Oncorhynchus gorbuscha (pink salmon): 123995983
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Entry
123995983 CDS
T07892
Name
(RefSeq) TBC1 domain family member 15-like isoform X1
KO
K20168
TBC1 domain family member 15
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
123995983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
123995983
Membrane trafficking [BR:
ogo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
123995983
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH_RBD
Motif
Other DBs
NCBI-GeneID:
123995983
NCBI-ProteinID:
XP_046155589
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All DBs
Position
LG14:complement(3862004..3946135)
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AA seq
685 aa
AA seq
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MATPAGFKVLYEHDGVFIHTNPERSEEQDSLTSGSLRVLDQDGDIVLEYKPMEDVDHSAM
LCAAKESSSVFEWGQRHQGPSQDPGDKPTRQVEHQLSCETEWDMVHTVQFRKKPSNHEGA
PPQPAPIPEKSKGSRLFFRLSDLDSVTVKEEGWSYLVFTLRDHNMGVELPALHFHQGGSE
VFLDCLRKYMLLTESTTDASLLQVSPHSRALSQSFENLLDDATFGLITKFSQDPVTTTLG
GFSKVTNYLYDAFRGPDTVLLKQRPVGEVADLLNEAIPGLDINQLEEPGFEVITRIDLGV
LPAVRRREPVGAEEWNSNMDPEGRMRNISHLKHIIFKGGLCHVLRKEGWKFLLGYFPWES
TLEERRSLTRRKTDEYFRMKLQWKSVSEEQEKRNSMFRDHRSLIEKDVNRTDRTNAFYEG
QDNPGLILLHDVLMTYCMYDFDLGYVQGMSDLLSPILYAMEDEVDAFWCFVSFMDQMHQN
FEEQMQGMKTQLIQLSTLLRLLDLSFWNYLVAQDSGHLYFCFRWLLIRFKRELSFPDVLR
LWEVMWTGLPCQNFHLLVCCAILDSEKHQIMEKQYGFNEILKLINELSMKLDIRAILNKA
EAICLQLKSCKDLPNSVVEMLGFNSTDTESSSQSEDTERTDRPDSPEPSTPSDDQQDLVS
EYNPSGNNGHLRDAARDVYKLAYIS
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggcgactccagcgggtttcaaggttttatatgagcatgatggagtttttatacacacc
aacccagaaaggagtgaggagcaggattctctgacttcaggatccctgcgtgtcctggac
caggatggagacatagtgctggaatataaacccatggaggatgttgaccactctgccatg
ctgtgtgctgccaaggagtctagctctgtgtttgaatggggccagcggcaccagggtccg
agccaagacccaggagacaagcctaccaggcaggtggagcaccagctgagctgtgagaca
gaatgggacatggttcacactgttcagttcaggaagaaacccagcaaccatgaaggtgct
cctcctcaacccgctcccatcccagagaagagtaagggttcccggctgttcttccgtctc
agtgacctggactcggtcacggtgaaggaggagggctggtcctacctggtgttcaccctc
agagaccacaacatgggggttgagctgcctgccctacactttcaccaggggggtagtgaa
gtcttcctggactgtctcaggaagtacatgctgctgacagagtctaccacagatgcctcc
ctcctccaggtcagcccccacagcagagctctgtcccagtcctttgagaacctgctagat
gatgccaccttcggtcttattacgaagttttctcaggacccagtcaccactacgctgggt
ggtttctccaaggtgaccaactacctgtatgatgcgttccggggtccagacacggtgcta
ctgaagcagaggcctgtcggggaggtggctgacctgctgaatgaggccatacctggtctg
gacatcaaccagctggaggaaccaggctttgaggttatcaccaggattgatcttggcgtg
ctgccagcggtccggcgtagggagcctgttggggcggaggagtggaactccaacatggac
cctgagggacgcatgaggaacatctcacaccttaaacacatcatattcaaagggggtctg
tgtcacgtgttgaggaaggagggatggaagtttctgctgggctacttcccctgggagagc
accctggaggagaggaggagtctgaccaggaggaaaacggatgagtacttccgtatgaag
ctccagtggaagtcagtgagtgaggagcaggagaaacgcaacagcatgtttagagaccac
aggagtctaatagagaaagacgtgaacaggaccgatcggaccaacgctttctatgaagga
caagacaacccaggactgatcctgctgcacgatgtcctcatgacctactgcatgtatgac
tttgacctgggctatgtccagggtatgagtgacctgctgtctccgatcctctatgcgatg
gaggacgaggtggacgccttctggtgctttgtctccttcatggaccagatgcaccagaac
tttgaggagcagatgcagggaatgaagactcaactgatccagctcagcactctgctacga
ctactggacctgtccttctggaactacctggtggcccaggactctggtcacctgtacttc
tgctttcgctggctcctgattcgcttcaagagagaactgagtttccctgatgtcctgcgt
ctttgggaggtaatgtggaccgggctgccgtgccagaacttccacctgctggtgtgctgt
gccatcctggactcagagaaacaccagattatggagaaacaatatggcttcaatgagatc
ctcaagctcataaatgaactgtcgatgaaactggacatcagggccatcctcaacaaagct
gaagctatatgcctgcagctgaagagttgtaaggatttgcccaactccgtggttgagatg
cttggattcaacagcacagacactgagtcatcatcccagtcagaggacactgagagaacg
gacagaccggactctcccgaaccttctacaccgtcagacgaccagcaggacttagtctct
gagtacaaccccagcggcaacaacggacacttacgggacgcagcgcgtgacgtttacaaa
ttagcctacatatcgtag
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