Oncorhynchus gorbuscha (pink salmon): 123996562
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Entry
123996562 CDS
T07892
Symbol
rxrgb
Name
(RefSeq) retinoic acid receptor RXR-gamma-B isoform X1
KO
K08526
retinoid X receptor gamma
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03320
PPAR signaling pathway
ogo04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
123996562 (rxrgb)
03320 PPAR signaling pathway
123996562 (rxrgb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
123996562 (rxrgb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ogo03310
]
123996562 (rxrgb)
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
123996562 (rxrgb)
Nuclear receptors [BR:
ogo03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
123996562 (rxrgb)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
123996562
NCBI-ProteinID:
XP_046155950
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Position
LG15:complement(7299471..7388018)
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AA seq
461 aa
AA seq
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MWHPMASASSGSPIRELGYMHYSQGPMSMPHSHGPPMGGMVGHPSVISTSRTLPSPMSTL
GAPLNGLASPYSVITSSLGAPSTPGINFGSLHSPQMREMNSVSSSEDIKPPPGLLNLGDI
NYNCTSPGGMSKHVCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDSKECLID
KRQRNRCQYCRYQKCLAMGMKREGVSVQEERQRGRERGENEVESTSSFNEEMPVDKILDA
ELAVEPKTETSADEGPGNSTNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILL
RAGWNELLIASFSHRSVTVKDGILLATGLHVQRSSAHSAGVGSIFDRVLTELVSKMKDMQ
MDKTELGCLRAIVLFNPDAKGLSNSPEVEGLREKVYASLESYTKAKYPDQPGRFAKLLLR
LPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtggcaccctatggcatcagcctcatctggaagccccataagggagctgggttatatg
cactattcccaagggccgatgagcatgccccactcccatggccctccaatgggtggcatg
gtggggcacccctccgtcatcagcacctccaggacccttccttccccaatgagcaccctg
ggcgcgcccctgaacggcctggcgtcgccttactccgtcatcacgtcctccctgggcgca
ccctccacgccagggatcaacttcggatcgctccacagtccacagatgagagagatgaac
agtgtcagtagttcggaggacatcaagcctcccccgggtctcctgaatctaggggacatc
aactacaactgcaccagccctggaggcatgtccaaacacgtatgtgccatctgtggagac
cgatcatcagggaagcactatggcgtgtacagctgtgaaggctgcaaaggcttcttcaag
agaaccatccggaaagatctcacctatacctgtcgagacagcaaggagtgcctgatagac
aaacgacagcgcaaccgctgtcaatactgtcgctaccagaagtgcctagccatgggcatg
aagagagaaggtgtgtcggtgcaggaggagaggcagcgtggaagggagcgaggggagaac
gaggtggagtccaccagtagttttaatgaggagatgcccgtcgataagattctggacgca
gagctcgccgtggaacccaagacagagacatcagcagacgaaggccctggcaactcgaca
aacgacccagtcaccaacatctgccaggcagcagacaaacagctgttcaccctggtggag
tgggccaagaggattcctcacttctcagagctgcccttagacgaccaggttattctacta
cgagctggctggaacgagctcctcatcgcgtccttctcacaccgctctgtcacggtgaaa
gacggaatcctattggccacgggtctccacgtccagagaagtagtgctcacagtgccgga
gtgggctccatctttgacagagtcctgacagagttggtgtctaagatgaaagacatgcag
atggacaagacagagctgggctgcctacgagccatcgtcctcttcaacccagatgcaaaa
ggcctgtcaaattcaccagaggtggaagggctgagggagaaggtctacgcctcgctggag
tcctacaccaaagccaagtacccagaccaacccggcaggtttgctaaactgttgctgcgt
ctccccgccctgcgctccataggcctcaagtgtctggagcacctgtttttcttcaagctg
ataggagacacgcccatagacacctttctcatggagatgctcgaggcgccacaccaaatc
acatga
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