Oncorhynchus gorbuscha (pink salmon): 123995421
Help
Entry
123995421 CDS
T07892
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
123995421
Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
123995421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
NIDO
hEGF
EGF_TEN
EGF_2
fn3
EGF_CA
EGF_3
MAGP
Ig_DSCAM-DSCAML_C
Motif
Other DBs
NCBI-GeneID:
123995421
NCBI-ProteinID:
XP_046154974
LinkDB
All DBs
Position
LG02:complement(4560447..4724192)
Genome browser
AA seq
1460 aa
AA seq
DB search
MVKMSGADLVPGALLPCLCTLLCLNLLLLPGTVEPGVPLEDFYPFGQDSGDSQTISQDDG
GSGLVEISVAFPFFGDRHSGLYVNNNGLVSFLREVSQFTPVSFPIAGDRRVVAPFWADVD
NRRAGQVFYRESKDPSVLLRATADVRRHFSEFPEFSATWILISTWHKVTFFGGSDITPVN
TFQVILITNGEVSFTIFQYHDITWTTGKHASSGGDLAGLGGIAAQAGFNAGDGKRYFNIP
GSRTDDVVNVEGTTNVGYPGRWVFRIDNAQVEVGGCNDSASVCPHLRPCLNGGRCIDDCI
TGNPSFTCSCLAGFTGSRCQIDVEECSSSPCQNGGTCSDQVNGFICQCPPGFTGTVCQTD
VEECSSSPCQNGGTCSDQVNGFICQCPPGFTGTVCQTDIDQCFSQPCLNGGDCRDQVNGY
TCTCPAAFTGTHCETELAVVSVNSSSTSRTENRTVSCEGEGCDKHQICEHTGSGSYNCTC
TQGFYGDNCEEECLCQNGGICVEVNGTCDCSSGFTGLYCQFEVTQTPCSNSRPCPDGGPC
LEYGGTYLCTCQTGVADLDHRDFYPPYVQPRSVCDSSPCLNGGQCYERDGGYTCECKHGY
RGKHCEKVRLNTCASGLCRNGGSCKEEAGSYLCVCPYRFTGKHCEVGRPDPCSSSPCLNG
GTCFHYIGKYKCECSGSFSGRHCDISRESAHSTADLDCGPPLQVKHAELQFSSTLPGSMA
LYVCHPGYTPMPRATQSICGGQGAWSQPPVCQEINECLSQPCLNGGTCRDRVATYQCACD
QGFSGNHCQTDVDECVSEPCKHGGTCEDQPGSYYCHCQQGFMGRDCEIDVVSPEQDGCES
SPCLNGGVCRGYRRNHLCVCKEGFFGDRCQSLDNPCVLQPCGNRGLCQSNRRGNYSCTCR
VGHTGKDCERDLLPPSGLHVLRVEEDEVELHWDLPAPSSQSLFSGFLPVTYAPLGLPGRG
SLPRKTDFLDKKQSTYQLQGLVPGLLPSTSLPSLAADCMDQLQVVNVTSSQTTVDLAPPW
STPAPRSTHSGMEPPWSMPAPRSTHSGMGTALVNTSTTEYAFRYGNRPGQHQHHGVRIQV
WEPPWSTPAPRSTHSGMGTALVNTSTTEYAFSSLLPGQMYTVDVLTQSGIRPDESPSTSH
SAGPLQVWTRPLPPQNLSLAHVTSNSALVTWDHHPRNLPDGFVVNVTRGLSTRSRFLPNG
KLETYTLRELSPGQHYHLALTAVRNTGQEQIHSVPQHLVFTTLSMEERWGGRTRGRPSVV
GQGTPVSHTLALSEPQDLGVAGERELSEEMPRYTELIDGRGKITAKFSKLPRKAIRHRTK
PEPPIQLERMEETTNKISLALEIQRKEEEEESKRKPESSQDCRSLPCLNGGTCAKGGDSY
ICDCVAGFKGRQCELFCQRVPHPCTRLYSETKSVPVWVGEVCHYLYKITYKVQQDICYRE
ICGPPLLPKKSPNRRTNRQH
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagatgtctggagctgacctggtacctggagccctgctaccctgcctctgcacc
ctgctctgcctgaacctgctgctcctccctgggaccgtcgagccgggggtacccctggag
gacttctacccctttggccaggactcgggggactcccagaccatctcccaggacgatggc
ggctcggggctggtggagatctctgttgcattccccttcttcggtgacaggcactctgga
ctctacgtaaacaacaacggcctggtctcgttcctcagagaggtgtctcagttcacacct
gtatcgtttcccatcgccggagaccggagggttgtggcgccgttctgggctgacgtggac
aacaggcgtgcggggcaggtcttctaccgggagagtaaagacccgtctgtcctcctgagg
gccacggctgacgtcagacgacacttctctgagttcccagagttcagtgcgacgtggatc
ctcatctcaacgtggcacaaagtcaccttctttggagggagtgacatcacaccggtgaat
acgttccaggtcatactgatcaccaacggagaggtatccttcaccatcttccagtatcat
gacatcacctggaccacaggcaagcacgccagcagtggaggagacctggcagggctagga
ggcatcgctgcacaggcaggttttaacgctggcgatgggaaacgctacttcaacatcccg
gggtctcgtactgatgacgtcgtgaatgtggaaggaaccaccaacgtgggttaccccggg
agatgggtgttccggatcgacaatgcccaggtggaggtgggcggatgcaacgactccgcg
tcggtgtgtccacaccttcgaccctgtctgaacggaggtcgctgtatagacgactgcatc
accggcaacccttccttcacctgctcttgtctggctgggttcacaggatcccggtgccag
atagatgtagaggagtgctcgtcatctccatgtcagaacggaggtacctgctcagaccag
gttaacggcttcatctgccagtgtccacctgggtttacagggacagtctgccaaacagat
gtagaggagtgctcgtcatctccatgtcagaacggaggtacctgctcagaccaggttaac
ggcttcatctgccagtgtccacctgggtttacagggacagtctgccaaacagacatagat
