Oncorhynchus gorbuscha (pink salmon): 123996622
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Entry
123996622 CDS
T07892
Name
(RefSeq) rho guanine nucleotide exchange factor 18-like isoform X1
KO
K21066
A-kinase anchor protein 18
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
123996622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
123996622
Membrane trafficking [BR:
ogo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
123996622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
PH_13
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
123996622
NCBI-ProteinID:
XP_046156088
LinkDB
All DBs
Position
LG15:7886612..8001002
Genome browser
AA seq
1533 aa
AA seq
DB search
MADSPLNNSWPSFSKLWMKRWSFKRGSEGKPCSTLPPCVSASEASSLSSSPASVAKDVFF
NTEEKDDESDYENPSLDEDVDSSVEDLLGLSCSFIDSNYYKDHQGVHSVSAAPETSPSTL
GFPSRYRDSPQHSSQLHPNPHPYPYPYQETENKSIPHHTIVVTQFNPNLLQSGSAMDGYN
SESVDPVGVVTTMVNLNGPGGQGDMMDSDRESFPILIRSMSTSRRHSLGMPMSPIDLGRR
LSLDAVDSDGERDDSLLRPSHLQAFIYPECPEQEVEESDGTDLSRSEAKETETEECSRSG
RTYSRTEILATDEHIHVAHVSHVVETSKRAAGEELDPEEPNLHTAEGQTHMLMIQKVLQE
LKQYHGARQRTTKPEGKETGSSVTWYEFLSNENEEEEERTEKVEKGTKVKRTLSSLRSRM
TGSFNKDKQDCAVNVHRSCRTLLAECNSSKNKKDSLHRTPTTVSPNLALRDRDQSSSALD
CPSGSPRIPGMTLTPRGPSVQPALAAFNSSSSSHTAAASLNHSHNSHTGSLSGDMDEPDS
LRSGLKRFNEDTVSLAPSTTDSIVVEDAYYSAFRADLESDAQDLEVESWSLAVDQHYLKK
YTKETVKRQDVIYELMQTEMHHVRTLKIMLRVYMRELKEHLQMDELFPRLESLLELHTSF
LSRLKERRRDSTQPGSDRNYNIQRLADILTTQFSGEKGDRMKENYGDFCSHHTEAVSYYK
EQLHNNKKFQNLIRKVNNLSVVRRLGVTECILLVTQRITKYPVLVERIVQNTEVGTEEHE
ELTRSLSLIKDCIVQVDAMVNLHEKASRLRDIAHKIEPKSLGRIKDGRVFHREDLSQGRR
RLLHEGTANHKAASGRLKDIVAVLLSDVLLLLQDKDQRYVFSTVDNKPSVISLQKLIVRE
VAHEERAMFLICASSNEPEMYEIHTASKEERNSWMTHIRQAVESCPHTEERLFSEQEEAR
AARFNEFQERLSQKDSQIVTLLTEKLQLFSDMCLVSGHEDTTFRSRLMLRGDASDLHQGE
TLLKGTITDVESLQNLLLSGVREPVSRLEEGSGSGALPRRADTFGGYDSRPIILNKSIVK
KKNHSGGDRARDETQKGCSDPQLTKIQASQTLEQPQADDDEEEEEASPATWSPIWSNTFP
EAEFFDRVLMLSQRLYSLQAIIAKQDSHIELQRASLTERASFPGRHRGNVLLEQEKQRTL
ALQREELASFHKLQSQHRQEQARWERERERHRLQAEVTEGTLRQREDDCRRLEEKLAEER
EDLERQRETYQQDLERLRESTRTVEKEKERLEQQRKIKRKTIEVMPFSGSLNGDLLLGMG
SSCSVGSDLTLPQKALVRSSPSVTPADYLERPEVLARGQSANATALPVKKEVPLHLCSTT
NQQHKQVGVQQQIPTKLAALSSKSSKSAKATHRTDSTASLDMKQMLPMKLSAKEDGTLKA
KRSISPNQQLPHTLVHSQSVHLTVSSSLPDRGPENQPAGLQKPPSQASNPLHIHTQPQAP
NPLHTQSPNAPPAQAPVHSLPPPCRTPEDVIFF
NT seq
4602 nt
NT seq
+upstream
nt +downstream
nt
atggcagattctcccttaaacaactcctggccttctttctccaaactctggatgaaacgt
