KEGG   Oncorhynchus gorbuscha (pink salmon): 123997069
Entry
123997069         CDS       T07892                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL-like
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    123997069
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ogo01009]
    123997069
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ogo03021]
    123997069
Protein phosphatases and associated proteins [BR:ogo01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     123997069
Transcription machinery [BR:ogo03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     123997069
    Little elongation complex (LEC)
     123997069
SSDB
Motif
Pfam: ELL Occludin_ELL CC149 Seryl_tRNA_N
Other DBs
NCBI-GeneID: 123997069
NCBI-ProteinID: XP_046157008
LinkDB
Position
LG15:37571256..37612486
AA seq 649 aa
MAALKEEQCYGLSCGRVSNGSNVSVFHVKLTDSALKAFEGYQSSKGLSSQPLIRFTGSQG
KISIPWSENQNELRLFTFYLSNVGRDNPQGSFDCIQQYITSEGSIQLDCLGGIQDKITVC
ATDDSYQKARQSMAQAEEETRSRGAIVIKPGGRYVGKKVQIRKPAPGLSDIAPSRRTSRP
VIISSSAAKKSTAQQRPLRERLTHLLALKPYRKPELILRLQKDGLLPFDKDSLDSLLQQV
ANLNVRDNTFTLKDSLFKDIQKDWPGYTEGDQQLLKRILVRKMCQTPSTTTVAPPAEVPL
PVSPPKELASSSPSQKRPAADFIDPLANKKPRISHMANKTAVPINGKQSSSNGKEGSGAV
VVAPAVEGVTSSSQLPLLDIHRPFDPLSDVSNDSSHNGRDCEGQEAAVAERLSQPPVFSG
PAVLSVPTLGLSSLGHSGLVGPQSKSTLPSLHGKSKKKSKKHKDKEKSKEREGRGRAREK
ERKGAEERVPEPRKACDITSSPENLKSSSIPHSSTDLNGMCNNTSVPSSSTEMADYLSEY
TVIGSSEQRQTYKNYFNTEYSEYRGLHARIEGITRQFTVLDTELKQLQQGTDKYKTIHNQ
ILQEYRKIKKTNPNYSQEKNRCEYLHSKLSHIKKLIAKYDQQQLQNWTG
NT seq 1950 nt   +upstreamnt  +downstreamnt
atggcggcgttgaaggaggagcagtgctacggattgtcctgtggacgagtgagcaatggc
agtaatgtctccgtctttcacgtaaaactcactgacagcgccttgaaagcatttgaaggt
tatcagagcagcaagggcctgtcttcacaaccgctgatacgatttactggaagccaaggg
aaaatctcaataccgtggtcggaaaatcagaatgagctgcgactgtttactttctacttg
tccaatgtgggtagagacaacccacagggcagctttgactgcatccagcagtacatcacc
agtgaggggagcattcagctggactgcctgggtggaatccaggacaagatcacggtgtgt
gccacggacgactcttatcagaaggccaggcaaagcatggctcaggcagaggaggagacc
cgcagcaggggtgcgatcgtcatcaagcctggggggagatacgtgggtaagaaggtgcag
atccggaaaccggcacctgggctgtctgacatcgctccatcgcggcggacgtcgcggcct
gtcatcatctctagcagtgcggcgaagaagagcacagcgcagcagaggcccctgagggag
cgcctcacccacctgctggccctcaagccttacagaaagcctgagctcatcctgcgcctg
cagaaggatggcctcttgccctttgacaaggactctctggacagcctcctgcaacaggtg
gctaacctaaatgtgagagacaacaccttcacattgaaggactctttgttcaaggacatc
cagaaggactggccaggctacactgagggagaccagcaacttctgaagaggatccttgtt
cggaaaatgtgtcagactccaagcaccaccacagtggctcctccagctgaggtcccactc
ccagtgagccctcccaaagagctggctagcagctccccatcgcaaaaacgacctgctgca
gatttcatcgatcctctggccaacaaaaagcccaggatatcacacatggctaacaaaaca
gcagtaccaataaatggcaagcagagttcgtccaatggaaaggaggggagtggggcagtg
gttgtggcgccagcggttgaaggcgtgacatccagctcccagctccccctacttgacatc
caccggcccttcgacccactctccgacgttagtaacgactccagccacaatggccgagac
tgtgagggccaagaggccgctgtagcagagagactgagccagccaccagtcttctctggg
cccgcagtactgtccgtaccaaccctgggcctctcgtccctcggacactccggccttgtt
gggccccagagcaagagcaccttgccctccctgcacggcaagtccaagaagaagtccaaa
aaacacaaagacaaggaaaagtccaaagagagggaagggagggggagagcgagagagaag
gagaggaaaggagcagaggagcgtgttcctgagccaagaaaagcctgtgacatcacctcc
agccctgagaacctgaagagcagtagtattccacacagcagcacagatctcaatggaatg
tgcaacaacaccagtgttccttcgtcatcgactgagatggcagactatttatcggagtat
acagtgattggctcttccgagcagcgtcaaacatacaagaattactttaatactgagtat
agtgagtaccggggcctccacgctcggatagagggcatcacccggcagttcactgtgctc
gacactgagcttaagcagctccaacaaggcacagacaagtacaagacaatccacaaccag
atactccaagagtatcgtaaaataaaaaagactaatccaaactatagccaagagaagaac
cgctgtgaatatctacacagcaaactgtcacatataaagaaacttatagcaaagtatgat
caacagcaacttcaaaactggactggttga

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