cagtgtttttcccagccttgtctgaatggaggggactgtcgagaccaggtgaatggttat
acctgcacctgtcctgctgccttcaccgggacacactgtgagacagagttggcggtggtc
agtgtgaattcatcatctacttctcgaactgaaaatcgaacagtgtcctgtgagggggag
ggctgtgacaaacaccagatctgtgaacacaccggctctgggagttacaactgcacatgt
acccaaggattctatggtgacaactgtgaagaggagtgtctgtgccagaatggtggcatc
tgtgtggaagtgaatgggacctgtgactgctcctccggcttcactggactctactgtcag
tttgaggtgacccagaccccatgcagcaacagcaggccgtgtcctgacggaggaccctgt
ctggagtatggaggaacctacctgtgtacctgtcaaacaggtgtggcagacctagatcac
agggacttctatcctccctatgtacagcctcgatcggtctgtgattcgtctccgtgtctg
aacggaggtcagtgctatgagagggatggaggctacacctgcgagtgcaagcatggatac
agagggaagcactgtgagaaagtcagactcaatacctgtgcctctggcctgtgtcgtaac
ggaggctcctgtaaagaggaggcagggagctacctgtgtgtctgtccatacaggttcact
ggaaaacactgtgaagtggggaggccagacccgtgctcctccagcccctgtctgaacgga
ggaacatgtttccactacatcgggaagtacaagtgtgaatgttccggatccttcagcggg
agacactgtgacatcagcagggaatcagcacactccacagcagacctggactgtggtccc
cctctgcaggtgaagcatgcagagctccagttctcctctacgttgccaggctccatggcg
ctgtacgtgtgccacccaggatacacccccatgcccagggccacccagagcatctgtggg
gggcagggggcctggagccaacctcctgtctgccaggagatcaacgagtgtttgtcccag
ccttgtctgaatggagggacatgtcgggacagggtggcgacctaccagtgtgcatgtgac
caaggcttcagtggaaaccactgccagacagatgtggatgagtgtgtgtcggagccctgt
aagcacggaggaacctgtgaggatcagcctggatcctactactgtcactgccagcagggt
ttcatgggacgagactgtgaaatagacgttgtgtccccagagcaggacgggtgtgagtcc
agcccctgtctgaacggcggtgtgtgtcgtggctacaggcgaaaccacctgtgtgtctgt
aaagaaggtttcttcggggatcgttgccagtcgttggacaatccctgtgtactgcagccg
tgtgggaacagaggtctctgccagagcaacaggagagggaactacagctgtacttgcaga
gtgggacacacaggcaaggactgtgagagagacctgttgcctccctctggtctgcatgta
ttacgggtggaggaggatgaggtggagctgcactgggacctgccggccccttcctctcag
agcctgttcagtggcttccttcctgtgacctacgcccctctgggtctcccgggccgtggc
agccttcccaggaagaccgacttcctggacaagaagcagtccacctatcagctgcagggc
ctggtgcccggcctgcttccctcaacatctctaccttctctggccgcggactgtatggac
cagctgcaggtcgtcaacgtaacttcctcccagacgacagtggatctcgcaccgccctgg
tcaacaccagcaccacggagtacgcattcaggtatggaaccgccctggtcaatgccagca
ccacggagtacgcattcaggtatgggaaccgccctggtcaacaccagcaccacggagtac
gcattcaggtatgggaaccgccctggtcaacaccagcaccacggagtacgcattcaggta
tgggaaccgccctggtcaacaccagcaccacggagtacgcattcaggtatgggaaccgcc
ctggtcaacaccagcaccacggagtacgcattcagttctctgctccctggtcagatgtac
acggtggacgttctaactcagagtggtatcagaccagacgagtcgccctccaccagtcac
tctgctggacctctgcaagtctggacacggcccctcccccctcagaacctgtctttggca
catgtgacctccaactctgccctggtgacgtgggaccaccatcccaggaacctgccagac
ggcttcgtggtcaatgtgacgcgaggcctgagcacccggagtcgcttcctacccaatggg
aagttagagacgtataccctgagagagctttctccgggacagcactaccaccttgctctc
acggctgttaggaacacgggacaggaacagattcacagcgtaccacagcacctggtcttc
accacattatcgatggaggaacgatggggagggaggacgagggggagaccgtctgtcgtg
ggccagggaacccctgtgagtcatacactagccctgtctgaacctcaggacctgggggtg
gctggagagagagagctctctgaagagatgcccagatacacagagctgattgatggtaga
gggaagataacagctaagttctccaaactgcccagaaaggccatcagacaccgcactaaa
cccgagccccccattcagctcgagaggatggaggagacaactaataaaatcagccttgca
ctagagatccagaggaaggaggaagaggaggagtccaagagaaagcctgagtcgtcccag
gactgccggagtctgccctgcctgaacgggggtacgtgtgcgaagggcggcgactcctac
atctgcgactgcgtagccgggttcaagggcaggcagtgtgagctgttctgccagcgagtg
ccccacccgtgtacccgcctctactctgaaaccaagagcgtgcccgtctgggtgggtgaa
gtctgccattacctgtataaaataacgtataaagtccagcaggatatttgctatcgagag
atctgtggaccaccactgcttcccaagaaaagccccaacagaagaactaacagacaacat
taa
DBGET
integrated database retrieval system