tggtccttcaagagaggatcagaaggtaagccatgttctaccctgccaccctgtgtgagt
gcctcagaggcatcctccttgtcctcgtccccagcctccgtcgctaaggacgtcttcttc
aacactgaggaaaaggatgatgaaagtgactatgagaacccaagcctggatgaggatgta
gacagcagtgtggaggatctgctgggtttaagctgctccttcatagactcaaactattac
aaagaccatcaaggggtacactctgtatcggctgccccagaaaccagcccttctaccctg
ggctttcccagtagatatagagacagtccccagcacagctcccagctccatcccaatcca
catccctatccatatccctatcaagagactgaaaacaaatccataccccatcacactatt
gtggtcacccagttcaaccctaacctgttgcagtcaggcagtgccatggacggctataac
agtgagtcggtggaccctgtgggtgtggtgaccactatggtgaatctgaatggaccagga
ggacaaggagacatgatggattctgacagagagagcttccctatcctgatcaggtccatg
tctacatcacgcagacacagcttgggcatgcctatgtctcccatcgacttggggaggagg
ctgagcctggacgccgtagacagcgatggagagagggatgactctctcctccgcccctcc
cacctacaggcctttatatacccagaatgccctgagcaggaagtggaggagtcagatggg
acagacctctccagatccgaagccaaggagacagaaacggaggagtgcagtcggtctgga
aggacatactccagaacagagattctggccacagatgagcacattcacgtcgcacacgtg
tctcacgtagtggagacatcgaagagggcagcaggagaggagctggacccagaggaaccc
aacttgcacactgcagaaggacagactcatatgctgatgatacaaaaagttctgcaagag
ctcaagcagtaccacggagccaggcagaggaccacaaagccagaggggaaggagactgga
agtagtgtcacctggtatgaatttctctccaacgaaaatgaggaagaagaggaacgaaca
gagaaagtagaaaaggggaccaaagtgaagcgcaccctgagctcgcttaggagcagaatg
actggctcattcaacaaagacaagcaggactgtgcagtgaacgttcacaggagttgtcgg
acgctactagctgagtgtaacagcagcaagaacaagaaggattctctgcataggactccc
acaacagtgtcgccgaacctcgccctgagggatcgggaccagtcttcttcggcccttgat
tgcccctccggttctccgcgcatcccaggcatgaccctcaccccgcggggacccagtgtt
cagcctgccttagccgccttcaacagctcttcctccagccacactgctgcagccagcctc
aaccacagccacaacagccacaccggatccctctcaggggacatggacgaaccggacagc
ctacgctccgggctcaagcgcttcaatgaagacacagtctccctggccccatccaccact
gactccatcgttgtagaagatgcgtactactctgcatttcgagctgatctggagtctgat
gcccaggacctggaggtggagtcatggagtctggctgtggaccagcactacctgaagaaa
tacaccaaggagacggtcaagagacaagacgttatctacgagctgatgcagacagagatg
caccacgtacggaccctgaagatcatgctgcgtgtttacatgagggagctgaaggaacac
ctccagatggacgagttgttcccgcgcctggagagcctgctggagctgcacacaagcttc
ctgtcccgcctaaaagagcggcgccgagactccacgcagcccggcagcgacaggaactac
aacatacagagactcgctgacatcctcaccacacagttttcaggtgagaaaggggatcgg
atgaaggagaactatggtgatttctgcagccaccacaccgaggctgtcagctactacaag
gagcaactacacaacaacaagaagttccagaacctcatacggaaagtcaataatttgtcc
gttgtgagaagattaggagtgactgagtgtatcctcctggtgacacaacgcatcaccaag
taccctgtgctggtggaacgtattgtgcagaatactgaagtgggtacagaggaacacgag
