Oncorhynchus gorbuscha (pink salmon): 123996500
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Entry
123996500 CDS
T07892
Name
(RefSeq) platelet-derived growth factor receptor alpha-like
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04010
MAPK signaling pathway
ogo04020
Calcium signaling pathway
ogo04144
Endocytosis
ogo04510
Focal adhesion
ogo04540
Gap junction
ogo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
123996500
04020 Calcium signaling pathway
123996500
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123996500
09144 Cellular community - eukaryotes
04510 Focal adhesion
123996500
04540 Gap junction
123996500
09142 Cell motility
04810 Regulation of actin cytoskeleton
123996500
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ogo01001
]
123996500
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ogo04090
]
123996500
Enzymes [BR:
ogo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
123996500
Protein kinases [BR:
ogo01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
123996500
CD molecules [BR:
ogo04090
]
Proteins
123996500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Ig_3
Pkinase
I-set
ig
Ig_2
VEGFR-1-like_Ig-like
VEGFR1-3_N_Ig-like
Kinase-like
Motif
Other DBs
NCBI-GeneID:
123996500
NCBI-ProteinID:
XP_046155829
LinkDB
All DBs
Position
LG15:complement(26308358..26338402)
Genome browser
AA seq
1467 aa
AA seq
DB search
MDEMKTCLIIGVFLFGLLSVTRGLATPTIVSTEDEFVLEPLSVFNISCTGKRNVAWVEPL
PDDTFVLPGYYTSTLFIYNASVTHTGYYSCKYQDKEGDEEVDGVANDAFIYVFVPDPEIP
FVPEEPDRMLVPVYPNRTIIPCRVSDPQSQVVLKSAPSGVEVDAVYKNKIGFIGNLDAGL
YICETTVNSMTITSDTYTVEANKQIENVHVEVKASEEAVRLGEPFNITCVAPPGLPNQQQ
WLHPRKQAVDAVQMKQTLPDRVVYTLSIPAATSQDGGVYECSITNNFSGEIRANRVAVTV
FEENTFVILDHSGIGVVEFVSMMEETEFTISIEAFPAPKVTWLKDGIAITENSYFLTKTS
RLEGNKHQSTLTLRQPLEEDSGNYTIMVLSIPHTAQFSFTLKVKASAPVLFQPASAPVLI
PQREEMVVPLHTPFTLTCRGEAELAWDTPVYLSEQTEEDNSGLFVTTVTVENATAANTGF
YTCFYNGGNSTEEGEDSSIYIYVPDPEVPFVPSLVPFGNHVLNGHDEMEIQCRVSDPSAN
VTLVNTDTQQAMPMTVYDSKRGAVGFFSAGTYVCKALVNGEEHLSEEYIVHGWAGGSELR
VELKALKTALLVGDTITVTCVARGSEILEDHWKYPGKLVNRGLKSVRENKRDQEIQYIMT
VPQASAKDSGIYACSITDIISNESQTKELAITVYESPFVSLRPVFSSQESADLDESREFR
ADIDSFPSAQVTWLKDGLPLNYVAAEITNSLQQLSETRYLSVLTLIRAKEEDSGNYTIRV
QNGNQTHSHSFSLQVKVPAVIVDLMDLHHGSASGQSVVCIAGGMPTPEVEWFICKNIKHC
ANDSSQWVPLPTNDTDITVEAHFDQDNQLESQVIFVRLENTLAVRCLARNEMAAVSREVK
LVSQGPHSELPVTAAVLVLLVIVIISLIVLVIIWKQKPRYEIRWRVIESVSPDGHEYIYV
DPMQLPYDSRWEFSRDGLVLGRVLGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARS
SEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPTYIITEYCFYGDLVNYLHKNRENFLS
