Oncorhynchus gorbuscha (pink salmon): 123996671
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Entry
123996671 CDS
T07892
Symbol
syde2
Name
(RefSeq) rho GTPase-activating protein SYDE2 isoform X1
KO
K20655
Rho GTPase-activating protein SYDE
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
123996671 (syde2)
Membrane trafficking [BR:
ogo04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
123996671 (syde2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
C2
Motif
Other DBs
NCBI-GeneID:
123996671
NCBI-ProteinID:
XP_046156202
LinkDB
All DBs
Position
LG15:17430258..17526437
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AA seq
1807 aa
AA seq
DB search
MADPLRRNLLAKLRGKKSKKGTPAGGYGAATNGGRAGKGKVSQNPDGQTRPVVMFAELHH
LTDNIMRGNDSCVNDIVVNKVGLDQEQSTVGVVETSEFPQQYEASANMHINTSRGLGDNQ
GSGCSGIRGRVNEELLGVSLQRATQYEGNDREEMIRIHKQGPGYFSGQLQQGHIGRALEQ
RKHFVPIPRQYSAGDSIGFGSNSPNNHIIYHRRPDGVVKMTNGHYPSSKSNGTNVCFDKD
LKTRVSHGQTDDSCHQTVYNYKADNGQRSINDFKVTANVHPGHNQILKTNVTNNGTQMCP
PGIACAHHPDSNYTEENIVIRNIESYGSSHEFTRDNIRVTHLQSPTFFPTELEICDVNVA
SHFICAREGALRPYSLDSEDDDYYDNVFLPFYVSESLGPNDRKSSDKIEAIDSGKDVPKG
QVISDSVQETDRLQSQLKEAYYLLINTMHDISFDGPVSVNGFIDQASSSSHSRDSMCSRL
SIKHVDSDAWSSGEHSVQQVSDTDSILLFLLSENPGDPSLKKNVISKSLVNLSASRIGPP
LLRSTSDRAIKYRSGAHNAPCIQALGSQSPACENGDEASRLQAVGASDPFEKQASYNGNT
SSDDLLQDTGEDFKLNESSGSVNSLTGSSDNADTQQGGNSKRDGEMSAWDRGGSAKPHGV
TVNKMQEWMHKGRLLSSEMKQRIAGSTPQPHGTHGGLDSAPRPSQGQASSVPGGAKPAAP
TTRVHGAIPATVVPCQSQALHQSALIENVHSSDRHEVGEGKASELSLWRPPLNTITVSKK
RNWLQQSSGRPHHTTQDDSQCILGAEEDNGHGHTPRPPPSPSPEYLKPPGPPPSRPLRLH
LPQVSMCHARVGPQPRCVDPAEENDADDEGEIWYNPIPEDEEPELPHIYRPTAIPQVRLV
VPTRPQEPQAPQIQRRPSREGVAGRTLEGCSPDLEGVGESLGGGGGGGEGSQQGNAVHSM
EPSVQLHRQMLHTCKPQEEGPASSSRATAAAEGPDLATPGFSPPSSPNPAKKGSSLNWSF
PDKIKSPRTVRKLSMKMKKLPELSRKLSVKGIPSNNNNTSGNGASASSQSETRTQCPKTN
SGSEPGSAPPRLSPGGGQGAAASRNVISRYHLDSSVSTQQSYSKKKSSGTSMSASKGGYL
SDGDSPELVAKSGKHGSSEGKGGKGKEKDPATGGGERTGAGGVTGGGGSSKLHGTELDID
AFRHYDFTEQPKCTQYISGLMSLHFYGAEDLKPPRVDSRDVYCAIQVDSVNKARTALLTC
RTTFLDMDHTFNIELENAQHLKLVVFSWDPTPKKNRVCCHGTVVLPALFRVTRSHQLAVK
LEPRGLIYVKLNLMEQWQNSLDGGYDGDRERQMFGVEAWRVVERENSGLMVPLLIEKCIT
EIEKRGCQVVGLYRLCGSAAVKKELREAFERDSLGVELCENTYPDINVITGVLKDYLREL
PYPLITKHLYEAVLDSMAKRPLRIGAGGCENDQADTEQTVSLLENLPEVERLTLRRLLDH
LKLVASHHDVNKMTCQNLAVCFGPVLLSQRQEASCHSNRVFIDSEELASALHFKKHIEVL
HYLLQLWPVVDPHGKTSSPILEHPGPADQPAAPPLRRRKERPQVLNLSDAEMAGVLRPRP
GRLDSPSNRYAGDWSRCGERYLPPPLAQEENDYDDVPSEDMEVTEEGQEGEDRGKEGGEE
LRPEGLLDSGQEEGQAEPPTAKQEPPLLQEVMEGPVEKEEEEREAEEESDVSSDGQPSDD
RVCDDEDERILPLHNPKEHTYQAYMKIQDISPVLSNRVNLRDLQESIDTLIGNLERELNK
NNLKVSY
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcctctgaggaggaatttattagcaaaacttcgggggaagaaatctaagaaa
gggacgccggctggtggatacggtgctgcgactaatgggggcagagcaggtaaaggaaaa
gtttctcaaaacccagacggccaaactcgtccagtagtaatgttcgcagagttgcatcat