gagttgaccaggtctcttagtctgattaaagactgtatcgtccaggtggatgccatggtc
aacctgcatgagaaggcctcgcgactccgagacatcgcccacaagatagagcccaagtcc
ctcggcaggatcaaagatggccgtgtgttccacagagaggacctgtcccagggtcgacgc
aggctgctgcacgaggggacggccaaccacaaggccgcctccggcagactcaaagatatt
gtggctgtgctgctgtccgacgtgcttttgttactccaggacaaggaccagagatatgtt
ttctccacagtggacaacaagccctcagtgatctccctccagaagttgatagtaagggag
gtggcccacgaggagagggccatgttcctgatctgcgcctcctccaatgagccggagatg
tacgagatccacaccgcctccaaggaggagcgcaactcctggatgacacacatccggcag
gccgtggagagttgtccacacactgaggagagactcttcagtgagcaggaggaggctcga
gccgccagattcaacgagttccaagagcgtctgagccagaaggactcccagatcgtgacg
ttgctgacagagaagctgcagctgttttcagacatgtgtctggtgtctggtcacgaggac
acgaccttccgctcccgcctaatgctgcgaggtgacgcctcagacctccaccagggggag
acactgctcaaggggaccatcactgatgtggagagtcttcagaacctgttgctgtctggt
gtgagagagccagtttcacgtctagaggagggttcaggatccggggctctgcccaggaga
gcagacaccttcgggggctatgacagcaggcccatcatcctcaacaagagcattgtgaag
aagaagaaccacagtggaggggacagggccagagacgagacccagaaaggctgctctgac
ccccagcttacgaagatccaggctagtcagaccttggagcagccacaggctgatgatgat
gaggaggaggaagaggcctctccagccacctggagccccatctggtctaacaccttccct
gaggccgagttctttgaccgggtgctgatgctgtcccagagactctacagcctgcaggcc
atcatcgccaagcaggacagccacatcgaactacaacgcgcctccctcaccgagcgcgcc
tccttccctggccgtcaccgcggcaacgttctcctggagcaggagaaacagaggacgctg
gccctgcagagggaggagctggccagcttccacaagctgcagtcacagcaccgtcaggag
caggctcgctgggagagggagcgggagcgccacaggctgcaggccgaggtcacggaaggg
acgctgaggcagagagaggacgactgcaggaggctggaggaaaagctggcggaagagagg
gaggatctggagagacagagagagacgtaccaacaggatctggagagactgagggagtcg
acccgcacagtggagaaggagaaggaacgcctggagcagcagaggaagatcaagaggaag
accattgaggtgatgcccttctctggcagtctaaatggggatctccttctgggcatgggc
agtagctgcagcgtcggatcagacctcaccctcccccagaaggccctggttcgttccagc
ccttctgtgacgcccgcagactacctggagcgtcctgaggttctggctcggggtcagagc
gccaacgccacggcgctgccggtgaagaaggaggtgcccctccacctgtgcagcaccacc
aaccagcagcacaagcaggtgggtgtccagcagcagatccccaccaagctggcagccctg
agctcaaagagttcgaagagtgccaaggccacccaccgcaccgacagcacagcctctctg
gatatgaagcaaatgctgcctatgaagttgtcagccaaagaggacggcactctgaaagcc
aagcggtccatcagccctaaccagcagcttcctcacaccctagtccactcccagtccgtg
cacttgacagtttcatcgagccttccagacagggggccagagaatcagcccgccggccta
cagaagccccccagccaggcctccaaccccctgcacatccacacccagccacaggctcct
aaccccctccatacccagagccctaacgcccctccagcacaggcccctgtccacagcctg
ccccctccatgcaggacccctgaggatgtaatcttcttctga
DBGET
integrated database retrieval system
