Oncorhynchus gorbuscha (pink salmon): 123996510
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Entry
123996510 CDS
T07892
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 homolog isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04810
Regulation of actin cytoskeleton
ogo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
123996510
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
123996510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
123996510
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
123996510
Factors involved in mRNA localization
Other mRNA localization factors
123996510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Motif
Other DBs
NCBI-GeneID:
123996510
NCBI-ProteinID:
XP_046155856
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All DBs
Position
LG15:1050443..1140033
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AA seq
1253 aa
AA seq
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MASTVTLEDALSNVDLLEELPLPDQQPCIEPLPCSLMYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRLAIDRFCGEVRRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMSEPSSIQESQNLSMFLANHNKITQSLQQQLEVINGHDELLAD
IVNLCVDYYENRMYLTPNEKHMLLKVMGFGLYLMDGSNSNIYKMDAKKRINLTKIDKFFK
QLQVVPLFGDMQIELSRYIKTSAHFEENKNRWSCTSTGSSPQYNICEQMVQIREDHMRFI
SELARYSNSEVVTGSGRQEAHKTDHEYRKLFDLSLQGMQLLSQWSAHVMEVYSWKLVHPT
DKYSNKECPDNAEEYERATRYNYTIEEKFSLVEVMAMIKGLQVLMGRMESVFNHAIRHTI
YSALQDFAQLTLRDPLRQAIKKKKNVVQSVLQAIRKTICDWEAGHEPHNDPALRGEKDPK
GGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTIMDMEKFHRESF
FYTHLLNFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM
MEYVLYPLDLYNDSAHYALTRFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKILAGS
LLLDKRLRADCKNQGANIPWPASNRYETLLKQRHVQLLGRSIDLNRLITQRVSAALYKSL
ELAINRFESEDLTSIVELEGLMNINRMTHKLLSKFLTLDSMDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKPPNAQPQYLYGSKALNLAYSS
IFGFYRHFVGPPHIKAMCRLLGYQGIAVVMEELLKVVKSLLQGTIIQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNALLFCLLSEQSLSQEEVC
DLLHAAPFQNILPRVHVKEGERLDAKMKRLEAKYTALHLVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILTRVRGFLDDPIWHGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGAHEFTVEQCFGDGLHWAGCMIISLLGQQRRFDILDFSYHLLKVQKHDGKDEIIKSVP
LKKMVDRIRKFQVLNDEIFAILNKYLKSGDGENMPVEHVRCFQPPIHQSLASN
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacggtgaccctggaggatgctctgtccaatgtggaccttctggaggagctg
cctctcccagaccagcagccctgcatcgagcccctgccctgctccctcatgtaccagccc
aacttcaacaccaactttgaggaccgtaatgcctttgtgacggggatcgccagatatatc
gagcaggccactgtccactctagcatgaatgagatgctggaggagggccaggagtatgct
gtgatgctgtacacgtggaggagctgctctcgcgctatcccacaggtgaagtgtaatgag
cagcccaacagagtggagatctatgagaagacagtggaggtgctggagcctgaggtcacc
aagctcatgaactttatgtacttccagcgattggctatagaccggttctgtggggaggtg
cgtcgtctctgccacgctgagaggaggaaggactttgtctccgaggcctacctcctgacc
ctggggaagttcatcaacatgttcgctgtgctggacgaactcaagaacatgaagtgtagc
gtcaagaacgaccactctgcctacaaacgagctgcccagttcctcaggaagatgtcagaa
ccctcatccatccaggagtctcagaacctctccatgtttctggccaaccacaacaagatc
actcagtctctgcagcagcagttggaggtgattaacggccacgatgagctgctggctgac
atagtcaacctgtgtgttgattactatgagaacaggatgtacctgacccccaacgagaaa