ctgacagacaacatcatgagaggtaacgatagttgcgttaacgacattgtagtaaacaag
gttggattagatcaagagcagagcacggtaggagttgttgagacgagtgagtttccccag
cagtacgaggcttcagctaacatgcacataaacactagccgggggctgggggacaatcag
ggtagcgggtgctccgggattaggggtcgagtaaatgaggaactcttgggggtctcactt
caaagagcaactcagtacgaggggaacgatagagaggagatgatcagaatccataaacaa
gggcccggctacttctctggacaattacaacaaggacacataggtagagcgctcgaacag
agaaaacactttgtccctattccgcgacagtatagcgcaggggattcaatagggtttggg
agcaatagtcctaataatcacattatataccacagaaggcctgatggggtagttaaaatg
acaaatggccactatccttcttcaaagagtaatggaacaaatgtctgctttgacaaagat
ctaaagactcgagtaagccacgggcagacagacgactcctgccatcaaactgtgtacaac
tacaaggcagacaacgggcagaggtctataaatgatttcaaagttacggcaaacgtgcat
cctggccacaaccaaatattgaaaacaaatgttacaaataacgggacgcaaatgtgtccg
ccgggtatcgcgtgtgcgcatcatccggacagtaattacaccgaggaaaacattgtgatt
agaaacatagagagttacgggagctcgcatgaatttacaagggacaacattagggtgacc
catttgcagagcccgacatttttccccactgaattggagatatgcgacgttaacgtggcc
tcccacttcatatgcgcaagagaaggagcactccgaccctactctctagatagcgaggat
gatgattattatgataatgtatttcttcccttttatgtatctgagtcattaggtccaaat
gatagaaaaagctcagataaaatagaagccatagattcgggaaaagatgttcctaaagga
caagtcattagcgacagtgtgcaggagacagacagactgcagagccagttgaaagaggcc
tattaccttcttataaacaccatgcatgatattagttttgatggtccggtcagtgtcaac
ggttttatagatcaggcaagttcctccagtcactctcgggacagcatgtgctcacggttg
tccatcaagcacgtggacagtgatgcttggtcgtcgggagagcacagtgtccaacaggtg
tcggacacagactccatcctgttgttcctgctgagtgaaaacccaggggatccaagtcta
aaaaaaaatgtcattagcaagagcctcgtgaatctatctgctagcaggattgggcctccc
ttactgcgttccactagtgacagagctatcaaataccgcagtggcgcgcacaatgcgccc
tgcatccaggccctcggttcccaaagccctgcctgtgagaatggggatgaagcaagtagg
ctacaggctgttggtgcctctgacccgtttgagaaacaggccagctacaatggtaacacg
agcagcgacgacctgcttcaagacaccggtgaagacttcaagttgaacgagagtagtggc
tcggtcaacagcctcactggatcgtccgacaacgcagacacccagcagggtggtaacagc
aagcgagatggagagatgagcgcatgggaccggggaggctctgccaagccccatggagtc
accgtcaacaagatgcaggagtggatgcacaaaggccgtctgttgtcttcagagatgaag
cagcgcatcgcggggtccacgccccaaccccatggcacccacggtggcctggatagtgca
ccacggcccagccagggccaggccagctcagttccaggtggagctaaaccagcagccccg
acgaccagagttcacggggccatacccgccactgtggtcccatgccagagccaggctttg
catcagtcagctctgatagagaatgtccactcctccgacaggcacgaggttggcgagggc
aaggccagcgagctgtcattatggagacccccactcaacaccatcaccgtttccaagaaa
cgcaactggctccagcagagctctgggaggccgcatcacaccacccaggatgactcccag
tgcattctgggagcagaggaggacaatggacatggacatacaccccgaccccctcctagc
ccctccccggagtacctaaaaccccccggaccgccgccctcccggcccctccgcctgcac
ctaccccaggtgagcatgtgccacgcccgcgttggaccccagcccaggtgtgtggacccg
gccgaggagaatgatgcggatgacgagggggagatctggtacaaccccatccccgaggat
gaagaacccgagctacctcacatttacagacccactgccatcccccaggtcagactggtg
gtccctacacggccccaggagccccaagccccccagatccagaggaggcccagccgggaa
ggggtggccgggcggaccctggaaggctgcagccctgacctggagggtgtgggggagagc
