Oncorhynchus gorbuscha (pink salmon): 123996518
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Entry
123996518 CDS
T07892
Name
(RefSeq) cysteine protease ATG4B-like isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04136
Autophagy - other
ogo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123996518
04136 Autophagy - other
123996518
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogo01002
]
123996518
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
123996518
03029 Mitochondrial biogenesis [BR:
ogo03029
]
123996518
Peptidases and inhibitors [BR:
ogo01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
123996518
Membrane trafficking [BR:
ogo04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
123996518
Mitochondrial biogenesis [BR:
ogo03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
123996518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
123996518
NCBI-ProteinID:
XP_046155877
LinkDB
All DBs
Position
LG02:complement(5235641..5258369)
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AA seq
431 aa
AA seq
DB search
MDAATLTYDTLGFGEFEDFPETSEPVWILGKEFNALTEKDDILSDVTSRLWFTYRKNFPP
IGGTGPTSDTGWGCMLRCGQMILGEALVCRHLGRDWRWVRGQPQRGQYISILNAFLDKKD
SYYSLHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLTVFDSWSRLAVHVAMDNTVVMEEIK
RLCMPWLDYGGAACAEPLGWMPKHNGCLEGACALAEEETALWKPLVLLIPLRLGLSDINK
AYIETLKQCFQLPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPCEDSQVPDD
TYHCQHPPCRMHICEIDPSVAVGFFCRTEDDFDDWCMRIRQLSHTRGSLPMFELVDCQPS
HFACSVDVLNLTPGEAGIQSEVRCGQAHCTTDKAPFKGNFPDVRGDRVHDFSDRSERFFD
SEDEEFEILSL
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagctactctcacgtacgacacacttggctttggagagtttgaagattttcca
gagacctcagagccagtgtggatcttggggaaagagttcaacgcactcacagaaaaggat
gacattctttcagatgtcacttcacgactatggttcacctacagaaaaaacttcccgccc
attggagggacagggccaacgtccgacacaggctggggctgcatgctgcgatgtggacag
atgatcctaggcgaggccctggtctgcaggcatctaggccgagactggagatgggtgaga
ggccagcctcagagaggacagtacatcagtatcctcaacgccttccttgacaagaaagac
agctactattctttacatcaaattgcccagatgggagtcggggaggggaagtctataggc
cagtggtacggaccgaacacagtggcacaggtactgaagaaactaactgtgtttgactcg
tggagtcgtctggcggtacatgttgctatggacaacaccgtggtgatggaggagatcaag
cggttgtgtatgccctggctggactatggtggagcagcgtgtgcagagcccctggggtgg
atgccaaagcataacggctgcctggagggggcctgtgccctggctgaggaggagacggct
ctctggaagcccctggtccttctcatccctctcaggctgggcctgagcgacatcaacaag
gcctacatcgagaccctgaagcaatgctttcagctgccccagtccctgggtgtcatcgga
gggaaacccaacagtgcccattacttcataggctatgttggagaggagttgatctacctg
gacccccacaccacccagcctgcagtagagccctgtgaggacagccaggtccccgacgac
acttaccactgtcagcatccgccgtgccgcatgcacatctgtgaaatagacccctccgtc
gcagtgggtttcttctgccgaacggaggacgacttcgatgactggtgtatgcgtatccga
cagttgtcccacactagaggaagcctgcccatgtttgagctggtagactgtcaaccatct
cacttcgcctgctctgtagacgtgctcaacctcactccgggtgaggctgggattcagtca
gaggtgcgttgtggacaagcgcattgcactaccgacaaagcgccttttaaaggcaatttc
cctgatgttcgcggagatcgcgttcacgatttctcagaccggtcggagcgcttctttgat
tctgaggatgaagagtttgagatcctgtccctgtga
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