Oncorhynchus gorbuscha (pink salmon): 123997020
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Entry
123997020 CDS
T07892
Symbol
notch2
Name
(RefSeq) LOW QUALITY PROTEIN: neurogenic locus notch homolog protein 2
KO
K20994
Notch 2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
123997020 (notch2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
NOD
NODP
Ank_5
Ank_3
EGF_3
Ank_4
EGF_Teneurin
EGF_DL_JAG
JAG1-like_EGF2
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
123997020
NCBI-ProteinID:
XP_046156909
LinkDB
All DBs
Position
LG15:complement(35721647..35782966)
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AA seq
2490 aa
AA seq
DB search
MGQLPGFASDKVLVFVVCCIRLSLALQCLDAVKPCVNNATCATFTNGTGYCRCAAGFLGE
YCHHKDPCHPGYCLNGGNCSVAVSGIPGSPTCSCPLGYTGQHCQTPQNSTCYPNNPCANR
GVCTLLSLDKYKCQCAHGWTGIRCEHVDTCLPVPCANGGTCSSLSGSKFSCTCPPGYWGP
RCLNDTDECAASAPVCQNQGACVNTPGSYRCNCAPGFTGRHCETPYIPCAPSPCLNGGTC
RQTSETSYWCHCLPGFNGTNCDNNIDDCPDHHCRNGGTCMDGVNTYNCKCPPEWTGQSCT
EDVDECRLQPNTCQNGGTCSNIQGSYTCVCVNGWSGLDCSENIDDCATAACTKGSTCIDR
VASFLCVCPYGKTGLLCHVNDACISSPCRDGAQCDTNPINGMFNCNCAPGYKGSTCNDDI
NECIIGPNPCEHGGLCVNTDGSFTCNCARGYGGPRCETDINECVSSPCQNDGTCLDRIGD
YSCICMEGFEGTHCEIDINECASSPCLNQGICLDQVKRYVCQCPLGFSGEMCQIDIDECS
STPCLNGAKCIDRPNGYECECAEGFYGPLCKENIDDCDPEPCHHGVCRDGIATFSCDCDP
GYTGSICNIQVMECHSLPCQNRGRCIDLVNKYQCNCLPGTSGVNCEINVDDCASNPCEYG
ECQDGINEYKCVCAPGYTGAKCDVDINECNSSPCMSGGTCVDKVNGFICQCPPGTHGPLC
HSGTDHCAPRPCVHGDCVEQQSGYHCECESGWVGQHCDQEKDECQSSPCQHSGSCVDRLN
GYSCQCRPGFTGVNCEVNIEECASSPCENHGTCVDGVNSYTCLCAAPYSGKHCEEELVPC
ASHPCERGGVCQPTPDYTFYTCRCPSGWQGPRCTEDVDECRKNPCQNSARCINSQGSYVC
KCQPGYSGLNCQTNIDDCSPNPCLNGGSCVDGVGGFSCDCRPGFDGERCEAEMDECASQP
CRNGAVCRDYVNSFVCECRPGFDGILCEHNIPECTESSCLNNGTCVDDINTFSCRCRPGF
YGTFCQYEQNECDSQPCKNGGTCTDGLGSYRCTCPVGYNGQNCQNFVNLCSQPLCRNGGS
CSQSQTTWSCHCPVGWTGLYCDVPNMSCQDYAARNGIPVEMVCKHMGRCVNVGNAHQCQC
QPGYTGSYCDKTVDECQSNPCRNGATCMDYQGTYECMCKAGYQGVNCEYDVDECHSNPCR
HGGTCINLINRFSCACPPGTHGVQCEVNMDDCAPKPGSWGPRCLNGGQCMDGVGRYTCSC
PPGFAGEHCEGDVNECLSGPCHSLGSLDCVQLANDYQCRCRLGYTGRLCESMVDLCQSKP
CHNSGTCSMNMSSVHGYSCTCQPSFTGFNCGEVEGYNCAQLRCQNGGHCQDSQGGHLHCR
CQPGFSGSRCETVHSCQNRPCLNGGTCMKDPHNPYQYSCRCPAHFSGRHCENVIFDQSPR
PRTPSCPYVECEQRSGDKMCDPQCNNHECQWDGGDCSLHWRRPWVNCTASVPCWELFRNG
RCDHECDNSGCLFDSFECQESTKSYCKYDDYCADHYANKICDKSCNTEACGWDGLDCSED
TPAKVVDGTLVIVVLLQPEELLGDVRGFLRSLGTLLHTNLRVKMDAQQKLMVYPYYGLEH
DNAIEGQSATMKRRGKRELDKEVIGSKVYLEIDNRECAESSMDCFSSTELAASFIAAEYL
KSALPYPVVSVDSDHMDPQKPPFMLYLAVGAAVIILLILVLGVLAAKRKRKHGILWLPDG
FLAKKDDKRREPLGQDDFGMKNFKTQDGGMMDGGQRWMEEEAPPKKPRTEDKPLLPLGVD
GGVDRREWTLQHHKAADISLTPPQADLEADCLDVNVKGPDGFTPLMLASLRNGGASDCGL
QAEEEEESGGDEPGPNVISDLITQGATLIAQTDRTGETALHLAARYARADAAKRLLDAGA
DANAHDNMGRTPLHAAVAADAQGVFQILIRNRATELDARMNDGTTPLILAARLAVEGMVE
ELVHCHADINAVDDHGKSALHWAAAVNNVEATLVLLKNGANRDMQDNKEETPLFLAAREG
