Oncorhynchus gorbuscha (pink salmon): 123996971
Help
Entry
123996971 CDS
T07892
Name
(RefSeq) transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
123996971
Transcription factors [BR:
ogo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
123996971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
123996971
NCBI-ProteinID:
XP_046156831
LinkDB
All DBs
Position
LG15:complement(33784299..33786324)
Genome browser
AA seq
315 aa
AA seq
DB search
MYNMMETELKPPAPQTNSGGTGNSNSSGNNQKNSPDRVKRPMNAFMVWSRGQRRKMAQEN
PKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKD
KYTLPGGLLAPGGNGMGAGVGVGGGLGGGVNQRMDSYAHMNGWTNGGYGMMQEQLGYGQH
PGLNAHNNAQMQQMHRYDMSALQYNSMTNSQTYMNGSPTYSMSYSQQSNPGMTLGSMGSV
VKSESSSSPPVVTSSSHSRGAPCQTGDLRDMISMYLPGAEVPEQTAQSRLHMSQHYQSAP
VPGTTINGTLPLSHM
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggaaactgaactgaaaccccccgcaccccagacaaattctgggggt
actgggaattcaaattcatctggaaacaaccagaaaaacagcccggaccgagtcaagaga
cccatgaatgccttcatggtttggtcgaggggacaacgaaggaagatggcacaggaaaac
cccaaaatgcacaattcggaaataagcaaaagacttggggccgagtggaagcttctatct
gagagcgaaaagcgacctttcattgacgaagcgaagcgtctccgggctctccacatgaag
gaacatccggattacaaataccgaccccggaggaaaaccaagacgctgatgaagaaggac
aagtacactctgccaggtgggcttcttgcaccgggcggtaatggcatgggcgcgggagtg
ggtgtagggggaggcttgggtggtggtgttaatcaaaggatggacagttacgcacatatg
aacggctggacaaatggaggttatggcatgatgcaggagcagcttggctacgggcagcac
cctggtttaaacgctcacaacaacgcgcagatgcagcaaatgcaccgctatgacatgagc
gcacttcagtacaactccatgactaactcccagacctacatgaacggatcacccacgtat
agcatgtcctactcacagcaaagcaatcctggaatgactctgggctccatgggttcggtg
gtcaagtcagagtccagttccagtccccccgtagtcacatcgtcgtctcactccaggggt
gctccatgtcagacaggagacctacgggacatgatcagtatgtacttaccgggcgcagag
gtgccggagcaaactgctcaaagcagactccacatgtcccaacattaccagagcgcacct
gtacccggcacgacgattaatggcacactcccattatcacatatgtaa
DBGET
integrated database retrieval system
