Oncorhynchus gorbuscha (pink salmon): 123995837
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Entry
123995837 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: exportin-T-like
KO
K14288
exportin-T
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123995837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ogo03016
]
123995837
Transfer RNA biogenesis [BR:
ogo03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
123995837
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Exportin-T
Xpo1
IBN_N
CRM1_C
RIX1
Thump_like
OrgC
HbrB
Motif
Other DBs
NCBI-GeneID:
123995837
NCBI-ProteinID:
XP_046155475
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All DBs
Position
LG14:408869..466927
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AA seq
979 aa
AA seq
DB search
MACQSVSIINMDEQALLGLNPNADACYRQKAMVYFEQLKESQDAWEVCAEALAKGIYSDD
HVKFFCFQVLEHQIKYRHGGLSPAQQQLIRETLMKWLQGQLMNSQPEKPFIRNKAAQVFA
LTFVMEYLTHWPKFFFDLLSLVGLNPHGVDVYLRTLMAIDAEVVDRDILHSPEEVRRNTL
IKDGMREQVIPSLVESWYQILGAYQQSHPEITCQCLEVVGAYVSWIDLNLIANDRFVNLL
LSQMSVEDLREEACDCLFEIVNKGMDPTDKTKLVEXLCQVLQSAGFFNVDQEEDVDFLAK
FSRLVNGMGQSLVLSWTKLAKGGDVKAAAEALRALETKVPLLLQLLVHIGSEWQSHMPQV
GRRGGQEAIEESWDSDKFPLLTDQQKTHVEDIMLAVMKKLTYDEEYNFDNEGEDEAMFVE
YRKQLKMLLDRLAQVSPDLLLEAVGRVFNNTIQRWQTASFMEVEVAIRLLYMLGEALPAS
HGAHFSGDTAKTSALQDMMRTLVSSGLSGYRHTSVSLEFFETVVXLRKFFLVEPQHIPNV
LMSFLDHRGLRHSSPKVRSRVAYLFSRFVKTLHKHMNSFIEDILSRIQDLLELAPPENGF
PALLTSDDQLFIFETAGVLIVHGESPAERKQALMRSLLTPLTDAFRLLLAKLASEREEER
QAALADCLSHAVGFASRTSKAFSNKQTVKQCGCTEVYRDCLQSFLPALSCPVQRGSLRSA
VRSFLHRMIICLEEEVLPFVPAASEHMLKDCEAKDLQEFIPLISQITAKFKDQVSPFLQQ
VFMPLVLAIFEVLCRPAEDNDQAAALEKHMLRRSYFTFIQTITSSGMNEVLANQGVENVE
RVLFTIIQGAVDFPDPIAQKTCFIILSKLVELWGGKDGMAGFPDFMYKHIVPACFLAPLK
PSFDLTDAQTVLTLSECALTLKMIHLRRGPEFIQYLQQEYLPSLQVSPDIAQEVCQVLQQ
PDAKVLKNYMKAFFQRAKL
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggcctgccagtctgtctccatcatcaacatggacgagcaggccctgctggggctcaac
cctaatgcagacgcctgctataggcagaaggcgatggtgtattttgagcagttgaaggag
tcccaggatgcctgggaggtgtgtgcagaggccctggctaaaggcatttacagtgacgac
catgtgaagttcttctgtttccaagtcctggagcaccagatcaagtacaggcatggaggg
ctcagtcctgcccagcaacagctgatcagagaaaccctgatgaagtggctacagggtcag
ttaatgaactcccaaccagagaagccgttcatccgtaacaaggcagcccaggtgtttgct
ctgaccttcgtgatggagtacctgacccactggcccaagttcttcttcgacctgctgtct
ctagtgggcctgaatccgcacggggtcgacgtctacctcagaacactgatggctatcgac
gctgaggtggtggacagagacatcctgcactcccctgaggaggttcgtaggaacacatta
ataaaggatggtatgagggagcaggtcatccccagcctggttgagtcctggtaccagatc
