Oncorhynchus gorbuscha (pink salmon): 123997161
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Entry
123997161 CDS
T07892
Name
(RefSeq) cystathionine gamma-lyase-like
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo00260
Glycine, serine and threonine metabolism
ogo00270
Cysteine and methionine metabolism
ogo00450
Selenocompound metabolism
ogo00670
One carbon pool by folate
ogo01100
Metabolic pathways
ogo01230
Biosynthesis of amino acids
Module
ogo_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
123997161
00270 Cysteine and methionine metabolism
123997161
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
123997161
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
123997161
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogo04147
]
123997161
Enzymes [BR:
ogo01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
123997161
Exosome [BR:
ogo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
123997161
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Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Met_gamma_lyase
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
123997161
NCBI-ProteinID:
XP_046157230
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All DBs
Position
LG15:complement(42102075..42108755)
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AA seq
427 aa
AA seq
DB search
MSIQRKNIATHHSQGTGLDLQHMASSHHQNDLSTGFHPQFKSFATEAIHVGQEPEQWKSM
AVVPPISLSTTFKQYRPGDHAGFEYSRSGNPTRNCLEKAVAALDGAKHCLALASGLAATM
TISHMLKAGDGIVCMNDVYGGTNRYFRKIAAEVGLVVSFADCTKIDLLQAALKPNTKLVW
IETPTNPTMKVVDIQACADVVHQHNPNTVVVVDNTFMSAYFQRPLALGADICMYSATKYM
NGHSDVVMGLVSVNREDLYDRLRFLQNALGAVPSPFDCYLCNRGLKTLHLRMRQHFKNAL
AAAKFLEADPRVDRVIFPGLPSHPQHELMKKQCTGCPGMITFYIKGKLENATMFLSNLKL
FALAESLGGYESLAEHPAIMTHASVPESDRAALGISDTMVRLSVGLEDEQDIIEDLEQAL
NAAHPKK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgagtattcaacggaaaaacatagcgacacatcactctcagggaaccggactggatttg
caacacatggcttcttcacaccatcaaaacgacttgtccaccggtttccacccgcagttc
aaatctttcgcaacagaggcgatccacgttgggcaagaaccggagcaatggaaatctatg
gccgtggtaccacctatttctctgtccaccacgttcaagcagtatagacctggagatcat
gctggttttgagtacagtcggagtggaaacccgaccagaaactgcctggagaaagctgtt
gctgctctggatggagcgaaacactgtcttgctctcgcctctgggctggctgcgactatg
accatctctcacatgctgaaagctggagatggcattgtctgcatgaacgatgtgtatgga
ggtaccaatcgttatttccgaaagattgctgcagaagttggcttggttgtgtcctttgct
gattgcaccaaaatcgatttgctccaggctgctcttaagccaaacacaaaattggtatgg
atcgagacccccaccaaccccaccatgaaagtggtggatatccaggcctgtgcagatgtg
gtccaccaacacaaccctaataccgtggtggttgtggacaacactttcatgtcagcctac
ttccagcgccccctggccctcggcgcggacatatgcatgtattccgctactaagtacatg
aatggtcacagtgacgttgtaatgggcctggtgtctgtgaaccgggaggacctgtatgac
cgactgaggtttctacagaacgccctcggagcggtgccgtccccctttgactgctacctg
tgtaaccgcggcctgaaaaccctgcacctgcgcatgaggcagcacttcaagaacgccctg
gcagcggccaagttcctggaggccgaccccagggtggaccgagtcatcttcccaggcttg
ccctcccacccccagcacgagctgatgaagaaacagtgcacaggctgcccagggatgatc
accttctacataaagggaaaactggagaacgccaccatgttcctcagcaacttaaagtta
tttgcacttgccgagagcctcggtggttatgaaagcttggcagagcatccggcgataatg
acccatgcgtctgttcctgagagtgatagggcggcccttgggatcagtgacacaatggtc
cgtctgtctgtggggctggaagacgagcaggacatcattgaggacctggaacaagccctg
aacgccgctcatccaaagaagtaa
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