYNLDGSGNGGGGGNRDR
ADYVNSAFTEDEALSQSLRHLALGSADVSGLTVKRPPPYQWDPATTEEVWVPQERTGSLS
SAGLTGPHKPPPLILSPAQHLDISRLPFILSPKSPTSPSAASFQAAAVAAGYQISLQYAP
GTTYSGPQQQPMPGSPRLCSPKEVVAPVPFNQQDATLVLPPGYPANLSNLACCPLPPMYP
GGSSCAGLPIPPIALHTPWGTYNPCPPCPAPRGHCPHAPKLSQMMVDKSVLSPPPPPPPP
PPPPPAELQLQGHGGSPEAMAMEAGEGFQEVLSLNESPVPSSAEKFGKKNRKRADGRAEE
ANAPAIAEGGKSKKEGRALGDFNSLISSPRLGSREKKKPKGQKEQQLKAKKLSKAPTNSE
FQDSSESEPELFISGDELLNQCQSGKKGWKSKRSLRAASELEEIKCRKANEKEDRGLGSQ
GFVYVMANKQPLWNEATQVYQLDFGGRVTQESAKNFQIELEGRQVMQFGRIDGNAYILDF
QYPFSAVQAFAVALANVTQRLK
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccgcagtggagcatggccccgtcctgtgcagcgactccaacatactctgcctg
tcatggaagggccgggtacccaagagcgagaaggagaagccggtgtgccggcggcgctac
tatgaggagggctggcttgccacagggaatgggagaggggttgtcggggtaacgttcaca
tccagccactgcagaagggatcggactaccccacagaggatcaacttcaacctgagagga
cacaatagtgaggtggtgctggtgcgatggaacgagccctttcagaaactggccacttgt
gacacagacggagggatctttgtgtggatccagtacgagggccgctggtctgtggagctg
gtcaacgatcgcggggctcaggtgagtgacttcacctggtctcatgacggtacccaggct
ctcatctcttaccgtgatggctttgtcttggtgggctcggtcagcggccagagacactgg
tcatcagagatcaacctggagagccagatcacctgtggtatctggacccccgatgaccag
caggtattgtttggtactgcggacggccaggtgatcgtgatggactgccacgggcgcatg
ctggcccacatcctgctgcacgagtcagacggcattgtcagcatgtcatggaactacccc
agcttcctggtggaggacagcagcgagagcgacacagactctgacgactacacaccacca
caagtccaacgtttgaagcctctgctgacggtcagcttcacctctggagacatcagcctg
atgaacaactatgatgacctctcccccactcttatccacactggcctaaaagatgtggta
gtccagtggtgttctcagggggatctcctggccgtggctgggatggagagagctgtcttg
ctccccgactcctcctgtctacctcccaccagaaatgccgttgttaagttctacaacgtc
tgcggagaacacatctacacactggacacgcctgcacaacgtcccatcaccacgctgtgc
tggggtcaccgggactctcgtctgttcttggcttgtggcccggtactctacatggtgcgg
gtggagcaccgggtggccagcctgcagctgctgtgccagcagggcattgccggggcgctc
cgggaggagaaggacgtggcaaagctcaccatgccctctcgtctctgttcttatgtcacc
acagccttcacacccaccatcaagccccccattccagatcccaacaatatgcgtgacttt
gtgagttacccgacggcagggaacgagcggctgcactgcaccatgaagcggacggaggac
aaccctgaggtgggcgggccctgctacaccctctacctggagtacctggggggcttggtg
cccatcctcaagggccgacgcatcagcaagctccgtcccgagttcgtgatcatggacccc
aagacggacggcaaagcagatgaggtgtatgggaacagtctgatctcgtcgatgatagac
agctgtaactgttcagactccagtgatatagagctgagtgacgactgggttggcaagaaa
tccccaaagatatccagaggcagcaagtctcccaaacttcccagaatcaatattgacccc
agaaagtcccccaaactgtcccgcgctacccaggagatctcgcggtcgccacggttaccc
atccggaagccgtccattgggtccccaagtctcacccgcagagagttccccttagatgac
atcacacagcataactaccttgctcaggttacatccaacatttggggaacaaagtttaag
attgtgggacttgccaccttcttgccaaccaatcttggtgcagtgatctacaagacaagt
ctgctccacttgcagcccagacagatgaccatctacctgccggaggtgcgtaagatctct
atggactacatcaacctgcctgtgttcagccccaacgtcttcagtgaggatgaggatgac
ctgccagtcaccggggcctcgggcgtgaccgacgacaaccctccctgcactgtcaacatc
cccattgcccccatccacagtcccgcccaggccatgtcccccacccagagcatcggcctg
gtccagtccctcctagccaatcagaacgtccagctggacgtcctatccaatcccacggcc
atctcctctgtggcttctgcaggggcaggggggtcgtctgaccagggccaggacaccatc
ctgaccgcccagtacacggttcccagcaggtactccagtcctggacaggtcatatttgga
gggctggagatgagccggcttctggttgggcctcctccctctcatcaccaccaacaacaa
caacaacaacaacaacaaagccatccacagagccatcaacaaccactgcagcaacatcat
cagcaacaacaaattcagcatcaacaacaacagcagcttcagcatcaccatcaacagcta
