Oncorhynchus gorbuscha (pink salmon): 123996822
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Entry
123996822 CDS
T07892
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13-like isoform X1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
123996822
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123996822
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123996822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8
zf-RING_16
Prok-RING_4
DUF7027
zf_RING_Vps8_fungal
zf-RING_4
PHDvar_NSD
PHD
RINGv
zf-RING-like
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
123996822
NCBI-ProteinID:
XP_046156525
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All DBs
Position
LG02:complement(9650016..9736455)
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AA seq
384 aa
AA seq
DB search
MLLSLGMLMLSATQIYTIFTVQLFAFLNLLPVEADISAYTFDNKTGNFDDLPARFGYRLP
SDGLKGFLIGARPENACEPIDPPPIRDNLTGAFIVLIKRFDCNFDIKVLNAQKAGYKSAI
VHNVDSDDLISMGSNDLDILKQIDIPSVFVSEETANSLKEDYTYDKGGHVVLMPDFSLPL
EYYLIPFLITVGICLILIVVFMITKFVQDRHRARRSRLRKDQLKKLPIHKYKKGMEGKGD
VYDVCAICLDEYEDGDKLRVLPCSHAYHSKCVDPWLTKTKKTCPVCKQKVVPSAGDSDSD
DDSGTEENEVSESTPLLRSQASASGHSFGTATGASRSEPNQESSEYEDTSDDSEEEDVTV
ETETVVVQLQEPRPDDHDAPDWLA
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctcccttgggatgctgatgctgtctgccacacagatctacaccatcttcacc
gtgcagctcttcgccttcctcaacctgctgcccgttgaggccgacatctctgcctacaca
tttgacaacaagacaggtaattttgatgacctgcctgcacggtttgggtaccggctgccc
agtgatggactcaagggctttctgattggtgcacggcctgaaaatgcctgcgagcccatc
gacccgccccctatccgggacaacctcactggcgccttcatcgtgctcatcaagcgcttc
gactgtaacttcgacatcaaggtgcttaatgcccagaaggccgggtacaagtcggccatt
gttcacaacgtggactctgatgacttaatcagcatgggatccaatgatctggatattttg
aagcaaatcgacattccatcagtgtttgttagtgaagagactgccaattccctgaaagaa
gactacacatacgacaaggggggtcatgtggtcctcatgccagacttcagcctgcctctg
gaatactacctgattcccttcctcatcaccgtgggaatctgcctcatcctcatcgttgtt
ttcatgatcaccaagtttgtccaggacagacacagggctcggagaagccgtttgcgcaag
gaccaactgaagaaactccccattcacaagtacaagaaaggtatggagggaaaaggcgac
gtctacgatgtgtgcgccatctgcctcgacgagtatgaggatggagacaagctccgggtt
cttccctgctcccacgcttaccacagcaaatgcgtggacccctggctaaccaagaccaag
aagacatgtcccgtgtgcaagcagaaggtggtcccctccgcaggcgactcggactcagat
gacgacagcgggaccgaggagaacgaggtgtctgagagcactccgctgctacgctcccag
gcctccgccagcggccactccttcggcaccgcgacgggggcctctcgctcggagcccaat
caagagtcctcggagtacgaagataccagcgacgacagcgaggaggaggacgtcaccgtg
gagactgagacggtggtggtccagctgcaggagcctcgtcccgatgaccatgacgcgcct
gattggttggcctga
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