Oncorhynchus gorbuscha (pink salmon): 123996650
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Entry
123996650 CDS
T07892
Symbol
atg4c
Name
(RefSeq) cysteine protease ATG4C
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04136
Autophagy - other
ogo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123996650 (atg4c)
04136 Autophagy - other
123996650 (atg4c)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogo01002
]
123996650 (atg4c)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
123996650 (atg4c)
03029 Mitochondrial biogenesis [BR:
ogo03029
]
123996650 (atg4c)
Peptidases and inhibitors [BR:
ogo01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
123996650 (atg4c)
Membrane trafficking [BR:
ogo04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
123996650 (atg4c)
Mitochondrial biogenesis [BR:
ogo03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
123996650 (atg4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
123996650
NCBI-ProteinID:
XP_046156166
LinkDB
All DBs
Position
LG15:14715343..14725826
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AA seq
466 aa
AA seq
DB search
MENKGTDEVEKLKTKFLSAWHNVKYSWALKSKTYFSRNSPVFLLGKCYHFKADDEDSPTE
SCSTEVCDAPPATGGDNVEAFRRDFASRVWLTYREEFPALPGSSLTSDCGWGCMLRAGQM
MLAQALILHFLGRDWMWSEALALQPLDTETWTTSAAKRLVASLEASLQGERPSGPGPMLH
APGAPGRVEEADIHQREVYHRTLVSWLGDSPQAQLGVHRLVELGLVSGKRAGDWYGPAVV
AHILRKAVEEATDPGLSGITAYVSQDCTVYSADVIDSHQSCVAGGADALPFTDSRAVIIF
IPVRLGGEKTNPEYFSFVKSILSLEYCIGIIGGKPKQACYFVGFQDDSLIYMDPHYCQSF
VDVSTNHFPLQSYHCPSPKKMPFSKMDPSCTIGFYSRSVQDYQTISHELSKVLLPSANEK
YPAFTFMQGHGRDYNLSAELTPEKREWPFIRDPQRAAATAGDFVLL
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggagaataaagggactgatgaggtggagaaattgaagacaaagttcttgtcagcatgg
cacaatgtgaagtacagttgggctttgaagtcaaaaacctactttagcagaaattcccca
gtgttcctcctggggaaatgctaccattttaaggctgacgatgaggatagcccaacagag
agctgcagcactgaggtctgtgatgcaccccccgccacagggggtgacaacgtggaggct
ttccggagggactttgcgtcccgtgtgtggttgacctacagagaggagtttcctgccctg
ccaggctcctccctaacctctgactgtggctggggctgtatgctaagggcgggacaaatg
atgctggctcaggccctcatactacacttcctgggcagagactggatgtggtcggaggcg
ttggccctccagcctctggacacagagacctggaccaccagtgcagccaagcgtcttgtg
gccagcctggaggcctcactgcagggagagaggccctcgggcccaggaccaatgcttcat
gctccaggggcccctggaagagtggaggaggctgacatccaccagagggaggtctaccac
cgtaccctggtgtcctggcttggggacagccctcaggcacagctgggtgtccacagactg
gtggagttaggcctggtgtctgggaaacgggcaggggactggtatggccctgcagtggtg
gcacacatcctgagaaaagctgtagaggaggcaacagaccctgggctgtcgggcataact
gcttatgtctcccaggactgtacagtttacagtgctgatgtcatcgatagccaccagtcg
tgtgtggctgggggagcagatgccctgccctttactgacagccgggcggtcatcatcttt
atcccagtccgactggggggagagaagaccaacccagagtacttcagctttgtcaagagc
atattgagtctggagtactgtattggtatcatcgggggcaagcccaaacaggcctgctac
ttcgtgggctttcaagatgacagcttgatttacatggaccctcattactgtcagtctttt
gtggatgtcagcactaaccatttccctcttcagtcgtatcattgcccgtcgccaaagaag
atgcctttcagtaagatggaccccagttgtaccataggcttttactctagaagtgtccag
gactaccagacaatcagccacgaactgtccaaggtgttgctgccatcagcgaatgagaaa
tacccagcattcactttcatgcaaggtcacggaagagattacaacctttcggcggagttg
accccggagaagagggaatggccgtttatccgtgacccacagagagcagccgctaccgct
ggagacttcgtgctgctctga
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