SFEAAQVLLDHYSNRDITDHLDRLPRDTAQERMHHDIVRLLDQYNLVHSPHNGPNHMGGG
VGHSLVCGGNGAGYMGMRPGPHGKKSRRGGVKVGGPGGGTAKELKDMKAKRRKKPTGGEG
PAVGAVGGASGNGTKAAGGLSESSVTMSPVDSLESPHSYTGDAAVASNTANSPPLLSSPS
SRPLLPPVSHMLGQQQSWLGLKHGYGGHMFSLLPQQMGNGHSGISQHHGQGLLTPMNVTM
SREQLPPIVTFQMMAPGGGQSLLKQPQPGQVQSQGQNQGQPRSQQGPTHLHCTQGMMYQM
PGVGLQHSLSHSLPHSHGLAHSHGMVHDGQSRQQLPPYQAIQSPVDKYPTPPSQHSYATA
GSEGTTPGHPAHPPSEHPYLTPSPESPDPWSSSSPHSNSDWSDVTTSPTPLGIPHALPPP
RHTHIPEQPQSQQTQQNPQQPQHGNMQVFV
NT seq
7473 nt
NT seq
+upstream
nt +downstream
nt
atgggccaattacccggttttgcttcggacaaagtattagtcttcgtcgtctgctgcatt
cggctttctttggctcttcagtgtctggatgctgttaagccgtgtgtgaacaatgctacg
tgtgccaccttcaccaacgggacagggtactgcaggtgtgccgcaggcttcctgggcgag
tactgccatcacaaagacccgtgtcatcctggttactgtctgaatggagggaactgctca
gtggctgtgtcgggcatcccgggcagccccacctgctcctgtcccctgggctacaccggg
cagcactgtcaaaccccccagaactccacctgctatcccaacaacccttgtgccaacaga
ggagtatgcaccttgctctccctcgacaagtacaagtgccagtgtgctcacggatggaca
ggcatacgatgtgagcatgtggacacctgtctaccagtaccctgtgctaacggaggcacc
tgcagctctctgtccgggagcaagttcagctgtacctgtcctccaggctactggggtcct
cgctgcctcaacgacactgatgagtgtgctgcctccgccccggtgtgtcagaaccaaggg
gcgtgtgtcaacacccccggctcctacaggtgtaactgtgcccccgggttcaccggccgc
cactgtgagaccccctacatcccctgcgccccctcgccctgcctcaatgggggcacgtgt
cgccagacttctgagaccagctactggtgccactgcctgccaggtttcaatgggactaac
tgtgacaacaacattgacgactgccccgaccatcactgccgaaatggagggacctgcatg
gatggcgtcaatacctacaattgcaaatgtcccccggaatggactggtcagtcctgtaca
gaggatgtggatgagtgtcgcctgcagcccaacacgtgtcagaacggagggacctgcagc
aacatccagggcagctacacctgtgtgtgtgtcaacggctggagtggcctggactgctct
gagaacatagatgactgtgctacggctgcctgcaccaagggctccacctgtatcgaccgt
gtggcatccttcctctgtgtctgcccctacggaaagacaggtttgctgtgccacgtgaac
gatgcctgcatcagtagcccgtgcagggacggggcacagtgcgacaccaaccctatcaac
ggcatgttcaactgcaactgtgccccaggctacaagggaagcacctgcaatgacgacatc
aacgagtgcatcattggtccaaacccctgtgagcatgggggattgtgtgtgaacacggat
ggctcgttcacatgtaactgtgcaagaggttatggtgggccgcgctgtgagacagacatc
aatgagtgtgtctccagcccctgccagaacgacggcacctgtctggaccgcataggagac
tacagctgcatctgtatggaaggatttgagggaacacactgtgagattgacatcaacgag
tgtgccagctctccatgtctgaaccaagggatctgtctggatcaagtcaaacgctacgtc
tgccagtgccctctaggattcagtggggagatgtgtcagattgacattgacgagtgttcc
agcacgccctgcctcaacggggccaagtgtatcgaccgacccaacggatacgagtgtgaa
tgtgctgaaggcttctatgggccactgtgtaaagagaacatagatgactgtgacccggag
ccctgccaccatggtgtgtgtcgtgatggcatcgccaccttctcctgtgactgcgacccg
ggctacaccggctccatatgtaacatccaggtcatggagtgccacagcctcccctgccag
aaccgcggacgctgcatcgacctggtcaacaagtaccagtgcaactgtctgcctggcacc
tcaggggtgaactgtgagatcaatgttgatgactgcgccagtaacccctgtgagtatgga
gagtgccaggatgggatcaacgagtacaagtgtgtctgtgctccagggtacacaggtgca
aaatgtgacgtggacatcaatgagtgtaattctagcccgtgtatgagtgggggcacatgt
gtagacaaggtgaacggcttcatctgccagtgcccccctggcacccacggccccctgtgc
