Oncorhynchus gorbuscha (pink salmon): 123997088
Help
Entry
123997088 CDS
T07892
Symbol
si:dkey-110c1.10
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
123997088 (si:dkey-110c1.10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
123997088 (si:dkey-110c1.10)
04131 Membrane trafficking [BR:
ogo04131
]
123997088 (si:dkey-110c1.10)
03029 Mitochondrial biogenesis [BR:
ogo03029
]
123997088 (si:dkey-110c1.10)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ogo04812
]
123997088 (si:dkey-110c1.10)
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
123997088 (si:dkey-110c1.10)
mRNA cycle factors
P-body specific factors
123997088 (si:dkey-110c1.10)
Membrane trafficking [BR:
ogo04131
]
Others
Actin-binding proteins
Myosins
123997088 (si:dkey-110c1.10)
Mitochondrial biogenesis [BR:
ogo03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
123997088 (si:dkey-110c1.10)
Cytoskeleton proteins [BR:
ogo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
123997088 (si:dkey-110c1.10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
nSTAND3
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
123997088
NCBI-ProteinID:
XP_046157058
LinkDB
All DBs
Position
LG15:38106291..38144730
Genome browser
AA seq
1685 aa
AA seq
DB search
MIGTMELYAKGASVWVPDPEAVWVSAKLLKDYNLGDENVVLQISDGREVQYPVASPSGLP
PLANPDILEGENDLTALSFLHEPAVLHNLRVRFLDYSSIYTYCGIVLVALNPYDQLPIYG
EEVIDAYSGQDMADMEPHIFSVAEEAYRTMTREEKNQSIIISGESGAGKTVSAKFTMRYF
AVVGGAAQQTSVEERVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFGRKGDIIGANMR
TYLLEKSRVVFQASQERNYHIFYQLCASRDLPEMRVLKLGGAETFRYTNQGGEDSMQIPG
TDDVVDLERTRNAFTILGVPPDQQMELFRILAAVLHLGNVNIQASGRGGDRSYIDGEERS
LSVFSKLLGVERTQMAHWLCHRRLTVGGELLVKPMPGQQSLEARDALAKHVYGQLFTWTV
TRLNSALRAQSEKPKSFIGVLDIYGFETFERNSFEQFCINYANEKLQQQFNRHVFQLEQE
EYVREELPWSRIEFSDNQPCIALIEGQLGLLDLLDEECRMPKGSEESWARKLYDQHQSNN
PSPHFRKPRMSNTAFIILHFADMVQYECDGFLDKNRDTVFEEPINILRASQSELVSELFQ
QKPVGGSLSLSEGKSSLSNGSLRSGPGMRAQREHKLTVGFQFRQSLQLLMDTLNSTTPHY
IRCIKPNDLKEPFMFDPKRAVQQLRACGVLETIRISAAGYPSRWTYAEFFSRYRVLLRGG
GVQTQEQIQALCQRALPELIPDPEQYCFGKTKVFFRAGQVALLERLRAERLRAAGVVIQS
WVRGWLGRRRYIKTRWATLTIQRYTRGALARRLADLLRYTKAALIIQKTYRMVAIRQMFL
MIREATVTIQAFTRGSLARRQYRRVLAERAAVLLQSAVRGWLARLAYRRVRAAIVLMQCC
VRRRAARRELLKLKAEARSVEKFRELNKGMEVKLMQLQLRADQKARESGALRETLQAERK
AHNTELDTLRGALVKLEYQLETQLQTQQSQPSTAITEEETEERRRAEEKAAQEILRLTQE
VQALRVERDCLGKEKEDLTTRLLEQETAQEESVVQAVAQEGKALTAELDEERRKYQGLLR
EFTRLEQRYENLREMSMLTEHSKGYRRTDSNQSLIMEPPSPSPMSPPFSGPPTFPATPSF
FGPPPFPSPEEVRRVSVTSPTAERRAWLNSDTLMDTLMENMGVAKDSAGKMTGEDLWHAY
DAVRVANKFLENQLRSQRSQEEAELEALRLQAKRTCSDPSPSADQQYLVGLVEAREQEVC
RLRRELKELRHTVTLRRLLAQTGPVLSQSTEDSSAPHTKAGTVTGLLECRKRDEAKLMKT
LITDVRVDSALSLPPGLAASVLFLCVRQADCSGDEIRARSLCTAAVTAMKGALKKHCNDV
DMTALWLKNACLLNDLLTQHSKQNEDLVPLTSDLSELNRALSALCIQAYQQLLYISETRL
