Oncorhynchus gorbuscha (pink salmon): 123995244
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Entry
123995244 CDS
T07892
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
123995244
Membrane trafficking [BR:
ogo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
123995244
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
123995244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
WD40
WD40_Prp19
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_NUP159_NUP214
Lgl_C
KNTC1_N
Beta-prop_VPS8
Beta-prop_Vps41
CFAP43_N
Beta-prop_WDR35_TULP_N
Synaptobrevin
WD40_like
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
123995244
NCBI-ProteinID:
XP_046154662
LinkDB
All DBs
Position
LG14:60033821..60193066
Genome browser
AA seq
1149 aa
AA seq
DB search
MKKFNIRKVLDGLKEQASSSVSSGQSGAPENNLMHETLQSENFQLCKTVRHGFPYQPSSM
AHDPVQKILAIGTQSGALRLFGRPGVECYCQHESGAAVISLQFLINEGALVSALADDSVH
LWNLRQRRPAILHSLKFNRERITFVHLPFQSKWLYIGTEKGNIHIVNVESFTLSGYVIMW
NKAIELSSKAHPGPVVHISDNPMDEGKLIIGYEAGIVVLWDLKSKKADYRYTYDEAIHSV
AWHHEGKQFICSHSDGTLTIWNIKGQGKPFQTITPHGKQPKDGKKPEPCKPILKVEYKTT
RLGDPFMILSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYSNDFQEPY
AVVVLLEKDLVVIDLAQNGYPIFENPYPLTIHESPVTCCEYYADCPVDLIPALYSVGSRQ
KRQGYSKKEWPISGGNWGLGTQSYPEIIITGHADGTVKFWDASAIMLQVLYKLKTAKVFE
KSRNNKEDKQNTEIVDEDPFAIQIMAWCPESRMLCVAGVSANLIIYRFSKQEITTEVVQL
LEVRLQYEVNDMESPPEGGGGGDRDLPTPGAASPSPQTTGPPTHPSTSSNSSDGVRDNVP
CLKVRSTPLKQSSGYQVELVVQLVWVSGEPPQQITSLALSSSYGLIVFGNSNGLAVVDYL
QKTVLLNLGTVELYGSNDPYQRQARSPRKARQPAGGNGLCDINEGSASEDRCKSPTSVLA
SNHQQFYNGGGGRGAKMSRKLSLPTELKPDLVLLSVCPPRGANPLDHRDNSFSRSRSSSV
TSIDKEAREAITSFHFCETFARKGDSAITPCLYVGTSLGTVLAVALNLPPAGEQRLLQPV
IVLPSGTLARLKGSILRMAFLDNTGTFLPPAFETWYEPNAAGADSEERDKARKRRPVSVS
PSTSQELQESQYAVVCSEKQAKVIALPSQNCIFKHSITETSFVLRADVVQMNIGNCVACF
CANGHIMTLSLPGLRPLLDVNYLPLTDMRIARTFCFTNLGQAMYLTSPTEIQRITYSQET
CENLQEMLGELFTPVETPEAPNRGFFKGLFGGGATSLDREELFGETQAGKASRGLAQHIP
GPQGLEGMKGAASGVVADLARARIALDERGQKLGELDERTAAMLASADSFGKHAHDMMLK
CKDKKWYQF
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaacatcaggaaggtgctggacggcctaaaggagcaggcgtcttcctct
gtttcgtctggccagtcgggcgccccggagaacaatttgatgcacgagacccttcagtcc
gagaattttcagctctgcaagactgtccgtcatggcttcccctatcagccgtcgtccatg
gcccatgacccagtccagaagatcctggccattgggacccagagtggggccctcagactg
tttggtcgtccaggtgtggagtgctactgtcaacatgagagtggagcagccgtcatctcg
ctacagtttctcatcaatgagggggcgctggtgagtgctctggcagacgacagcgtgcac
ctctggaacctgaggcagaggaggcccgccatcctccactcgctcaagttcaacagagag
aggatcacattcgtccacctgccattccagagtaaatggctgtacatcggcacagagaaa
ggaaacatccacatcgtcaacgtggagtcgttcacactctcaggctacgtcatcatgtgg
aacaaagccatcgaactatcctccaaggcccacccaggtcctgtggtccacataagtgac
aaccccatggatgagggaaagctcatcattggatatgaggctggaattgtggtcttgtgg
gatctgaaatctaagaaagcagactaccgctacacttacgacgaggcgatccactcggtt
gcctggcaccatgagggcaagcagttcatctgtagtcactcagacggaacgctcaccata
