Oncorhynchus gorbuscha (pink salmon): 123996371
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Entry
123996371 CDS
T07892
Symbol
sox14
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor Sox-14
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
123996371 (sox14)
Transcription factors [BR:
ogo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
123996371 (sox14)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
PROL5-SMR
Motif
Other DBs
NCBI-GeneID:
123996371
NCBI-ProteinID:
XP_046155700
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Position
LG15:5762207..5764203
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AA seq
235 aa
AA seq
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MSKPVDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPYIDE
AKRLRAQHMKEHPDYKYRPRRKPKNLLKKDRYVFPLPYLGDTDHLKGLSASDSLLSASEK
VRAFMPPTSVPYSFLDPSQFTSSAIQKMTEMPHTMTTSSLGYGSLGYQNGAFGSLGCPSQ
HTHTHPSPTNPGYVVPCNCTAWSASSLQPPVAYILFPGMTKSGIDPYSSTHATAM
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcctgtagatcatatcaagaggccaatgaatgcgttcatggtctggtcccgc
ggccagaggaggaaaatggcacaagagaatcccaaaatgcataactcagaaatcagcaaa
agacttggcgcggagtggaagctgctctctgaatccgaaaagcgtccttacatcgacgaa
gcgaagaggctgcgagcacagcacatgaaagaacacccagactataaatacagacccagg
cgcaaacccaagaatctattgaagaaggacaggtatgtgttccctttgccttaccttggg
gacacggatcacttgaaaggactctcagcctcggactctctgttgagcgcatcagagaaa
gtcagggcattcatgcccccgacctcggtaccttactcgttcctcgacccgagccagttc
acctccagtgctatccagaaaatgacagagatgccccacaccatgaccaccagcagtttg
ggttacggctcgttgggataccagaacggcgcgttcggcagtttgggttgccccagccag
cacacccacacccacccgtcgcccacaaacccggggtacgtggttccctgtaactgtacc
gcctggtcggcgtcgagtttacagcccccggttgcctacatactttttccaggtatgacc
aagagtgggatagacccatattcatcaacacatgccactgctatgtaa
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