QPIIVPAMLESEMIPGLSGSGVKLGNFRKRAGSDPRAVERNARETPSMAAVLRELGALHT
ALSRQALPPTLMEQAFRQLTHLLSASALNSLLLRKDMCSWSRGLQIRYNVSLLEEWLRTR
GLQAGGAVALLEPLIQAAQLLQVGKKTDADAQALVHTCTALSTQQIVKILTLYTPHSDLE
ERVTLNFIRTVQGLLKERSDGQSPQLLMDVRRVFPVTFPSLLPPPVRADQLDIPDTLKIS
FLRRP
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgattggaactatggagttgtacgccaagggtgccagtgtgtgggtacctgacccagag
gcagtgtgggtatcagccaagctcctcaaggactacaaccttggagatgagaatgtggtg
ctgcagatcagcgatggcagggaggtgcagtacccagttgcgtcaccctctggcctcccc
cctctggcgaaccctgatattctggagggggagaatgacctcactgctctcagcttcctg
cacgagcctgctgttctacacaacctgagagtccgattcctggactacagcagcatctac
acctactgtgggattgtgttggtggccctcaacccatatgaccagctgcccatctatgga
gaggaagtgatcgatgcctacagtgggcaggacatggctgacatggagcctcacatcttc
tctgtggcagaagaggcctaccgcaccatgaccagggaggagaagaaccagtccattata
atcagtggggaatctggagcagggaaaacagtctctgctaagttcaccatgcgctacttt
gctgtggtggggggagcagcccagcagaccagtgtggaggagagagtactggcctccaac
cctatcatggagtccattgggaatgctaagactacacgcaatgacaacagtagccggttt
gggaagtacattgagatcggcttcggacggaagggggacatcatcggggccaacatgagg
acgtacctgctggagaagtctcgagtcgtcttccaggcgtcacaggagagaaactaccac
atcttctaccagctgtgtgcttctagagacctgccagagatgagagtcctcaaactgggt
ggtgcggaaacgttccgctacacgaaccaaggaggggaagattccatgcagatcccaggc
actgatgatgtggtagatctggagcgcactcgcaatgctttcaccattctaggtgtgcct
ccggaccagcagatggagctcttcaggatccttgcagctgttctgcacctgggcaacgtc
aacatccaggccagtgggagaggtggtgatcgaagttacattgatggggaggagcgttcc
ctgtcggtgttctccaagctgctgggggtggagaggacccagatggcccactggctgtgc
caccgcaggctgaccgtagggggagagctgctggtcaagcccatgcctggtcagcagtcc
ctagaggcccgggatgccctggccaagcatgtgtacggtcagctgttcacctggacagtg
acccggctcaactcagccctccgagcccagagcgagaagcccaagtcatttattggggtg
ctggacatctatgggtttgagacatttgaaaggaacagttttgaacagttctgtataaat
tacgccaatgagaaattgcagcagcaattcaacaggcacgtgttccagttggagcaggag
gagtatgtccgtgaggagctgccgtggagcaggatagagttcagtgataaccagccgtgc
atcgctctcatcgagggacagctgggcctgctcgacctgctggatgaggagtgcaggatg
cccaaaggttcagaggagagctgggctaggaagctgtatgatcagcatcagagtaacaac
cccagtccacacttccgcaaacctcgaatgtccaacactgccttcatcatcctgcacttt
gctgacatggtccaatatgaatgtgatgggtttttagacaagaaccgggatacagttttt
gaggaacccatcaacatcctaagagccagtcagtctgagctggtgtctgagctgttccag
cagaagccagtagggggcagtctgtccctctcagaggggaagtcctctttgtccaatggc
agtctgcgctctggccctgggatgagagctcagcgggaacacaaactcactgtgggcttc
cagttccgtcagtctctgcagctgctgatggacactctgaacagcaccaccccccactac
atccgctgtattaagcccaatgacctcaaagagccttttatgtttgaccctaaaagggcc
gtccagcagctgcgagcctgtggggtgctagagaccatacgcatcagtgctgcaggctac
ccatccaggtggacttatgcagagttcttcagccggtaccgggtgctgctgcgcgggggt
ggggttcagactcaggaacagatccaggcgttgtgccagagggccctgccggagctcatt
ccagacccggagcagtattgctttgggaagaccaaggtgttcttccgtgctgggcaggtg
gctctgctggagaggctgagggcagagagactgagggcggccggggtggtcatccagagc
tgggtcagaggctggctgggccgccggcgatacatcaagacacgctgggcaacactcacc
