Oncorhynchus gorbuscha (pink salmon): 123996008
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Entry
123996008 CDS
T07892
Name
(RefSeq) cyclic nucleotide-gated channel cone photoreceptor subunit alpha-like isoform X1
KO
K04950
cyclic nucleotide gated channel alpha 3
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogo04040
]
123996008
Ion channels [BR:
ogo04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
123996008
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
RR_TM4-6
CDC45
Borrelia_P83
Ion_trans_2
NPR3
DUF2828
ANKRD13_C
RNA_polI_A34
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
123996008
NCBI-ProteinID:
XP_046155594
LinkDB
All DBs
Position
LG02:complement(2307789..2329726)
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AA seq
727 aa
AA seq
DB search
MAKICTDQSYPATTRQRPSLCTPNDNLDTIENGTPRSNSEDTSSEIQGSASVLTIIHPES
HRDSFTGSGALTRMHREVERPDSFLERFRTPGLKEASGRESNAQSLGYPERVRKRNQVSQ
WPLAMYNMNNCNNTDDKKDDKKDEIKKEEKKQEDEKKEEEKEDKKEDEKEEKKEEEPKKE
EPKKEEPKKEEKKKEEPPKEIWIMDPSADKYYTWLTIIAAPCFYNLMMLVTRACFNELQN
TYTMLWIVLDYTSDFVYYADTFVRSRTGYLEQGLLVKDKQKLLDKYRQTEQFKWDIISMI
PTDLLFLKVGINNPELRLNRLAKMNRLFEYFDRTETRTSFPNVFRISNLVLYILIIIHWN
ACIFFALSKTIGFGSDTWVYPNISHPEHGRLARKYIYCLYWSTLTLTTIGETPPPVRDFE
YLFVVADFLIGVLIFATIVGNVGAMISNMNKNRADFQAKIDSIKQYMQFRKVSKDLEARV
IKWFDYLWTEKKTCDEKEVLKNLPDKLKAEIAIDVHLDTLKKVKIFQECEAGLLIELVMK
LQPQVFSPGDYICKKGDIGREMYIIKEGKLAVVAEDGVTQWCVLSDGAYFGDISILGIKG
SKAGNRRTANIRSVGYSDLFALSKDDLMEALTEYPEAKKILEEKGKATLMKDNMIDEEIA
NAGADPKDMEEKILRLESNMEIMTSKLAKIMAEFTSGQGKIKQRITDMESTVKSVRPEDI
SEVVADK
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagatctgcacagaccagtcctacccggcaacgacccggcaacggccatctctc
tgcacgccaaatgacaatctggacaccattgagaacggaaccccaaggtccaactcagag
gacacctcgtcagagattcagggttctgcctccgtgttaaccatcatacacccagagtct
cacagagattccttcacagggtcaggagccctgaccagaatgcaccgcgaggtggagaga
ccggactccttcctggagcgcttcaggacccctgggctcaaagaggcctccggcagagag
agcaacgcacagtcactgggataccccgaaagagtccgcaagaggaaccaagtcagtcaa
tggccgctggctatgtacaatatgaacaactgcaacaacacagatgacaaaaaagatgac
aagaaggacgaaataaagaaagaggaaaaaaaacaggaagatgagaagaaagaggaggag
aaagaagataagaaagaggacgagaaagaggagaagaaagaggaggagcctaagaaggag
gagcctaagaaggaggagcctaagaaggaggagaagaagaaggaggagcccccgaaagag
atttggatcatggacccatcagcagacaaatactacacatggctcaccatcatagcagca
ccatgtttctacaacctgatgatgctagtgaccagggcatgttttaacgaactccagaac
acatacacaatgctgtggattgtcctggactacacctcagactttgtctactacgcagac
acattcgtcaggtctagaacaggttatttggaacaggggctgcttgtgaaagacaaacaa
aagcttctagacaaatacagacaaacggaacagttcaaatgggacataatttcaatgata
cccacagacctgctttttctgaaagtgggcatcaacaaccccgagctcagactgaaccgg
cttgcaaagatgaaccgcctctttgagtactttgaccgcacagaaaccagaaccagcttc
cccaacgttttccgaatcagcaacctggtactttacatcctgatcatcatccactggaac
gcctgcatcttcttcgccctctccaagaccatcgggttcgggtccgacacctgggtgtac
ccaaacatcagtcaccctgagcacggccgccttgccaggaagtacatctactgtctctat
tggtcgaccctgaccctgaccaccatcggagaaaccccgccccccgtcagggactttgag
tacctcttcgtggtcgccgacttcctcatcggcgtgctgattttcgccaccattgtcggt
aatgtcggtgccatgatctccaacatgaacaaaaaccgtgcagacttccaggctaagatc
gactccatcaagcaatacatgcagttccgtaaggtctccaaggatctggaggccagggtc
atcaagtggtttgactacctctggacggagaagaagacctgcgatgagaaggaggtgctg
aagaacctgccggacaagctgaaggccgagatcgccatcgacgtccatctggataccctg
aagaaagtgaaaatcttccaggaatgcgaggctgggctgcttattgagttggtgatgaag
ctgcagcctcaggtgttctccccaggagattacatctgtaagaagggagacatcggcaga
gagatgtacatcattaaggaagggaagctagctgtggttgcggaagacggggtgacacag
tggtgtgtgctcagcgacggagcgtacttcggagatatcagtatcctgggcatcaagggt
tccaaggctggcaacaggagaacggccaacatcaggagcgtgggttactctgacctcttc
gctctgtcgaaagatgatctcatggaggctctcaccgagtatcccgaagccaagaagatc
ctggaagagaagggaaaggctacgctgatgaaggacaacatgatcgatgaggaaatcgct
aatgcaggtgccgaccccaaggacatggaggagaagatcctcaggctggagagtaatatg
gaaatcatgacgtccaagttggccaagatcatggctgagttcacatccggccagggcaag
attaaacagaggatcaccgacatggagtcaacagtcaagtcggtccggcccgaggatata
tctgaggtggtggccgacaagtag
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integrated database retrieval system