cactctggcactgaccactgtgccccccggccctgtgtacacggagactgtgtagagcag
cagagcgggtaccattgtgagtgtgagtctggctgggtggggcagcactgtgaccaggag
aaggatgagtgccagtccagcccctgccagcacagtggcagctgtgtggacagactcaat
ggatactcctgccagtgtcgccccggattcacaggtgtgaattgcgaggtcaacatagag
gagtgtgcatcaagcccgtgtgagaaccatggtacctgtgtggacggagtcaacagctac
acctgcctgtgtgccgccccgtactcaggaaaacactgcgaggaggagttggttccctgt
gcgtctcatccatgtgagcggggaggtgtgtgtcagccaaccccagactacaccttttac
acctgtagatgtcccagcggctggcaaggccctcgttgcactgaggatgtggatgagtgc
aggaagaacccgtgtcagaacagcgcccgttgcatcaacagccagggcagctacgtgtgc
aagtgtcagccaggctacagcggtctcaactgccaaaccaacatcgatgactgctccccc
aacccgtgtctgaacggcggttcctgtgtggatggagtgggagggttctcctgtgactgc
cggccagggtttgatggggagcgctgtgaggcagagatggatgagtgtgccagtcagccg
tgccggaacggagccgtgtgccgggactacgtcaacagcttcgtctgcgagtgccggcca
ggtttcgacggaatcctatgtgaacacaacatcccagaatgcactgagagttcctgtctg
aataacgggacctgtgttgacgacatcaacaccttctcgtgtcgttgtcgtcctggtttc
tacgggaccttctgtcagtatgagcagaatgagtgtgactctcagccctgtaagaacgga
gggacctgtacagacggcctaggatcctaccgttgcacctgccctgtgggctacaacggg
cagaactgccagaactttgtgaacttgtgtagccagccactgtgcaggaacggagggtcc
tgttcccagtcacagaccacctggtcatgtcactgtcctgtgggctggactggtctgtac
tgtgatgtccccaacatgtcctgtcaggactatgctgctcggaatggtattccagtggag
atggtgtgtaagcacatgggtcgctgtgtgaacgtcggtaatgcccaccagtgtcagtgc
cagcctggctacacaggcagctactgtgacaagactgtggacgagtgccagtcgaacccc
tgccgcaacggagccacttgcatggactaccagggcacatatgagtgtatgtgcaaggct
ggctaccagggggtgaactgtgagtatgacgtagatgagtgtcactctaacccttgtcgt
catggaggaacctgcatcaacctcatcaaccgcttctcctgcgcctgcccacctggtaca
catggtgttcagtgtgaggtgaacatggacgactgtgctcccaagcctggctcctggggg
cctcgctgtctgaacgggggccagtgtatggatggggtgggccgctacacctgctcctgc
ccccctggcttcgctggggaacactgtgagggggacgtcaacgagtgtctctctggaccc
tgtcactctcttggtagcctggactgtgtgcagctggccaacgactaccagtgccgctgt
cgcctgggctacaccggacgcctctgtgagtccatggtggatctgtgccagtctaagccg
tgccataacagtggcacctgttccatgaacatgagctcagtgcatggatactcatgcacc
tgtcaaccaagtttcactggcttcaactgtggagaggtagagggctacaactgtgcccag
ctgcgttgtcagaacggcgggcactgccaggattctcagggtggtcatctgcactgccgt
tgccagccaggcttcagtgggtcgcgctgcgagaccgtgcacagctgtcagaaccgaccc
tgtttgaatggaggcacctgtatgaaggacccacacaacccataccagtacagctgtcgc
tgcccagcccacttctcaggcaggcactgtgagaatgtcatcttcgaccagtccccccgc
ccccgcaccccctcctgcccttatgtagagtgtgagcagcggtccggggataagatgtgt
gacccgcagtgcaacaaccatgagtgccagtgggacggaggggactgttctctacattgg
cgccggccatgggtcaactgcaccgcctccgtgccctgctgggagctgttccgcaacggc
cgctgtgaccacgagtgtgacaactctggctgcctcttcgacagctttgagtgtcaagag
agcaccaagtcctactgcaagtatgatgactactgtgcggatcactatgccaacaagatc
tgtgacaagagctgtaacacagaggcatgtggctgggatggcctggactgctctgaggac
acccctgctaaggtggttgatggcactctggtgatcgtagtgttactgcagcctgaggag
ctgctgggagacgtgagaggcttcctgcgctccctgggaaccctgctgcacaccaacctc
cgtgttaagatggacgcccagcagaaactcatggtgtatccttactatggcctggagcac
