Oncorhynchus gorbuscha (pink salmon): 123996494
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Entry
123996494 CDS
T07892
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
123996494
04121 Ubiquitin system [BR:
ogo04121
]
123996494
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123996494
Membrane trafficking [BR:
ogo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
123996494
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123996494
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
Zn_ribbon_19
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
FAR1_N
zf-Nse
zf-RING_16
DUF8608
HypA
C1_2
DZR
RING_Ste5
DZR_2
Motif
Other DBs
NCBI-GeneID:
123996494
NCBI-ProteinID:
XP_046155820
LinkDB
All DBs
Position
LG15:complement(39075636..39080869)
Genome browser
AA seq
312 aa
AA seq
DB search
MAEAPPWPRQFFCHRCSEEISPRLPDYTCPRCESGFIEELLEERSSENGSTSTISSGDQN
QQSLENVDSSQMATFPSGYGQFALGVFDDSFDFGAGQGTEDNRDTENRREQELASRQRYG
ARQSRGRHDIRGQSGRHEGVPTLEGIIQQLVNGIIAPTAMPNIGVGPWGVLHSNPMDYAW
GANGLDAIITQLLNQFENTGPPPADRDKIKSLPTIPITQEHVVSGLECPVCKEDYSAGEN
VRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSLSGQNTAMNPPGLSGMNFAAASSPTPPSS
TSTNNENSANNC
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcacctccatggcccagacagtttttctgtcacagatgttcggaagagatc
agccctcgcctcccggattacacatgtccacgttgtgaatctggcttcatcgaggaactg
ctggaggaaagaagcagtgaaaatgggtccacatccaccatctccagcggtgatcagaac
caacagtcgttagagaatgtggactcttcacagatggctacattcccatcgggttacgga
caatttgctctgggtgtctttgacgactcctttgattttggagcggggcagggaacggag
gacaaccgcgacacagagaaccggcgggaacaggagttggcatcacggcagcgttacggc
gccaggcaatctcgcggtcgccatgacatccggggacagtcagggagacatgagggagtg
cccactctagagggaatcattcagcagctagtgaatggaataattgcccctacggcaatg
ccaaatattggtgtgggaccctggggcgtgctccactcaaaccccatggattatgcctgg
ggtgccaacggactagatgcaatcattacacagttattaaatcaatttgagaacactggc
cctccgccagctgacagggacaaaatcaagagccttcccacaatcccaatcacacaggag
catgttgtctcaggtctagaatgtccagtgtgtaaagaagactacagtgctggagaaaat
gttaggcaacttccatgtaatcatttgtttcataatgattgcataataccttggcttgaa
cagcacgacacatgtccagtgtgcaggaaaagcttgagtggacagaacaccgctatgaat
cctccaggtctatcagggatgaactttgctgcggcctcatcccctacacccccgtcctcc
acttcaaccaacaacgagaactcggccaacaactgctaa
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