ctgggtggcggaggtggaggtggagaggggagtcagcaggggaatgctgtacattccatg
gagccgtcggtacagctgcacagacagatgctgcacacatgcaaacctcaggaggagggg
ccagccagttccagcagagccacagctgcagcagaaggccctgacctggccacccccggc
ttttcgcctccctccagccccaaccctgctaagaagggaagctccctcaactggtcattc
ccggacaagatcaagtccccgcgcaccgtcaggaaactctccatgaagatgaagaagctt
ccggaactcagccgcaagctcagcgtcaaagggatccctagcaacaacaacaacaccagc
ggtaacggagccagcgcgagcagccaatcagagacaaggacccagtgtcccaaaaccaat
agtgggtcagaaccaggctccgctcctcccaggttgtccccagggggcgggcagggggcg
gccgccagccgtaatgtgatctcgagatatcacttggacagcagtgtgtcgacacagcaa
agttacagcaagaagaagagcagcgggacctccatgtcggctagcaaggggggctacctc
agtgacggggactccccagaactggtggccaagtctgggaagcacgggtcctcagagggc
aagggaggcaaggggaaggagaaagacccagccactggaggaggagagagaacaggagca
ggaggagtaacaggaggaggtggcagctccaagttgcacggcacagaactagacattgac
gcgttccgccactatgacttcacagaacagcccaagtgcacccagtacatctcaggcctg
atgagcctgcacttctacggcgccgaggacctcaagccgccacgtgtcgactccagggac
gtctactgtgccatccaggtggactcggtcaacaaggcacgcactgccctgctcacctgt
cggaccaccttcctagacatggaccacaccttcaacatcgagctggagaacgcccagcac
ctgaagctagtggtgttcagctgggaccccacacccaagaagaaccgggtgtgctgtcat
ggcactgtggtgctaccggctctcttcagggtgaccaggagtcatcagctggccgtgaag
ctggagccacgaggcctgatctacgtgaagttgaacctgatggagcagtggcagaactcc
ctggacggaggctacgatggggaccgggagcgacagatgtttggggtggaggcctggagg
gttgtggagagagagaactcaggactcatggtgcccctgctcatcgaaaagtgcatcacg
gaaattgagaagagaggctgccaggttgtgggcctctaccgtctgtgtggttcagcggca
gtaaagaaggagcttcgggaggcctttgaaagggacagcctgggtgtggagctctgtgaa
aacacctaccctgacatcaacgtcatcacaggtgtgctgaaggactacctgcgtgagttg
ccgtaccccctcatcactaagcacctgtatgaggctgtgttagactccatggctaagagg
cctctgcgtattggagcaggaggatgtgagaacgaccaggcggacacagagcagactgtc
agcctgctggagaacctgccagaggtggagaggttgaccctgcggaggctgctggaccac
ctgaagctggtggcgtcgcaccacgacgtcaacaagatgacgtgtcagaacctggcagtg
tgcttcggtcccgtgctgctcagccaacgccaggaggccagctgccatagcaaccgcgtc
ttcatcgactcagaagagctggccagtgccctgcactttaagaagcacatcgaggtgctg
cactaccttctgcagctatggccagtggtggatccacatggaaagacctcatcccccatc
ctggagcaccccgggccagccgaccagcctgccgctccacccctgcgtcggaggaaggag
cgtccccaggtgctgaacttgagtgatgcagagatggccggggtgctgcgacctaggccg
ggccgactggacagccctagcaaccgttacgccggtgactggagtcgctgtggagagcgc
tacctcccccctcctctggcccaggaggaaaatgactatgatgatgttccttctgaggat
atggaggtcactgaggagggacaggaaggagaggacagggggaaggaagggggagaggag
ctaagaccggaaggattactggacagtggacaggaggaaggacaggcagagccacctaca
gcaaaacaggaacccccactactccaggaggtgatggagggacctgtcgagaaggaggaa
gaggagagagaagcagaggaggagagcgatgtctccagtgacggtcagccatcagacgat
agggtgtgtgatgatgaggatgagcgcatcctgcccctccacaaccccaaagagcacaca
taccaggcttacatgaagatccaggacatcagccctgttctcagcaacagggtcaacctg
cgagacctgcaggagagcatcgacacgctcataggcaacctggagagagagctcaacaag
aacaatctcaaagttagctactaa
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integrated database retrieval system
