Oncorhynchus gorbuscha (pink salmon): 123997340
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Entry
123997340 CDS
T07892
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D-like
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04020
Calcium signaling pathway
ogo04080
Neuroactive ligand-receptor interaction
ogo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
123997340
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
123997340
04082 Neuroactive ligand signaling
123997340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogo04040
]
123997340
Ion channels [BR:
ogo04040
]
Ligand-gated channels
Glutamate (ionotropic)
123997340
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GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
NMDAR2_C
Motif
Other DBs
NCBI-GeneID:
123997340
NCBI-ProteinID:
XP_046157434
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All DBs
Position
LG15:complement(79056321..79212972)
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AA seq
1321 aa
AA seq
DB search
MVAISTLSLLLALAEWAGLVTPSPHLLLRPRERERDPGTVMNFNIAVIHAGASVQVEAAA
GPGGRVLYPGFGRAHSSLGESVITQWGSANVIWLQVNDSSPKTLLSQLCDLLSARPLQGL
VYEEERPPPTAWGPLAPMLEFVSAQTGLPIVAVGGGAGLGRMQQESGSIFLQFSSSTSLQ
LEVIFKILEEYDWTTFSVVSTRHHGYQDFLSVVDGLTDGSFIGWEKKSVVMLNVTDDPGG
ARTRRLLKENEAQVRLLYCSQEEAELVFKAAWAAGQAGPSHMWFAVGPALSGLGMEGLPR
ALFAVRPQGWKDKPRMRIARGVSILTHGAVALRRDYGASGGPNFVTNCMTESNQTHRVRG
RMRYFSNITLGGRDYSFDSDGYLANPVLEVISYTPGKGWEDVGMWENGKLDLVYPAWSRY
GPFLQPPDGAQHLRVVTLEERPFVIVELADAASNTCIRDSVPCRRPLNASIPVQDPPKKQ
CCKGFCIDILKRLAKIVGFTYDLYLVTNGKHGKKIDGVWNGMIGEVVGQRADMAIGSLTI
NEERSEVVDFSVPFVETGISVMVSRSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVF
IFEFFSPVGYNRSLSSGKKAGGSTFTIGKSVWLLWAIVFNNSVPVENPRGTTSKIMVLIW
AFFAVIFLASYTANLAAFMIQEEYIDTVSGLSDKKFQHPTEQYPPLKFGTVPNGSTEKNI
RSNYPGMHHYMVKYNQRGVEDAINNLKTGKLDAFIYDAAVLNYMARKDEGCKVMTIGSGK
VFATTGYGIALHKNSRWKRPLDLALLQLVGDDEIEMLERLWLSGICHNDKIEVMSSKLDI
DNMAGVFYMLLVAMGLSLLVFAWEHLVYWRLRHCMATSSGRLDFLLAISRGMYSCCSFED
ETTPGGAKSSMAMLPHHHGTMATVPPPPHLVGASSTNPALTMAQQQQQQQSQPVYKTQLP
GSPPTVVHSGTALGPSNTPMLGAPLPCSTFLPRPDRRLAVVDRWRLPKAGTPTNPMAVRG
TVADMGPFPQKAPPTWGTTAGGVGVGGGGGLDGYKRYYGPIDPEGLGPCMDQPAGSQTPK
TAPRSHPQPPPATVAFYSEKGPDQGVGRRVVGGGGAGCQGKGGVKPLGTPRLPPKSQAVG
VTPVPLPTNPPLPQPSPPLPSSFWRKRRPKKPKEPGGPLYENILPLGRRGGGRDGSTREG
LDAEDDDEDEELTEESRRSHGHGKRGSTALSHSQEELLPHCHSFSGGSRPKPPPKQDQGQ
AKSGSQASLSTQQPGVAKLLYQRLRSVPQPGRFYSPHLPLKAKSLCSRRGSAHFSSLESE
V
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atggttgcaatatccaccctctctctcctattggccctggcggagtgggcaggactggtc
acaccctccccacacctcttgctccgcccccgggagcgggagagagacccggggactgta
atgaacttcaacatcgctgtgatccacgcgggggccagcgtgcaggtagaggcggcggcc
gggcccgggggaagggtgctctaccctgggtttggtcgggcacacagctccctgggggag
agcgtgatcacccagtggggctctgcaaacgtcatctggctccaggtgaatgacagtagt
cctaagactctgctgtcccagctgtgtgacctgctgtcagcgaggcccctacagggcctg
gtctacgaggaggagaggccaccacccaccgcctggggacccctggcccccatgctagag
tttgtctctgcccagactggactacccatagtggctgtaggaggaggagcagggctgggg
aggatgcaacaggagtcaggctccatcttcctccagttcagctcatccaccagcctccag
ctggaggtcatcttcaaaatactagaggagtacgactggaccaccttctcagtggtgtcc
acccgtcaccatggctaccaggacttcctgtcggtggtggacggcctgacggacggctcg
ttcatcggctgggagaagaagagcgtggtcatgctgaacgtgacggacgacccgggaggg
gcacgcacgcgtaggctgctcaaggagaacgaggcgcaggtacgtctgctctactgttcc
