Oncorhynchus gorbuscha (pink salmon): 123995719
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Entry
123995719 CDS
T07892
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5-like
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
123995719
Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
123995719
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
LRR_5
ig
LRR_9
Ig_2
fn3
Sp38
DHU1_N
C2-set_2
Motif
Other DBs
NCBI-GeneID:
123995719
NCBI-ProteinID:
XP_046155346
LinkDB
All DBs
Position
LG14:complement(65134883..65162335)
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AA seq
773 aa
AA seq
DB search
METLLVYLMVLGMAVKAHKVQVCPKRCVCQMLNPNLATLCDKKGLLFVPPDIDRHTVEMR
LGDNFVTSIKRRDFANMTKLQDMTLSRNTIGSISPHAFKDLENLRALHLDSNRLTRLTND
TFSGMSKLQHLILNNNQLIHIHIGAFNDLTALEELDLSYNNLESAPWVAIQRMTSLHTLG
LDHNMLSYIPEGTFSGLQKLKRLDVTSNKLQKLPPDPVFQRAGVLATSGSLGPTSFALSF
GGNPLRCNCELLWLRRLRREDDLETCAAPQHLAGRYFWTVSEEEFLCEPPLITRHSQELR
ALEGQSVALRCKARGDPDPIIHWIAPDGRLMSNSSRAAVHSDGTLDILISTVKDSGSFIC
VASNPAGESQQTVDLVIAKLPHITNSTVEKEQDPGSSDIATVTRTGGGGEGGGVVPLGNT
KTSQEKKVVIAEATSTSALVKFSFQRSIPGIRMFQIQYNGTYDDSLVYRMIPPSSKSILV
NNLAAGTQYDLCVLAIYDDLVTSLTATRVVGCVRFTTDPQYLRCHFMQSQFLGGTIVVII
GGIIVASVLAFIVFLIVRYRVCNQGDEDKALEMGEIRSLNSDGQLQGCGVPKSMSKSLSK
QILCLEKPEKVDKEYLRVGLPPPELFKQQRPPVLTTTTSTKPSIPDCQTDVELENTNRNN
SAEAKMVVSAVSTKWTKVARGPSPPGGSSNHYMTVPAGGVRVNRRHSLNMDLYKECCYFS
LVQQQQPKPGRGLRSKRSLSMSGELPQLESAMANIRRSRDKLYGSEWLLESTL
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggagaccctgttagtttacctgatggtacttggcatggctgtaaaagcccacaaggtc
caggtgtgcccaaaacgctgtgtctgccagatgcttaaccccaacctagcaaccctctgt
gacaagaagggcctcctcttcgtcccgcccgacatcgaccgtcacaccgtggagatgcgt
ctgggcgacaacttcgttacgagcatcaaacgacgggacttcgccaatatgaccaaactg
caagacatgacgttgtctcggaacaccattggctccatctcgcctcatgcctttaaagat
ctggagaacctcagagccttgcatctggacagcaaccgtttgacgaggctcaccaacgac
accttcagtgggatgtccaagctccaacatctcattctcaacaacaatcagctgattcac
atccacatcggggccttcaatgatctcacagctctagaggagttagatctgtcctacaac
aacttagaaagcgccccctgggtggccatccagagaatgaccagcctccacaccctgggc
ttggaccacaacatgcttagctacattcctgagggaaccttctctggcctgcagaagctc
aaacgccttgatgtcacatctaacaagctccagaagcttccgccagacccagtgttccaa
cgggccggtgtcttggccacatcagggagcttgggtccgacgtcatttgcgttgagtttt
ggggggaacccactgaggtgtaactgtgagctgctgtggctgaggaggctgaggagggag
gatgatctggagacatgtgcggctccgcagcacctggctgggcgatacttctggaccgtg
tctgaagaagagttcctctgtgagccccctcttatcaccagacactcccaggagctgcga
gcgttggagggtcagagtgtagctctgcgctgtaaggccaggggcgacccagaccccatc
atccactggatcgccccagacggccggctcatgtccaactcctcccgggctgcggtgcac
agtgatgggaccctggacattcttatcagcactgtgaaggactcaggctccttcatctgt
gttgcctccaacccggccggggagtcccaacaaactgttgacctggtgattgccaaactc
ccacacatcaccaacagtactgtggagaaggaacaggacccaggttcttctgatatcgcc
acggtaacgaggacgggtggtggtggggaaggcggaggagtggttccactgggaaacaca
aagacgagccaggagaagaaggtggtgatcgctgaggccacgtctacctcggccctggtc
aaattcagcttccagagaagtataccgggcattcgaatgttccagatccaatacaacgga
acctacgatgactctctggtttacagaatgatccctccgagcagtaagagtatcctggtg
aacaacctggctgccggtacacagtacgacctgtgtgtgctggccatctacgacgacctg
gtgacctccctgaccgccacgcgggtggtggggtgcgtccgcttcaccaccgatccccag
tacctccgctgccacttcatgcagtcccagttcctgggagggaccatcgtggtcatcatc
ggagggatcatcgtggcgtccgtcttagccttcatcgtcttcctcatagtgaggtaccga
gtctgtaaccaaggcgatgaggacaaggctttggaaatgggtgagatccggtctctgaat
agtgatggtcagctccagggctgcggcgtccccaagtccatgtccaagtctctgtccaag
cagattctctgtctggagaaaccagagaaggtggataaggagtatctgagggtgggcctt
cctccccctgagctgttcaagcagcagcgacccccagtcctgaccaccaccacatccacc
aagccatccattcccgactgccagacagatgtggagttagagaacacaaaccggaataac
tcagcggaagctaaaatggttgtttctgccgtttccacaaaatggacaaaggtcgctaga
gggccaagcccccctggagggtcctccaaccattacatgacagtgccagcagggggcgtg
agggtgaaccggcggcactctctgaacatggacttgtacaaggagtgctgctacttcagc
ctggtacagcagcagcagccaaaacctggtaggggtttgcgctccaaacgcagtctgtcc
atgagtggagaactgccccagttggaaagtgcaatggcaaacatacgcagaagcagagac
aagctgtatggatccgagtggcttctcgaaagcactctatga
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