Oncorhynchus gorbuscha (pink salmon): 123995658
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Entry
123995658 CDS
T07892
Name
(RefSeq) histone deacetylase 2
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03082
ATP-dependent chromatin remodeling
ogo03083
Polycomb repressive complex
ogo04110
Cell cycle
ogo04330
Notch signaling pathway
ogo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123995658
03083 Polycomb repressive complex
123995658
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
123995658
04350 TGF-beta signaling pathway
123995658
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
123995658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
123995658
Enzymes [BR:
ogo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
123995658
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
123995658
HDAC complexes
Sin3A-HDAC complex
123995658
BRAF-HDAC complex
123995658
REST complex
123995658
SHIP complex
123995658
MiDAC complex
123995658
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
123995658
Heterochromatin formation proteins
Other heterochromatin formation proteins
123995658
Chromatin remodeling factors
NuRD complex
123995658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
123995658
NCBI-ProteinID:
XP_046155264
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All DBs
Position
LG14:48318177..48326420
Genome browser
AA seq
468 aa
AA seq
DB search
MAYTVAGGTKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHK
ATAEEITKYHSDDYIQFLQSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGST
AGSVKLNRQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYVDIDIH
HGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGVDDESYE
LIFKPVMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIRGHAKCVEYIKSFNLPLLML
GGGGYTIRNVARCWTYETAVALDTEIPDELPYNDYFEYFGPDFKLHISPSNMTNQNTLEY
MDKIKQRLFENLRMLPHAPGVQMQTVPEDAITDDTVDEDAEDPDKRMSIRASDKRIACDE
EFSDSEDEGEGGRRNEANHKKGTKRTRVEEGDKEKVEVEKSKETSTEN
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcttacaccgttgcaggtggaaccaagaagaaagtctgctactactatgacggtgac
attggcaattactattatggacaagggcatcccatgaaaccacaccgaattcgaatgacc
cacaacctactgttgaactatggactgtacagaaaaatggaaatatatagaccacacaaa
gccactgcagaggaaattaccaaataccacagtgacgattacatccagttcctccaatcc
atacgaccagacaacatgtcagagtacagcaagcaaatgcagcggtttaatgttggtgag
gattgtcctgtatttgatgggttgtttgagttctgccagttgtctaccggtggctctact
gcgggatcggtgaaactcaacaggcagcagacggacattgcagtgaactgggccggggga
ctccaccacgctaagaagtctgaggcctctggcttttgttacgtcaatgacattgtgttg
gccattctagagctcctcaagtatcatcagagggtactgtacgtagatattgacatccac
catggggatggagtagaggaagccttctacaccacagacagggtcatgactgtgtccttc
cacaaatacggagagtacttccctgggactggagacctcagggatattggtgcaggaaaa
ggcaaatactacgctgtcaacttccccctgagggacggcgttgacgatgagtcgtatgag
ctgatcttcaagcctgtgatggccaaggtgatggagatgtaccagcccagtgcagtggtt
ctgcaatgtggagcagactctctctcaggagaccgactgggctgcttcaaccttaccatc
cgcggccatgcaaagtgtgttgagtacattaagtcgttcaaccttcccctactaatgctg
ggtggcggaggctacaccatccgcaacgtggcccgctgctggacctacgagacggccgtg
gctctggatactgagatccctgacgaactgccatacaatgattactttgagtactttggg
cctgacttcaagttgcacatcagcccatccaacatgaccaaccagaacacgttggagtac
atggataagatcaagcagcgtctgtttgagaacttgcggatgctacctcacgccccggga
gtgcagatgcagacggtccctgaagacgccatcactgacgatacggtggatgaggatgca
gaggaccccgacaaacgcatgtccatccgtgcttcagacaagaggatagcctgcgacgag
gagttctccgactctgaggacgagggagagggaggaaggaggaacgaagccaatcacaag
aaaggaacaaaacggactcgagttgaggagggagacaaagagaaagttgaggtggagaaa
tcgaaggaaaccagcactgagaactga
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