caggaggaggccgagctggtgtttaaagcagcctgggccgcgggtcaggctggaccctct
cacatgtggttcgctgtggggccagccctgtccggccttggcatggagggtctccccagg
gccctgttcgccgtgcgtccgcagggctggaaggacaagccccgcatgaggatcgcccgg
ggcgtgtccatactgacccatggggcggtggcactgcgccgcgactatggggcctctgga
gggccaaactttgtcaccaactgcatgacggaatccaatcaaacacacagggtgcggggg
aggatgaggtatttcagcaacatcactttgggtggcagagactactctttcgacagtgac
ggttacctggccaaccccgtcctagaagtcatctcctatacacctggcaaaggctgggag
gatgtagggatgtgggagaacggtaagttggatttggtttatccagcgtggtcgcgttac
ggtccattcctccaaccgcctgatggcgcccagcacctgcgcgtggtcactctggaggaa
cgtccgtttgtcatcgtggagctggctgacgccgcctccaacacctgcatcagagactct
gtaccctgccgacgacccctcaacgccagtattcctgtccaggatcccccaaagaaacag
tgctgtaagggcttctgcatcgacatcctcaaacgattggccaagatcgtgggtttcacc
tatgacctctacctggtgaccaatggaaagcacgggaagaagattgatggagtgtggaac
ggcatgattggagaggtggtgggacagcgagcagatatggccatcggatccctcaccatc
aacgaggagaggtcagaggtcgtggacttctccgtccccttcgtggagacgggcatcagc
gtcatggtctcccgtagcaatggaaccgtctcaccctctgccttcctggagccctacagt
ccagcggtgtgggtgatgatgttcgtcatgtgcctgaccgtggtggctgtgaccgtcttc
atatttgagttcttcagtccagtcggctacaaccgcagcctttccagcggaaagaaggca
ggaggctctacgttcaccataggaaagtctgtgtggttgctgtgggccattgtgttcaat
aactcggtcccagtggagaaccccagaggaaccaccagtaagatcatggtgctgatctgg
gccttcttcgctgtcatcttcctggcttcctacacagccaacctggctgccttcatgatc
caggaggagtacatagacactgtctctggactctcagacaaaaagttccagcaccccaca
gagcagtacccccctctgaagtttggcacggtgcccaatggaagtacagagaagaacatc
cgcagtaactaccctggcatgcaccattacatggtcaaatataaccagagaggggtggag
gacgccattaacaacctcaagactgggaagttggatgcctttatctacgatgcagctgtg
ttgaactacatggccaggaaagacgagggttgtaaggtgatgaccataggctctgggaag
gtatttgccaccacaggctacggtatcgccctgcacaagaactcccgctggaaacgcccc
ctcgacctggccctgctgcagctggtgggagacgatgagattgagatgctggagcgtctg
tggctgtctggtatctgtcacaatgataagattgaggtgatgagcagtaagctggacata
gacaacatggcgggtgtcttctacatgctgctggtggctatggggctcagtctgctggta
tttgcctgggagcacctggtctactggaggctcagacactgcatggctaccagctccggg
agactggacttcctactggccatcagtaggggcatgtacagttgttgtagctttgaggat
gaaaccacgccgggtggggccaaatcctccatggctatgctcccccaccatcatggcacc
atggcaacagtcccgcccccgccacacttggtcggtgcgtcgtcaaccaacccggccctg
accatggcgcagcagcaacagcagcaacagtcacagcccgtctacaaaacacaactacct
ggatcccctcccactgtggtgcattctggaactgcgctggggccctccaacactcccatg
ctgggggcgcccctgccctgctccacattcctcccccggcctgatcgcagactggccgtg
gtggaccgctggaggctgcccaaggctgggacccccaccaaccccatggccgtgcgcggg
accgtcgcagacatgggacccttcccccagaaggcgcctccgacctggggcacgacagct
ggaggagtgggagttggtggtggtggggggctggatggatataaacgctactatggaccc
atcgaccctgagggtctggggccctgtatggaccagccggcagggtcccagacccccaaa
acagcccccagaagccaccctcaaccccctcccgccactgtggccttctactcagagaaa
ggtcctgaccagggggtggggaggagggtggtgggaggtggtggtgctgggtgtcagggg
aagggaggggtcaaacctttggggacgcctcggctacctcctaaaagccaagccgtgggc
gtgaccccagtccctctgcccactaaccccccgctgccacaaccctccccccctctcccc
tcatccttttggaggaagcgccggcccaagaagcccaaagagccaggcgggcctctgtac
gagaacatcctaccgctggggcgcaggggaggaggaagggatggaagcacgcgggaaggt
ttggacgcagaggacgatgatgaggatgaggagctgaccgaggagtccaggcggtcacac
ggccatgggaagagaggcagcacggccctgtcccacagccaggaggagctgctcccccac
tgccacagcttcagcgggggctcacggcccaaaccccctcccaaacaagaccagggccag
gccaagtcaggcagccaggccagcctcagcacacagcagccaggagttgctaagctcctg
taccagagactacggtcagttcctcagcccggacgcttctactccccccacctgccactc
aaggccaagagcctatgctcccgacgaggctccgcccatttctccagcctggagagcgag
gtatga
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