Oncorhynchus gorbuscha (pink salmon): 123996742
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Entry
123996742 CDS
T07892
Symbol
rad54l
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123996742 (rad54l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ogo03400
]
123996742 (rad54l)
DNA repair and recombination proteins [BR:
ogo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
123996742 (rad54l)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
Rad54_N
Zn_ribbon_InsA
Motif
Other DBs
NCBI-GeneID:
123996742
NCBI-ProteinID:
XP_046156342
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All DBs
Position
LG15:complement(21605133..21612875)
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AA seq
742 aa
AA seq
DB search
MRRSLAPSQVAKRKHGGDSSEDEDWNPEEDTKIRKGGNEKRESYISPFRKPLTQLTNQPV
CVDSNAHEALIRSILSKPFKIPIPNYTGSLGIRALGLKRAGVRKSLHDPFENGALVLYEP
PVLSAHELIKAEKDKLPVHVVVDPVLGKVLRPHQREGVKFLWDCVTGRRIADSYGCIMAD
EMGLGKTLQCIALMWTLLRQSPDAKPEIDKAIVVSPSSLVRNWYNEVGKWLGGRITPVAI
DGGSKEEIDKKLVNFMTQHGLRVPTPILIISYETFRLHAEVLHKGKVGLVICDEGHRLKN
SDNQTYQALNAMSAQRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKRFELPILK
GRDADASDKDRQAGEEKLKELISIVNGCLIRRTSDILSKYLPVKIEQVVCCRLTPLQSEL
YKLFLRQAKPLQTLQQQGKISVSSLSSITSLKKLCNHPALIYDKCVERDEGFDGALNLFP
TGYSTKAVEPQLSGKMLVLDYILAMTRSTTSDKVVLVSNYTQTLDLFEKLCRTRRYLYVR
LDGTMSIKKRAKIVERFNSPSSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQ
AMARVWRDGQKKTCYIYRLLSTGTIEEKILQRQAHKKALSSCVVDEEQDVERHFSLGELR
ELFHLSEETTSDTHDRFRCRRCVNGRQVRPPPEDSDCTCDLSQWQHCSDKRGLRDPILQA
SWDAAISFVFHQRSHEDQRGVV
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaggagaagcctagcaccaagccaggttgccaaaaggaagcatggaggagattcctcc
gaggatgaggattggaatccagaagaagataccaaaataaggaagggaggaaatgagaaa
agagaaagctatatttctcccttcagaaagcctttgacacagttgaccaaccagcctgta
tgtgtggacagcaatgcacacgaagccttaattcgaagtattctctcaaaaccttttaaa
atcccgatccccaattacacaggctctctggggataagagcactaggactgaagcgtgcg
ggggtaaggaagagtcttcacgacccatttgaaaacggtgcactggtcctctatgagcct
ccagtgctgagcgctcatgagctgataaaagcagagaaagataaactgcctgtacatgtt
gtcgtggatccagtccttggaaaggtcctcagaccccatcagagagagggagtgaaattc
ctgtgggactgtgtgaccgggagacgtattgccgactcgtatggctgcatcatggctgat
gagatggggctggggaaaaccctgcagtgtattgccctcatgtggaccctgctgcgccag
agtcctgatgccaagcctgagatagacaaggccattgttgtttcaccctccagtttggtt
cgtaactggtacaatgaggtgggaaagtggctgggcggacgcatcacaccggtggccatc
gatggtggatccaaggaggagatagacaaaaaactagtgaacttcatgacccagcatggc
ttgagggttcctactccaatcctgatcatttcatacgagacgttccggcttcatgctgaa
gttctacacaaaggaaaagtgggacttgtcatctgtgatgagggtcatcggctgaagaac
tctgacaaccagacgtaccaggctctgaatgctatgagtgcccagagaagggtgcttatc
tcaggcactcccattcagaatgacctgctggaatacttcagtctggtgcactttgtcaac
gctggtatcctgggaacagcccaggagtttaagaagcgttttgagctccccatcctgaag
ggtcgtgatgcagacgccagtgacaaagacaggcaggctggagaggagaaactcaaggag
ctgatcagcattgtcaatggatgcttgattcggagaacctcagacatcctctcaaagtat
cttcctgttaagatcgagcaggtcgtctgttgcaggctgacccccctccagtcagagctg
tataaactgttcctgaggcaggctaagcccttacagacactgcagcagcagggcaagatc
agtgtctcctctctgtcctccatcacctctctcaagaagctctgtaaccacccggctctc
atctatgataagtgtgtggagcgagatgagggcttcgatggggccctgaatctcttccct
acaggatactccaccaaggctgtggagccacagctttctggtaaaatgctggttctggac
tatatcctggccatgaccagaagcaccaccagtgacaaagtggtgttggtctccaactac
acacaaacactggacctctttgagaagctttgtcgaactcgaagatacctctacgttcgg
cttgatggcacaatgtccatcaagaagagagcaaagatagtggagaggttcaacagccca
tctagcccagagttcatatttatgctgagcagcaaagctggggggtgtggcctgaatctg
attggtgctaatcgcctggtgatgtttgaccctgactggaacccagccaatgatgagcag
gccatggctcgagtctggagagacggacagaaaaagacctgctacatctacagactgctt
tcaacagggacaattgaggagaagatccttcagaggcaggcccataagaaggctctgagc
agctgtgtggtggacgaagagcaggatgtggagagacacttctctctgggggagctacga
gaactctttcatctcagtgaggagaccaccagtgacacgcatgacaggttccgctgtcgg
cgctgtgtgaatgggcgacaggtgcggccccctcctgaggactctgattgtacctgtgac
ctgtcccagtggcaacactgctctgacaagaggggcctgagagaccccatactgcaggcc
tcctgggacgctgccatctccttcgtcttccaccagcgctcccacgaggaccagagaggg
gtcgtgtga
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