Oncorhynchus gorbuscha (pink salmon): 123996740
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Entry
123996740 CDS
T07892
Symbol
taf4b
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123996740 (taf4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogo03021
]
123996740 (taf4b)
03036 Chromosome and associated proteins [BR:
ogo03036
]
123996740 (taf4b)
Transcription machinery [BR:
ogo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123996740 (taf4b)
Coactivators
SAGA/TFTC/STAGA complex
123996740 (taf4b)
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
123996740 (taf4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
123996740
NCBI-ProteinID:
XP_046156337
LinkDB
All DBs
Position
LG15:complement(21564612..21597656)
Genome browser
AA seq
814 aa
AA seq
DB search
MPTTENSANETPNQAEKSASPANSGSGTANISDTIVQVGATVKAPTPSASCPAIPAFISK
GITKDPAQTQPQNANNRSSATQLPLSVMHVAPTTATVTVAPVQASTQPVTSSTTIKSVMS
NLPPTVVMITTGLRPISPMAAGPRVSSPTVTMSAQPPVRMSSPLGPAVTRVATATQAPGK
AAVIAIPRPTTFQQPAASIRPPQTTSVQLPANFHIPPGMVLIRSDSGQLMLVSQQALAAA
QGLAARAPGTGTSPSPRPPTTQVSAATLVRKAENPGVIRVPPPPSPHVTTAQSRPMVKVV
GAAPIPPAGQIQIPRPMIRPVAPVTVTRSPGPLIIPTKPTNTPRATPPTITPEVLENVKK
CKNFLVTLIKLASSGTHSADMAKNVRELVKSLLDGRLEPEEFTDQLYRELKSSPQPYLVP
FLKKSLPAVRQLTPNPQLFIQEVDQPKPQAPATSKASASKAPAPTAGRTPALLSTNSRPA
PLSAASGQSIKSTQLVIQQPRGVVYKPAVTNPAPARTYLSVQNRSLVKPMVIQSGQYYNT
GAVVRRTPFLVPPPPAQRHAFKDSVGSFREEDDINDVASMAGVNVSEENARILATNSGLV
GSVERSCQDKPFLSPALLLTHILHTGKKFGVSEVGSDVVSLVSHATQERLRDLLEKVTVV
AQHRKIALKEDYSHVQTSDVRSQLHFLEELERLEKQRRDDEERETLLRVARSRCNTDDPD
QQLLKQRAKELQQLEQAQLQHREANLTALAAIGPRRKRPLDSNGNQVGPGGIMSVLQRAG
VQRVTGVSLRDLLFCLEQDPPLRHSLTLYKGLLR
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccaccgaaaactccgcaaatgaaactccaaatcaggcagagaaaagtgcctcc
ccggcaaacagtggcagtggaaccgcgaatatctcggacactattgtgcaggtgggagcg
acagtcaaagccccgacaccttctgccagttgccctgcaatacccgccttcatttcgaaa
ggtataacgaaagaccctgcccaaacccagccacagaacgcaaataatagatccagtgcc
acccagcttccgttgtccgtgatgcatgttgcacctactaccgcaaccgtgactgtcgca
cctgtccaggccagcactcaaccggtcacgtcatccacaaccataaagtcagtcatgagc
aacctgcctccaacggtggtcatgataaccacgggactgagacccatttctccaatggct
gcgggaccgagagtgagctctccaacggtgaccatgagcgcacagccaccagtgcgcatg
agctctcctttgggaccagcggtgactcgagttgccaccgcgacccaggcaccggggaag
gctgcagtgatagccataccaagaccaacaacttttcagcaaccagctgcatcgatcaga
cctccacagaccacgtctgtccagcttccagccaactttcatatcccgccaggtatggtg
ctcatccgtagtgacagtggccaactgatgctggtgtcccaacaagctttggctgcagcc
cagggcctcgcagccagagctcctggcactgggacctctcctagccctaggccaccaacc
acacaggtgtctgcagcgactctcgtgagaaaagctgagaatccaggtgtgatcagagtg
cctcctcctcctagcccccatgtgaccacagcacagagtagacccatggttaaggtcgta
ggggctgcccccatccctcctgcaggccagatccagatccccaggcctatgatccgccca
gtggcccctgtcacagtcacccgttctcctggccctctcatcatcccaaccaaacccacc
aacacccccagagccacaccccccaccatcacacctgaggtcctggagaatgtgaagaag
tgtaagaacttcctagtgacgctgatcaagctggcctctagtggaacccactctgctgac
atggccaagaacgtccgagaactcgtcaagagcctgctggatgggaggcttgaacctgag
gagttcactgaccaactctaccgtgagctcaagtcttctccccagccctacctggtaccc
tttctcaagaaaagtctcccagctgtgcggcagctcacccccaacccacagctgttcatc
caggaggttgaccaaccgaagccacaggctccagccacctccaaggcctcggcctccaaa
gccccggcccccactgcaggccgcacccctgccctcctctccaccaactctaggcctgcc
cccctcagcgctgctagtggccagtcaatcaaatccacccagctagttatccagcagcct
agaggtgtggtgtataagcctgctgtgacaaaccccgccccggcccgtacatacctgtct
gttcagaacaggagcctggtcaaacctatggtcatacagtcaggacagtactacaacaca
ggtgctgttgtcaggcggactcctttccttgtcccaccgcctccagcccagagacacgcc
ttcaaggacagtgttggttctttcagggaggaggatgacatcaacgatgtggcctctatg
gctggggtcaacgtgagcgaggagaatgcccgtatcctagcaaccaactctgggctcgtt
ggctctgtggagcgatcctgtcaggacaaacccttcctgtccccagccctgctgctcaca
cacatcctccacactggtaagaagtttggagtgtccgaggtggggtcagacgtggtcagt
ctggtgtctcacgccacacaggagcgtctcagagacctgctggagaaagtcacagtggtg
gcacagcatcgcaagattgccctcaaggaggactacagtcacgttcagaccagtgatgtg
cgttcccagctccacttcctggaagagctggaacgtctggagaagcagaggagagacgac
gaggagagggagacactgctccgcgtcgccagaagtcgctgtaacaccgatgacccagac
cagcaactactgaaacaacgggccaaagagctccagcagttggagcaggctcagctgcag
cacagagaagccaacctcactgccctggctgccatcgggcctcgcaggaagagaccactg
gactccaatggaaaccaggtggggccaggtggcattatgtcagtactacagagggctggg
gttcagagagtgactggggtctctctgagggacctactcttctgtctggaacaggaccct
cctctacgacactctctcactctctacaagggcctgctcagatag
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integrated database retrieval system
