KEGG   Oncorhynchus gorbuscha (pink salmon): 123996689
Entry
123996689         CDS       T07892                                 
Name
(RefSeq) protein mago nashi homolog
  KO
K12877  protein mago nashi
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03013  Nucleocytoplasmic transport
ogo03015  mRNA surveillance pathway
ogo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123996689
  09122 Translation
   03013 Nucleocytoplasmic transport
    123996689
   03015 mRNA surveillance pathway
    123996689
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ogo03019]
    123996689
   03041 Spliceosome [BR:ogo03041]
    123996689
Messenger RNA biogenesis [BR:ogo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     123996689
Spliceosome [BR:ogo03041]
 Complex C
  Other components
   EJC/TREX
    123996689
SSDB
Motif
Pfam: Mago_nashi
Other DBs
NCBI-GeneID: 123996689
NCBI-ProteinID: XP_046156246
LinkDB
Position
LG15:17917036..17921005
AA seq 147 aa
MSTTDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEE
LKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGL
RVFYYLVQDLKCLVFSLIGLHFKIKPI
NT seq 444 nt   +upstreamnt  +downstreamnt
atgtcaacaactgacttttatttgagatattatgtcgggcacaagggcaagtttggacac
gagttcttggaatttgagtttagaccggacggtaaactgaggtacgcgaacaacagcaac
tacaagaatgacgtcatgatcagaaaagaggcctatgtacacaagagtgtgatggaggaa
ctgaagaggatcatagatgacagtgagatcaccaaggaagatgatgcattgtggccgccc
ccagacagagtgggcagacaggagctggagatcgtcattggcgacgagcacatttccttc
acaacttccaagatcggttccttgattgatgtcaaccagtcaaaggacccagaaggcctc
cgcgtgttctactacctggttcaggatttgaaatgtctcgtcttcagtctcattggacta
cacttcaagatcaagcccatctaa

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