gacaacgccattgaaggacagtctgctacaatgaaacgtagaggcaaacgggagctggac
aaggaggttatcggatctaaggtttacctggagatcgataaccgagagtgtgctgagagc
tccatggactgtttctccagcacagagctggctgcatccttcatcgctgcagagtacctg
aagtctgcgctgccctaccctgtggtctctgtcgacagtgaccatatggacccccagaag
ccccccttcatgctgtacctggctgtgggagctgctgtcatcatcctgcttatcctggtg
ctgggtgtgctggccgccaagaggaaacgcaaacacggcatcctctggctccccgatggc
ttcctggccaagaaagacgacaagaggagagagcccctgggccaggacgacttcggcatg
aagaacttcaagacccaggatggagggatgatggacggaggccagagatggatggaagag
gaggctccgcccaagaaaccaaggactgaggacaagcccctgctgccactgggtgtggat
ggaggagtggaccgacgggagtggactttacagcaccacaaggctgctgacatctctctc
actccaccacaggctgatctggaagcagactgccttgatgtcaatgtcaaaggaccagat
ggctttacccccctgatgctggcttctctacgaaacgggggggcgtctgattgcggcctg
caggcagaggaggaagaggagagtgggggagatgagccgggacccaacgtcatctcagac
ctcatcacccagggtgcaacactcatagcccagacagatcgcaccggggagacggcactc
cacctggctgctcgctatgcccgggccgatgccgccaaaaggctgctggatgccggggca
gatgccaatgctcacgacaacatgggtcgcacacctctccacgctgctgtggcagccgat
gcccagggagtgttccagatcctgatccgtaaccgggccaccgagttggatgccaggatg
aacgatggcaccacacctctgatcctggctgccaggctggctgtggagggcatggtggag
gaactggtccactgccacgcggacatcaatgctgtcgacgaccacggtaagtctgctctg
cactgggcagctgctgtgaacaatgtggaggccaccctagtgctgctgaagaatggagcc
aacagagacatgcaggacaacaaggaggagaccccattgttcctggcagccagggagggt
agttttgaggcggcccaggttctgctggaccactactctaatagggacatcacagaccac
ctggaccggctgccccgtgataccgcgcaggagcgcatgcaccatgacattgttcgtctg
ctcgatcagtacaacctggtccacagccctcacaacggccccaaccacatgggcggggga
gtgggacactccctggtctgtgggggcaacggagcgggctacatgggcatgcggcccggg
ccccacggcaagaagagcaggcggggcggggtgaaggttggaggtcctggcggaggtaca
gccaaagagctgaaagacatgaaggctaagcggaggaagaagccaacaggaggagaaggg
cctgcagtgggagctgttggaggagccagtggcaatggcactaaagctgcaggagggctg
tcagagagctcagtcaccatgtctcctgtggactccctggagtctccacactcgtacaca
ggagatgctgccgtggcatccaacacggccaactctcctcctctcctgagcagcccctcc
tctaggcccctgctgcctcccgtcagccacatgctgggccaacagcagagctggctgggt
ttgaagcatggatacggcggccacatgttcagcctccttccccagcagatgggtaacggc
cattctggtatttcccagcaccacggccaaggcctgctcacccccatgaatgtcaccatg
agccgagagcagctgcctcccatcgttaccttccagatgatggcaccggggggcgggcag
tccctgctgaagcagccccagcctgggcaggtgcagtcacaggggcaaaaccaaggccag
ccccgctctcagcagggccctactcacctgcactgcacccagggcatgatgtaccagatg
cccggcgtgggcctccagcacagcctgtcccacagccttccccattctcacggcctggcc
cacagccacggcatggtgcatgacggccagtcccgccagcagctccctccatatcaggct
atccagagccccgtggataagtaccccacccctccctctcagcacagctacgccaccgct
ggctcggagggcaccaccccagggcacccggctcacccgcccagtgagcacccgtacctc
accccctcccccgagtcccctgacccctggtcctcttcctccccccactccaactcagac
tggtctgacgtcaccaccagccccacccccctggggatcccccatgcactgccgcctccc
cgccacacacatattccggagcagccacagtcccagcagacgcaacagaacccccagcag
cctcagcatggcaacatgcaagtgtttgtatag
DBGET
integrated database retrieval system