cacatgctgctcaaggtgatggggtttggtctgtacctgatggatggcagtaacagcaac
atctacaaaatggacgccaagaagaggatcaacctgacaaagattgacaagttcttcaag
caactgcaggtggtgcctctgtttggtgacatgcagattgagctgtccaggtacatcaag
accagcgcacactttgaagagaacaagaacaggtggtcatgtacctcaacaggcagcagt
cctcagtataatatctgtgagcagatggttcagatcagggaagaccacatgaggttcatc
tctgagctggctcgctacagtaacagtgaggtggtgacggggtccggtcgtcaggaggcc
cacaagacagaccatgagtacaggaagctgtttgacttgtctctgcaggggatgcagcta
ctgtcccagtggagcgcacacgtcatggaagtgtactcgtggaagctggtccatcctaca
gataagtactcgaacaaggagtgtcctgacaacgcggaggagtatgaacgagcaacacga
tacaactacaccatcgaggagaagttctccctggtagaggtgatggccatgataaagggt
ttacaggtcctgatgggtcgtatggagtctgtttttaaccacgctatccgccacaccatc
tactcggccctgcaggacttcgcccagctcaccctgagagacccgctacggcaggccatc
aagaagaagaagaacgtggtgcagagtgtcctgcaggccatcaggaagaccatctgtgat
tgggaggcaggacatgagccccacaatgaccctgccctgcgaggagagaaagaccccaag
ggaggctttgacatcaaggttcctcgccgcgccgtcggcccttccagcacacagctgtac
atggttcgtaccatgctggagtctctgatagctgataagagtggttctaagaagaccctc
cgcagcagtctggagggacccaccatcatggacatggagaagttccacagagagtccttc
ttctatactcacctgctcaacttcagcgagaccctacagcagtgctgtgacctgtctcag
ctgtggttcagagagttcttcctggagctgaccatggggcgcaggatccagttccccatc
gagatgtccatgccctggatcctcacagaccacattctggagaccaaggaggcctctatg
atggagtatgtgctgtatcctctggacctctataatgacagtgcccactacgccctgacc
aggttcaagaagcagttcctctacgatgagatagaagcagaggtcaacctgtgttttgat
cagtttgtctacaagctggctgatcagatatttgcctactacaagattctagctggaagt
ctgctgctggacaagcgtctgagagcggactgtaagaaccagggagccaacatcccctgg
cccgcgtccaaccgctacgagaccctgctgaaacaacgccacgttcagctgctgggtcgt
tccatagacctgaaccgtctgatcacccagagagtgtctgctgctctctacaagtctctg
gagctggccatcaaccgctttgagagcgaggacctcacatccatcgtggaactagaaggt
ctgatgaacatcaaccgtatgacccacaagctgctgtctaagttcctgacgctggacagt
atggacgccatgttccgggaggccaatcacaatgtctccgccccctacggacgcatcaca
ctccatgtcttctgggaactcaactacgatttcctcccaaactactgctacaacggatct
actaacaggttcgttcgcacggtcctgccgttctcacaggagttccagagggacaagcca
cccaacgcccagccccagtacctgtacgggtcaaaggctctgaacctggcgtacagcagt
atctttggtttctacagacactttgttggtcctcctcacatcaaggccatgtgtcgtcta
ctggggtaccagggcatcgctgtggtcatggaggaactgctcaaagtggtcaagagcctg
ctccagggcaccatcattcagtatgtgaagaccctgatggaggtgatgcctaagatctgc
cgtctccctcgccacgagtacggctcgccgggtatcctggagtttttccaccaccagctg
aaggacatagtggagtacgccgagttgaagacggtctgtttccagaacctcagagaagtc
ggcaatgctctcctcttctgtctgctcagcgaacagagcctgtcgcaggaggaagtttgt
gacctgcttcatgccgcaccgttccagaacattctgcccagggtccatgtcaaagagggt
gagcgtcttgatgccaagatgaaacgcctggaggctaagtacacagccctgcacctggtt
cctctgatagaacgcctgggaaccccacagcaaatagccatagctcgtgaaggtgacctg
ctgaccaaagagcgtctgtgctgtggcctgtccatgttcgaggtcatcctgactcgcgtc
cgcggtttcctggacgaccccatctggcacggcccgttgcccagcaacggcgtgatgcac
gtggacgagtgtgtggagtttcaccggctgtggagcgccatgcagtttgtttactgcatc
cctgtaggagcacacgagttcaccgtggagcagtgtttcggggacggtctccactgggct
gggtgtatgatcatctccctactgggtcaacagagacgctttgacatcctggacttcagc
tatcacctgctgaaggtgcagaaacacgatggaaaggatgagatcatcaagagtgtgcct
cttaaaaagatggtggacagaatccgcaagttccaggtcctcaacgatgagatctttgcc
atcctgaacaagtacctgaagtcgggcgatggcgagaacatgccagtggagcacgtccgg
tgtttccagcctcctatccaccaatccctggccagcaactga
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