LHSEKTKKDLDIFGINPADESSRSYVILSFESGKGDYMEMKQADTTQYVPMLEMSDASKY
SDIQRSEYDHPPSQKGDNEMDSLLSEDGNEGLSTTDLLSFTYQVARGMEFLSSKNCVHRD
LAARNVLLSQGKIVKICDFGLARDIMHDNNYVSKGSTFLPVKWMAPESIFDNMYTTLSDV
WSYGILLWEIFSLGGTPYPGMVVDSSFYNKIKSGYRMAKPEHAPADVYEMMIKCWNSEPE
KRPSFLSLSESVASLLPSGYKRCFERASHEFLKSDHPAVTRVQVESEDTYIGITYKSQDK
LKDRESGFDEQRLSSDSGYIIPLPDLDPLSDDEYVKRNRHSSQTSEESAIETGSSFTLAK
REGETLEDISLLDEMCLDSELVEDSFL
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaatgaagacatgtctcatcattggggttttcttgtttgggttgttatcagtt
acccgcgggctggccacaccgaccattgtatcaactgaagatgagtttgttcttgagccg
ctctcggtgttcaacatcagctgcactggtaaaaggaacgttgcctgggtcgagccccta
ccggacgacacattcgttttgcctggatattacacctccacgctcttcatctacaacgct
tctgtgacacacaccggatattactcctgcaaataccaagacaaagagggcgatgaagag
gtggatggcgtagccaatgatgcgttcatatacgttttcgtcccagatcctgagattcca
tttgtgcccgaggagccagatcgcatgctagtcccagtctatcccaatagaaccatcatc
ccatgcagggtgtcagaccctcaatcccaggtggtcctaaagagcgctcccagtggagta
gaggtggacgcagtttataagaacaagatcggcttcattggcaacctggacgctggattg
tacatctgtgagaccaccgtgaacagcatgacaattacgagtgacacttacaccgtggag
gccaacaaacagatagagaacgtccatgtggaggtgaaggccagcgaagaggcagtgaga
ctgggggaacccttcaacatcacctgtgtggcacctccaggactgcccaaccagcagcag
tggctccaccccaggaaacaggctgtggatgcagtccagatgaaacagactctgcctgat
agagtggtctacaccctcagtatcccagcagccacctctcaggacggtggggtgtatgag
tgctccatcaccaacaacttcagtggagagatcagagccaacagggtggctgtcactgtc
tttgaagagaacacctttgtgatattggaccacagtgggattggagtggtggagtttgtc
agtatgatggaggagacagagttcactatcagtattgaagccttccctgctcctaaagtc
acctggctgaaagatggcatcgccatcactgagaacagctacttcctcaccaagaccagc
cgtctggaggggaacaaacatcagagcactctgactcttcggcagccactagaggaggac
agtggtaactacaccatcatggtcctcagcatccctcacactgcccagttctccttcacc
ctcaaagtgaaagcctcagccccagtgctgttccagccagcctcagctccggtgctgatc
ccccagagagaggagatggttgttcccctccatacccccttcactctgacttgcaggggc
gaggccgagctggcctgggacacgcccgtctacctatcagagcagacagaggaggacaac
agcggcctgttcgtcaccacggttaccgtagagaacgccactgcggcaaacactggtttc
tacacctgcttctacaacggagggaactccactgaggagggagaggacagcagcatctac
atatatgtgccagatccagaggtgccttttgtcccctctctggtgccctttggcaaccac
gtcctgaatggtcatgatgagatggagattcagtgtcgcgtgtcagaccccagtgccaat
gtgactctggtcaacactgatacccagcaggccatgcccatgactgtctacgacagcaag
aggggcgccgtgggcttcttcagtgcaggaacctatgtctgcaaggccctcgtcaatgga
gaggagcacctcagtgaggagtacatcgtccacggctgggcaggggggtcagagctgcgt
gtggagctgaaggccctgaagactgctctcttggtgggagacaccatcactgtcacctgt
gtggcccgggggtctgagatactggaagaccactggaagtaccctggaaaactggtgaac
cgtggcttgaagtcggtgcgtgagaataagagggaccaggagatccagtacatcatgact