tggaacatcaagggccagggcaagccatttcagacaatcaccccacatggaaagcagccc
aaggatggaaagaagccagagccctgcaaacccatcctcaaagtggagtacaagaccact
agactgggagaccccttcatgatcctgtctggaggtctgtcgtatgacacggtgggtcgg
cggccatgtctgacggtgatgcatgggaagagtacagccgtgctggagatggactatcct
atcgtagacttcctcacgctctgtgagacgccatactctaacgattttcaggaaccttat
gctgtagtggtccttctagaaaaggatttagttgtaatcgaccttgcacaaaatggttac
cccatattcgagaacccctatccactgaccattcatgagtctccggttacctgctgtgag
tactatgctgactgccctgtggacctcattcccgcactttactctgttggctccagacag
aaacgacagggctacagcaaaaaggagtggccaatcagtggtggtaactggggcctcggc
acacagagctaccctgagatcatcatcactgggcatgctgatgggactgtgaagttttgg
gatgcttctgcaataatgctgcaggtactgtacaagctgaagacggccaaggtgtttgag
aagagcaggaataataaggaggacaagcagaacacagagattgtggatgaggacccgttt
gccatccagatcatggcctggtgtcctgagagcaggatgctgtgtgtggccggggtgtct
gccaacctcatcatataccgcttcagcaagcaggagatcaccaccgaggtcgtacagctg
ttggaggtacgtctgcagtacgaggtgaatgacatggagtcccctccagaggggggaggg
gggggggaccgtgacctgcccaccccaggagcagcctcacctagcccccagaccaccgga
cccccgactcacccctccaccagcagcaactcctctgacggggtccgagacaacgtaccc
tgcctcaaggtgcgtagtacccctctgaagcagtcttcagggtatcaggtagagttggtg
gtgcagctggtgtgggtaagtggagagcccccccaacagatcaccagcttggccctcagc
tcctcctacggcctgattgtgtttggcaacagtaatggtctggcagtggtggactacctc
cagaagacagtgctgttgaacctggggacagtggagctgtatgggtctaacgatccctac
cagagacaggctcgctctccacgcaaggcacgccagcccgccggaggtaatggtctgtgt
gacatcaacgagggttctgcctcggaggaccgctgcaaatcccccacttcagtgttggcg
tcaaaccatcagcaattctacaatggaggtgggggtagaggagcaaagatgtcacggaaa
ttaagcttgcctactgagctaaagccagacttggtcctcctgtctgtatgtcctccgcgg
ggcgccaacccattagaccaccgggacaactccttcagccgttcacgctcctcctccgtc
acgtccatcgacaaggaggcgcgcgaggccatcacctccttccacttctgtgagacattc
gcccggaagggggacagcgccatcacaccatgcctatacgtgggaacctccctgggaaca
gtgctggctgtggccctcaacctcccccctgctggggaacaaaggctgctgcagcccgtt
atcgtcttacctagcggtaccttggcacgactgaagggcagtatcctgaggatggccttc
ctggacaacacaggaaccttcctcccccctgccttcgagacctggtatgagccaaacgct
gcgggcgccgacagtgaggagcgagacaaggcgcgtaaacgccgcccggtctctgtgtca
ccctccacctcccaggagctgcaggagagccagtatgcagtggtgtgctctgagaaacag
gctaaggtcatagcactgccctcacagaactgcatcttcaaacacagcatcacagagaca
tcgttcgtcctgagggctgacgtggtccagatgaacatagggaactgtgtggcctgcttc
tgtgctaacggacacatcatgaccctcagtctgccggggctgagaccattgctggatgta
aactacctgccactgacagacatgcggatagcccggactttctgctttaccaacctgggc
caggccatgtacctcacctcccctactgagatacagaggatcacatacagccaggagacc
tgtgagaacctgcaggagatgctgggagaactgttcacaccagtggaaaccccagaggct
cccaaccgaggattcttcaagggcctttttgggggaggagcaacttccctggacagagag
gaactatttggtgagacgcaggcgggtaaggcgtcccgtggccttgcccagcacatccca
ggtcctcagggcctggagggcatgaagggggcagcctcgggcgtggtggccgacctggcg
cgtgcccggatagcactggatgagagagggcagaaactgggcgagctggacgaaaggacg
gctgccatgttggccagcgccgactcctttggcaaacacgcccacgacatgatgctgaag
tgcaaagacaagaagtggtaccagttctga
DBGET
integrated database retrieval system
