Oncorhynchus gorbuscha (pink salmon): 123995982
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Entry
123995982 CDS
T07892
Name
(RefSeq) TBC1 domain family member 15-like
KO
K20168
TBC1 domain family member 15
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
123995982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
123995982
Membrane trafficking [BR:
ogo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
123995982
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH_RBD
Motif
Other DBs
NCBI-GeneID:
123995982
NCBI-ProteinID:
XP_046155588
LinkDB
All DBs
Position
LG14:3438130..3529015
Genome browser
AA seq
686 aa
AA seq
DB search
MATPAGFKVLYEHDGVFIHTNPERSEEQDSLTSGSLRVLDQDGDIVLEYKPMEDVDHSAM
LCAAKESSSVFEWGQRHQGGSQDPGDKPTRQVEHQLSCETEWDMVHTVQFRKKPSNHEGA
PPQPAPIPEKSKVSRLFFRLSDLASVRVKEEGWSYLVFTLRDHNMGVELPALHFHQGGSD
VFLDCLRKYMLLTESTTDASLLQVSPHSRALSQSFENLLDDATFGLITKFSQDPVTTTLG
GFSKVTNYLYDAFRGPDTVLLKQRPVGEVADLLNEAIPGLDINQLEEPGFEVITRIDLGV
LPAVRRREPVGAEEWNSNMDPEGLCEEHLGHLKHIIFKGGLCHVLRKEGWKFLLGYFPSE
STLEERRSLTRRKTDEYFRMKLQWKSVSEEQEKRNSMFRDHRSLIEKDVNRTDRTNAFYE
GQDNPGLILLHDVLMTYCMYDFDLGYVQGMSDLLSPILYVMEDEVDAFWCFVSFMDQMHQ
NFEEQMQGMKTQLIQLSTLLRLLDLSFWNYLVAQDSGHLYFCFRWLLIRFKRELSFPDVL
RLWEVMWTGLPCQNFHLLVCCAILDSEKHQIMEKQYGFNEILKLINELSMKLDIRAILNK
AEAICLQLKSCKDLPNSVVEMLGFNSTDTESSSQSEDTERTDRPDSPEPSTPSDDQQDLV
SEYNPSGNNGHLRDAARDVYKLAYIS
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcgactccagcgggtttcaaggttctatatgagcatgatggagtttttatacacacc
aacccagaaaggagtgaggagcaggattctctgacttcaggatccctgcgtgtcctggac
caggatggagacatagtgctggaatataaacccatggaggatgttgaccactctgccatg
ctgtgtgctgccaaggagtctagctctgtgtttgaatggggccagaggcaccagggcggg
agccaagacccaggagacaagcctaccaggcaggtggagcaccagctgagctgtgagaca
gaatgggacatggttcacactgttcagttcaggaagaaacccagcaaccatgaaggtgct
cctcctcaacccgctcccatcccagagaagagtaaggtttcccggctgttcttccgtctc
agtgacctggcctcggtcagggtgaaggaggagggctggtcctacttggtgttcaccctc
agagaccacaacatgggggttgagctgcctgccctacactttcaccaggggggtagtgac
gtcttcctggactgtctcaggaagtacatgctgctgacagagtctaccacagatgcctcc
ctcctccaggtcagcccccacagcagagctctgtcccagtcctttgagaacctgctagat
gatgccaccttcggtcttattacgaagttttctcaggacccagtcaccactacgctgggt
ggtttctccaaggtgaccaactacctgtatgatgcgttccggggtccagacacggtgcta
ctgaagcagaggcctgtcggggaggtggctgacctgctgaatgaggccatacctggtctg
gacatcaaccagctggaggaaccaggctttgaggttatcaccaggattgatcttggcgtg
ctgccagcggtccggcgtagggagcctgttggggcggaggagtggaactccaacatggac
cctgagggactgtgtgaggaacatctggggcaccttaaacatatcatattcaaagggggt
ctgtgtcacgtgttgaggaaggagggatggaagtttctgctgggctacttcccctcggag
agcaccctggaggagaggaggagtctgaccaggaggaaaacggatgagtacttccgtatg
aagctccagtggaagtcagtgagtgaggagcaggagaaacgcaacagcatgtttagagac
cacaggagtctaatagagaaagacgtgaacaggaccgatcggaccaacgctttctatgaa
ggacaagacaacccaggactgatcctgctgcacgatgtcctcatgacctactgcatgtat
gactttgacctgggctatgtccagggtatgagtgacctgctgtctccgatcctctatgtg
atggaggacgaggtggacgccttctggtgctttgtctccttcatggaccagatgcaccag
aactttgaggagcagatgcagggaatgaagactcaactgatccagctcagcactctgcta
cgactactggacctgtccttctggaactacctggtggcccaggactctggtcacctgtac
ttctgctttcgctggctcctgattcgcttcaagagagaactgagtttccctgatgtcctg
cgtctttgggaggtaatgtggaccgggctgccgtgccagaacttccacctgctggtgtgc
tgtgccatcctggactcagagaaacaccagattatggagaaacaatatggcttcaatgag
atcctcaagctcataaatgaactgtcgatgaaactggacatcagggccatcctcaacaaa
gctgaagctatatgcctgcagctgaagagttgtaaggatttgcccaactccgtggttgag
atgcttggattcaacagcacagacactgagtcatcatcccagtcagaggacactgagaga
acggacagaccggactctcccgaaccttctacaccgtcagacgaccagcaggacttagtc
tctgagtacaaccccagcggcaacaacggacacttacgggacgcagcgcgtgacgtttac
aaattagcctacatatcgtag
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