gtcccccaggcctcagccaaagacagcggcatctacgcctgctccatcactgacatcatc
agcaacgagagccagaccaaggagctggccatcactgtctatgagagcccatttgtgtcg
ctgcgccctgtgttcagttctcaggagtcagcagacctggatgagagcagagagttccgg
gccgacattgactcattccccagcgcccaggtcacatggctcaaagatggcctccccctc
aactatgtggcggctgagataaccaacagcctccagcagctcagcgagaccaggtacctg
agtgttctgaccctgatccgggccaaggaggaggacagtgggaactacaccatcagagtg
cagaacgggaaccagacccacagccacagcttcagcctgcaggtcaaagtacctgcagtc
attgtggacctgatggacctccaccatggctcagcctcaggccagtctgtagtgtgtatc
gctggaggcatgcccactcctgaggtggagtggttcatctgcaagaacataaaacactgc
gccaatgactcatctcagtgggtgcccctgccaacaaacgacacagatatcactgtggaa
gcacattttgatcaggacaaccagctggagagccaggtgatcttcgtgcgtcttgagaac
actctggccgtccgctgcctggccaggaacgagatggccgccgtcagcagggaggtgaag
ctggtgtcacaaggcccccactccgagctgcctgtaactgctgctgttttggtgctgctg
gtcattgtcatcatctcactcattgtcctggtcattatctggaaacagaagcctcgctat
gagatccgctggagggtgatagagtcagtgagccctgatggccatgagtacatctacgtt
gaccccatgcagctgccctatgactccagatgggagttctctcgcgatgggctcgtactg
ggtcgagttctgggctctggggcgtttgggaaggtggtggagggaactgcatatggactc
agccgctcccagcccgtcatgaaggtggctgtgaagatgctgaaacccacggcccgttcc
agtgagaaacaggccctgatgtcagagctgaagatcatgactcacctgggccctcacctc
aacatcgtcaacctgctgggggcctgcaccaagtcaggccccacctacatcatcactgag
tactgcttctatggagaccttgtcaactacctgcacaaaaacagagagaacttcctcagc
ttgcactcagagaagaccaagaaagacctggacatctttggcataaaccctgcagacgag
agcagcaggagctatgtgatcctgtcctttgaaagtggtaaaggggactacatggaaatg
aagcaggcagacaccacgcagtacgtgcccatgctggagatgagtgatgcctccaagtac
tccgacatccagaggtctgaatatgaccacccaccatcacagaagggtgataatgagatg
gacagcctgctgtcagaagacggcaacgagggcctcagcaccacagatctgctcagcttt
acctaccaggtggccagaggcatggagttcctgtcctctaagaactgtgtgcatcgggac
ctggctgctaggaacgtcctgctctctcaggggaagatagtgaagatctgtgactttggc
ctggccagagacatcatgcatgacaacaactatgtctccaaaggcagtaccttcctgcca
gtgaagtggatggctcctgagagtatctttgacaacatgtacacaaccctcagtgatgtc
tggtcctacggcatcctcctctgggagattttctctctaggtggcaccccatacccaggg
atggtagtggactccagcttctacaacaagatcaagagtggctacaggatggccaaacct
gagcacgcccccgctgatgtgtatgagatgatgataaagtgttggaacagtgagcctgaa
aagaggccttccttcctcagcctgagtgagagtgtggcttcactgctgccctccggctac
aagaggtgcttcgagagggcaagccatgagttcctgaagagcgaccatccagcagtgacc
agggtccaggtggagagtgaagacacctacattgggatcacctataagagtcaggacaag
ttgaaggacagggagagtggcttcgacgagcaacgcctcagctctgacagcggttacatt
atccccctccccgacctggaccctctgtctgatgatgagtacgtcaagaggaaccgccac
agctctcagacatctgaagagagtgccatagagacaggctccagcttcacgctggccaag
agagaaggagagaccctggaggacatcagcctgttggatgagatgtgtttggactcagag
ctggtggaagacagtttcctgtga
DBGET
integrated database retrieval system
