Oncorhynchus gorbuscha (pink salmon): 123995969
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Entry
123995969 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase makorin-1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
123995969
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123995969
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123995969
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-RING_2
zf-CCCH_3
zf-C3HC4
zf-CCCH_9
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
123995969
NCBI-ProteinID:
XP_046155575
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Position
LG14:2220724..2274405
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AA seq
445 aa
AA seq
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MAEAAATAAPAIPGAWTKHVTCRYFMHGLCKEGINCRYSHDLNTSQPAAAMICKFFQKGN
CVFGDRCRFEHSKEDVPGPKPSLPPPACALLTPTSLAASAPAAVPSGSAGGESADGPENP
HGSGAGDWVMAAEFVPGQPYYCGRDPVKSKGSGMSPLMEREKDPAGDDKELRKTLCPYAA
MGECRYGLNCSYLHGDVCDMCGLQVLHPSNDAQRSEHTKACIEAHEKDMELSFAIQRSKD
MQCGVCMEVVFDKANPSERRFGILSNCCHCYCLKCIRKWRSAKTFESKIIKSCPECRITS
NFVIPSEYWVEDKEDKQKLIQKYKDGMGTKACRYFDQGRGTCPFGANCFYKHAFPDGRLE
EPQRRPTGCNGRNREDICTPLWDLFEERENSSSLDNEDEEMVTFELSEMLLMLLAAGTDV
LTITDSEDEWDLFHEELDDIYEIYL
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagcagcaacagcggctccagcaataccaggagcctggaccaaacacgtc
acctgcaggtatttcatgcatgggctttgcaaagaaggcatcaactgtcgatattcccat
gatctcaacaccagtcaaccagctgcagctatgatttgcaagttctttcagaaaggaaac
tgtgtgttcggcgaccggtgcaggtttgaacactctaaagaagacgtgcctgggcccaag
ccgtcgctgccacctcctgcctgcgcccttctcactcctacgtcccttgccgccagcgct
ccagccgccgttcctagtggatcggcgggtggtgagtcggcagacggcccagagaaccct
catggatcaggcgcaggggactgggttatggcggcagagtttgtaccaggccagccttac
tattgtggaagggacccggtgaagtctaaagggtcggggatgagtcctctgatggagcga
gagaaagacccggcgggagacgataaggagctgaggaagactctgtgtccctacgccgcc
atgggggagtgtcgctacggacttaactgttcctatctccacggcgacgtgtgtgacatg
tgcggtctgcaggtgctccacccctccaacgacgcacagcgatcagaacacaccaaggct
tgcatcgaggcccatgagaaggacatggagctgtcgtttgccatccagcgcagtaaggac
atgcagtgtggcgtgtgtatggaggtggtgtttgacaaggccaaccccagtgagagacgc
ttcggcatcttgtccaactgctgccactgctactgcctcaagtgcatccgcaagtggagg
agcgccaagacgttcgagagcaagatcatcaagtcctgtccagagtgtcggataacgtcc
aacttcgtcatccccagtgagtactgggtggaggacaaggaagacaagcagaaactgata
cagaaatacaaggatggcatggggactaaagcctgtcgttacttcgaccagggtcggggc
acctgcccgtttggcgccaactgcttctacaaacacgccttccctgacgggcgtctggag
gagccccagaggagaccaacagggtgcaacggcaggaacagggaggacatatgtacaccc
ctgtgggacctgtttgaagagcgggagaacagcagttctttggacaacgaggacgaggag
atggtgacctttgaactgagcgagatgctcctcatgctcctcgccgcgggaaccgatgta
ctgacgatcacggactcggaggacgaatgggacttgtttcacgaagagctggacgatatc
tacgagatttacctatag
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