KEGG   Oncorhynchus gorbuscha (pink salmon): 123995658
Entry
123995658         CDS       T07892                                 
Name
(RefSeq) histone deacetylase 2
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03082  ATP-dependent chromatin remodeling
ogo03083  Polycomb repressive complex
ogo04110  Cell cycle
ogo04330  Notch signaling pathway
ogo04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    123995658
   03083 Polycomb repressive complex
    123995658
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    123995658
   04350 TGF-beta signaling pathway
    123995658
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    123995658
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ogo03036]
    123995658
Enzymes [BR:ogo01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     123995658
Chromosome and associated proteins [BR:ogo03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     123995658
   HDAC complexes
    Sin3A-HDAC complex
     123995658
    BRAF-HDAC complex
     123995658
    REST complex
     123995658
    SHIP complex
     123995658
    MiDAC complex
     123995658
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     123995658
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    123995658
  Chromatin remodeling factors
   NuRD complex
    123995658
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 123995658
NCBI-ProteinID: XP_046155264
LinkDB
Position
LG14:48318177..48326420
AA seq 468 aa
MAYTVAGGTKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHK
ATAEEITKYHSDDYIQFLQSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGST
AGSVKLNRQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYVDIDIH
HGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGVDDESYE
LIFKPVMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIRGHAKCVEYIKSFNLPLLML
GGGGYTIRNVARCWTYETAVALDTEIPDELPYNDYFEYFGPDFKLHISPSNMTNQNTLEY
MDKIKQRLFENLRMLPHAPGVQMQTVPEDAITDDTVDEDAEDPDKRMSIRASDKRIACDE
EFSDSEDEGEGGRRNEANHKKGTKRTRVEEGDKEKVEVEKSKETSTEN
NT seq 1407 nt   +upstreamnt  +downstreamnt
atggcttacaccgttgcaggtggaaccaagaagaaagtctgctactactatgacggtgac
attggcaattactattatggacaagggcatcccatgaaaccacaccgaattcgaatgacc
cacaacctactgttgaactatggactgtacagaaaaatggaaatatatagaccacacaaa
gccactgcagaggaaattaccaaataccacagtgacgattacatccagttcctccaatcc
atacgaccagacaacatgtcagagtacagcaagcaaatgcagcggtttaatgttggtgag
gattgtcctgtatttgatgggttgtttgagttctgccagttgtctaccggtggctctact
gcgggatcggtgaaactcaacaggcagcagacggacattgcagtgaactgggccggggga
ctccaccacgctaagaagtctgaggcctctggcttttgttacgtcaatgacattgtgttg
gccattctagagctcctcaagtatcatcagagggtactgtacgtagatattgacatccac
catggggatggagtagaggaagccttctacaccacagacagggtcatgactgtgtccttc
cacaaatacggagagtacttccctgggactggagacctcagggatattggtgcaggaaaa
ggcaaatactacgctgtcaacttccccctgagggacggcgttgacgatgagtcgtatgag
ctgatcttcaagcctgtgatggccaaggtgatggagatgtaccagcccagtgcagtggtt
ctgcaatgtggagcagactctctctcaggagaccgactgggctgcttcaaccttaccatc
cgcggccatgcaaagtgtgttgagtacattaagtcgttcaaccttcccctactaatgctg
ggtggcggaggctacaccatccgcaacgtggcccgctgctggacctacgagacggccgtg
gctctggatactgagatccctgacgaactgccatacaatgattactttgagtactttggg
cctgacttcaagttgcacatcagcccatccaacatgaccaaccagaacacgttggagtac
atggataagatcaagcagcgtctgtttgagaacttgcggatgctacctcacgccccggga
gtgcagatgcagacggtccctgaagacgccatcactgacgatacggtggatgaggatgca
gaggaccccgacaaacgcatgtccatccgtgcttcagacaagaggatagcctgcgacgag
gagttctccgactctgaggacgagggagagggaggaaggaggaacgaagccaatcacaag
aaaggaacaaaacggactcgagttgaggagggagacaaagagaaagttgaggtggagaaa
tcgaaggaaaccagcactgagaactga

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