ctcggggcctatcagcagtctcaccctgagatcacttgtcaatgtctggaggtagtgggg
gcatacgtctcctggatagacctcaacctcatcgccaacgacaggtttgtgaacctgctg
ctgagtcagatgtctgtggaggacctgagagaggaggcgtgtgactgtctgtttgagatt
gtcaataaaggaatggacccgacagacaagaccaagctggtggagntcctctgtcaggtc
ctgcagtcggctggcttcttcaacgtggaccaggaggaggatgtggacttcctggctaag
ttctccaggctggtgaacgggatgggccagtctctggttctgagctggaccaaactggcc
aaggggggcgacgtgaaggcagccgccgaggcgctgcgtgccctcgagaccaaggtccct
ctgctcctccagctgctggtccacatcgggtccgagtggcagagtcacatgcctcaggta
gggaggagaggaggacaggaggccattgaagagtcctgggactcagacaagtttccgctg
ctgacagaccaacagaagactcacgttgaggacatcatgttggccgtcatgaagaaacta
acttatgatgaagagtacaactttgacaacgaaggggaggatgaagcgatgtttgtagag
tacaggaaacagttgaagatgctgttggaccgcctggctcaggtgtctcctgacctgctc
ctggaagctgtaggcagagtcttcaacaacaccatacagcgttggcagacggcgtccttc
atggaggtggaggtggccatcaggctgctgtacatgctaggagaggctctgcctgcgtct
cacggagctcacttctctggcgacacggccaagacctccgccctgcaggacatgatgaga
acgctggtctcctctggtctcagtggttaccgacacacgtctgtgtcgctggagttcttc
gagacggtggttnncttacgcaagttcttcctggttgaacctcagcacattcccaacgtc
ctgatgtcctttctggaccatcggggtctgagacacagcagtcctaaggtccgtagcaga
gtggcctacctcttctcacggttcgtcaagacactgcataaacacatgaactccttcatt
gaagacatcctgtccaggatacaggacctgctggagctagctcctcctgagaacggtttc
cctgcgctgctgaccagcgatgaccagctgtttatatttgagacggcgggggtgttgatc
gtccacggagagagtcccgcggagaggaagcaggctctgatgagatccctgctgaccccg
ttgaccgacgccttccgtctgctgctggccaaactggcctctgagagggaggaggagagg
caggctgcgctggccgactgtctgagtcacgctgttggcttcgctagtcgtaccagtaag
gcgttcagcaacaagcagacagtgaagcagtgtggatgtactgaagtctacagagactgt
ctgcagagcttcctgcctgcactgagctgtcctgtccagagggggtctctgcgtagcgct
gtccgctccttcctgcaccgcatgatcatctgtctcgaagaagaggtcctgcccttcgtc
cctgcggcatcggagcacatgctgaaggactgcgaggccaaggaccttcaggagtttata
cccctcatcagtcagatcaccgctaagttcaaggaccaggtgtctccgttcctgcagcag
gtgttcatgcctctggtcctggccatctttgaagtgttgtgtcgacctgctgaggacaac
gaccaggcagcagctctggagaaacacatgttacgtagaagctacttcaccttcatacag
acgataacctccagtgggatgaacgaagtcctggccaaccagggtgttgagaacgtagag
cgggttctgttcaccatcatccagggagctgtcgacttccccgaccccatcgcccagaag
acctgcttcatcatcttgtccaagctggtggaactctggggaggtaaagacggtatggct
ggtttcccagacttcatgtataaacacatcgtcccagcatgcttcctggctcctctcaaa
ccatcctttgatctcacagacgctcagaccgtcctgacgttgtcagagtgtgctctgacg
ttgaaaatgattcatctcagaaggggtccggagtttatccagtaccttcaacaggagtac
ctcccttctctacaggtgtcacctgacatcgcacaggaagtgtgccaagtgcttcagcag
ccagacgccaaggtcctcaaaaactacatgaaggctttctttcagcgagccaaactgtaa
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