caacaacagcaacaacgactagcgcagcaacatcaccaacagcaactggcacagcaacat
caacagcagatccagcagcagcagatgctgcaacaccaacagatgcagcagcagcagatc
cagcagcagcagcaacacattcaacagcagatccaacacatgcagcaacagcagcagcac
atccaacaacagcaccaacaacagctccagcaccaacaacagctccagcagcagttacag
cagcagcaacacacacagcagctgcagcaacagcagcaacagatacagcagcatatgcaa
caacaacaacagcatcagcagcaccatcagatgcagcaacagcagcagatacaacagcac
catcagatgcagcaacagctccagatctctgtcccctctcaggtgtcaggtgcagcggtg
caccagctccaacagggtgcgctccagatccctgtcccccaccctgcaggggggctggtg
gctgagagaagggtcagtgtggaacatgagcacctgctgaagatcaaacccacccgctct
gccccccagctggctgagggggacacggtggtgttcagcgcccctctggagctcagcaag
atgaacccccggcccccctaccctgggacggtggccgcagctgcagcctctgcctctgct
gcagcagccaacgccgcctctggacaggctgggggcagtaacggcaccccgccgccagtg
gacctgtgcctgaagaagggcgagttctccctgtatcctcctggccagcaggcggcacag
tatccaacgccgctaggctacgagcggataactacgttcgacagcaggggtaacgtggaa
gaggtgtgccggcctcgaacgcggcttgtctgcaaccagaacatttacacgctccaggtc
ccaggaagctcagcaaccctccgggttacctcctcttcttcctcaacagacgcaaagaag
atccagctgccctacgcctcggcaaccctcaacaggctcaccgttccccgctattccata
cccagtggagatccgcccccctaccccgacacagccaatcagaacaccacaggggggagg
agcaccggacagaggctggacagcagtctgatccatgccacactcaggcggaatagccga
gaggccgctctcaaagtttcccagatgctggaccctcagaggaccctgcccactaaagcc
aaatcccaaaacgctgcactggcggcttcctaccaacaaagggtgcccaaagccctgtac
acctgcagtcagtgcagtagtaacagcagtgggcttagcagtgcagccagcagtgctccc
agtgggactgcgaatggaatcgcaggaggtacaatcattagacaggattttcctccaggg
aatggagctcctcacagcacggtgatcgtccactccaacagcgcttctcccctagtctct
caatcctcatacaacctggatggctctgggaatggaggaggaggtgggaacagagacagg
gctgactatgtgaactcagccttcacagaggatgaagcactgagtcagtcattgaggcat
ctggcactagggagtgcagatgtgtctggactgacagtcaagaggccaccgccataccag
tgggacccagccaccactgaggaggtgtgggtgccccaggaacgaactggtagtctgagc
tctgctggcctcaccggaccccacaaaccacccccgctcatcctcagcccagcccagcac
ctcgacatctcccggctgcctttcatcctctcccccaagtcccccaccagccccagtgct
gcctctttccaggctgccgctgtagctgcaggttaccagatctcccttcagtatgctcct
ggcacaacctatagtgggccccagcagcagcccatgccaggctctccccgtctctgctcc
cctaaggaggtggtggccccggtccctttcaaccagcaggatgccaccctggtcctccca
cctggctatccagccaacctgtctaacctggcctgctgccccctccctccaatgtacccg
gggggaagctcctgtgccgggctccccatcccccccattgccctacacaccccctggggc
acctacaacccctgccccccatgcccagcccctcggggacactgcccccatgcccccaag
ctctctcagatgatggtggacaagtcagtcctctctccccctcctcccccaccgcctccc
cctccaccgcccccagcagagctacagctgcagggtcatggtggctcaccagaggccatg
gcaatggaggccggagagggcttccaggaggtgctctccctcaacgagagccccgtgccc
agcagtgctgagaagtttggcaagaagaaccgcaagcgggcagatggcagggctgaggag
gccaatgcaccggccatcgccgagggaggcaaatccaagaaggagggcagggccctgggt
gacttcaactctctgatctccagcccgcggctgggcagcagggaaaagaagaagcccaaa
ggccagaaggagcagcagctgaaagctaagaagctgagcaaggctcccacaaacagcgag
ttccaggacagctcagagagtgaacctgagctcttcatcagcggggacgagctgctcaac
cagtgccagagcggcaagaagggctggaagagcaagaggagcctacgggcggccagcgag
ctagaggagatcaagtgccgcaaggccaatgagaaggaggaccgcgggttgggaagccag
ggctttgtttatgtgatggccaacaagcagccactgtggaatgaggccactcaggtctac
cagctggactttgggggacgtgtcacacaggagtcggccaagaacttccaaatcgaactg
gaggggagacaggtgatgcagtttggcaggattgacggcaacgcctacatcctggacttc
cagtacccattctctgctgttcaagccttcgcagtggctctagctaatgttactcaacgc
ctcaaatga
DBGET
integrated database retrieval system