atccagagatacacaagaggagccctggctaggcggctggcagaccttctgcgctacacc
aaggcagcgctgatcatccagaagacataccgtatggtggcgataagacagatgtttctg
atgatccgcgaggccaccgtcaccatccaggctttcaccaggggctcgctggcacgacgc
caatacagacgggtgttggcagagcgggctgcggtgttgctccagtctgcagtgcgtggc
tggctggcccgccttgcttacaggagggtgagggccgccatagtgttgatgcagtgttgt
gtgaggcggcgggctgccaggagggagctgctgaagctgaaggcagaggctcgctcagtg
gagaagttcagagaactcaacaagggcatggaggtcaaactgatgcagctgcagctcagg
gccgaccagaaggccagggagagcggtgctctgagagagaccctccaggcggagcgtaag
gcccacaacactgagctggacaccctgcggggggcgctagttaagctggagtaccagtta
gagacccagctccagactcagcagtctcagcccagcaccgccatcacagaggaggagacg
gaggagaggaggagggcagaggagaaagcagcccaggagatcctacgactcacacaggag
gtgcaggccctgcgggttgagagggattgtttggggaaagagaaggaggatctgaccact
cgattactggagcaggagacagctcaggaggagagtgtagtacaggctgtggctcaggaa
ggtaaagctctgacagcagagctggatgaggagaggaggaagtaccagggtctgctcaga
gagttcaccaggctggagcagagatatgaaaacctacgggaaatgagcatgctcactgag
cactctaagggctacagacggacagattcaaaccaaagcctgatcatggagcccccatct
ccttccccgatgtcgccgcccttttccgggccccctaccttcccagccacaccttccttc
ttcggcccccctcccttcccctctccggaggaggtgaggagggttagtgtgacgtccccc
accgcagagaggagggcctggcttaactctgacacactcatggacacgttgatggagaat
atgggtgtggctaaagactcagccgggaagatgaccggagaagacctgtggcacgcctat
gatgctgtacgagtggccaacaagttcctggagaaccagctgcgtagccagcgctctcag
gaggaggcggagctggaggctctgcggctgcaggctaaacggacgtgctctgatccctcc
ccctctgcagaccagcagtacctggtgggactggtggaagccagggagcaggaggtctgc
agactgaggagagaactgaaggagctgagacacacagtcacactcagaagactactggca
cagacaggcccagtgctttcccagtccacagaggattcctctgccccccataccaaagct
gggactgtcacagggctgctggagtgtaggaagagggatgaggccaagctcatgaagact
ctcatcacagacgtgagggtggacagtgccctctccctgccccctggcctggctgctagt
gtgctgttcctgtgtgtacgccaggcagactgtagcggagatgaaatccgcgcccgctct
ctctgcactgctgctgtcactgccatgaagggggctctgaaaaaacactgtaatgatgtg
gacatgacagcactgtggctgaaaaatgcctgccttctcaatgacctactgacccagcac
tccaaacagaatgaggatttggttccgttgacctctgacctgagtgagttaaaccgtgct
ctgagtgccctctgtatccaggcctatcagcagctcctgtacatctcagaaacccgcctg
cagcccatcattgttcctgccatgctggagagtgagatgatcccaggactgtctgggtcg
ggggtgaagctggggaactttaggaagcgtgcggggtctgatcccagggctgtagagagg
aatgcacgggagaccccgagtatggctgcagtgctgagggagctgggtgccctccacacg
gccctgtcccgccaggccctaccccccaccctgatggagcaggccttccgtcagctcacc
cacctcctttctgcctctgccctcaacagcctgctgctacgcaaggacatgtgtagctgg
agccgaggcttgcagatacggtataatgtgagtctgctggaggagtggctgcggacccgt
gggctgcaggcagggggagctgtggccctgttggagcctctcatccaggccgctcagctc
ctgcaagtgggcaagaagacagacgctgacgcacaggccctcgttcacacctgcactgcc
ctgtctacccagcagattgtgaagattctgaccctgtacacccctcacagtgacctagag
gagagggtgacactcaattttatccgcacagtgcagggtctgctgaaggagcgttcagac
ggtcagtctccacagctgctgatggatgtacggcgtgtgttccccgtcaccttcccctcc
ctgctgcccccgcctgtccgcgctgaccagctggacatcccagacaccctcaaaatctcc
ttcctacgacggccttag
DBGET
integrated database retrieval system
