Oncorhynchus gorbuscha (pink salmon): 123997344
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Entry
123997344 CDS
T07892
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic-like
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
123997344
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ogo01007
]
123997344
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ogo03016
]
123997344
Enzymes [BR:
ogo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
123997344
Amino acid related enzymes [BR:
ogo01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
123997344
Transfer RNA biogenesis [BR:
ogo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
123997344
Prokaryotic type
123997344
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
Motif
Other DBs
NCBI-GeneID:
123997344
NCBI-ProteinID:
XP_046157438
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All DBs
Position
LG15:80675553..80690722
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AA seq
702 aa
AA seq
DB search
MLVTMMLRFPVCRPSVRAVLHRQRRFSKIQASPALSERVRVFESLSERQGQQRTSGATKQ
AFSVRLADGRTMNGTTGVTTPSIIAQNARVKGALVCRVNGELWELLRPLEADCELQLLGF
NTTEGKQAVWRTGACVVGWVLERVFGVDMCREGVSESGLYCDHLPENSALSLAELEERCK
EAAGQRQRLSPHLLAPLSRLELNRQEVTEVFQDNALRLQLIEEQMSGPTVTVYRCGDSIG
VCNGPLLPNTGLLKVFKMLQVSPVTLTNPVGTSGVMRVMGVAFPGEREREEWEREQEETR
KRDHRRIGKDQELFFFNDVSPGSCFFLPKGAHIYNTLADFIKTEYRRRGFHEVVTPTLYS
TALWERSGHWEHYSENMFTVTGDTHTYALKPMNCPAHCLMFEQRVRSWRELPLRWADFGA
LHRNELSGALGGLTRVRRFCQDDAHIFCTPEQLEEEIIACLDFVRSVYRVFGFSFHCLLS
TRPTPCLGEPALWDHAEQQLERSLQQFGERWQFNPGDGAFYGPKIDIQIKDAIGRQHQCA
TIQLDFQLPIRFDLEYVGGDGETHRPVMIHRAVLGSLERMIAILAENFGGKWPLWLSPAQ
VMIIPVGGSDVCFALVKVVRQFREAGFMADADDDQGATLNKKIRSAQLAQYNYIFVVGEK
ECVGGTVSVRTRGGKQLGRRPTEKVLASLTHLRDARSNQDDF
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtaaccatgatgttacggtttcccgtctgtcggccgtcagttcgggcagtgctt
caccgtcagaggcgctttagcaagatacaggcatcccctgctctgtctgagcgtgtgcgt
gtgtttgagtctctcagtgagaggcagggacagcagaggacaagcggcgccacgaaacag
gccttcagcgtccgattggctgatggcaggacgatgaatggcaccacaggtgtgaccacg
ccgtcaatcatcgctcaaaacgcacgtgtgaaaggtgctctggtctgcagggtgaatgga
gagctgtgggagctgcttcgccccctagaggctgactgtgaactacagctgctaggcttc
aacaccacagagggcaaacaggcggtgtggaggacaggagcgtgtgttgtggggtgggtg
ttagagagggtgtttggggtggatatgtgcagagagggtgtgtcagagtccggcctctac
tgtgaccacctcccggagaacagtgccctgtccctagctgagctagaggagagatgtaag
gaggccgctggccagaggcagaggctatcccctcaccttttggcacctctctccagactg
gagctgaacaggcaggaagttacagaggtcttccaggacaatgctctgagactccagttg
attgaagaacagatgagtggtcctactgtcacagtctacaggtgtggagacagcatagga
gtctgcaatggtcctctcctccctaacactggtctcctcaaggtcttcaagatgctgcag
gtgtctcctgtaacgttgaccaatcctgttggcacgtcaggcgtgatgcgtgtgatgggt
gtggccttcccaggagagagggagagggaggagtgggagagggaacaggaggagacacgg
aagagagaccacagacgcatcggcaaggaccaggagctgttcttctttaatgacgtcagt
cctggaagctgcttcttcctgcctaaaggagctcacatctacaacacactcgctgacttt
atcaagactgagtacaggaggcgtggcttccatgaggttgtgacccctactctatacagc
actgcactgtgggagcgttcaggtcactgggaacactacagtgaaaacatgtttactgtg
accggtgacacacacacctatgcactcaaacccatgaactgtcctgcacactgtctgatg
tttgagcagcgtgtaaggtcatggagggagctcccgttgcgttgggccgatttcggggca
ctgcatcggaacgagctgtccggcgctctgggtggtctcacccgggtccgcaggttctgc
caggatgacgcacacatcttctgcactcctgagcagttggaggaggagatcatagcgtgt
ttggactttgtgaggagtgtgtatcgagtatttggattctccttccactgtctcctctcc
acccgacctacaccctgcctgggggagcctgcactgtgggaccacgctgagcagcagttg
gagagaagtctgcagcagtttggagagcgctggcagttcaacccaggagatggagcattc
tacgggccaaagattgatatccagatcaaggacgccattggtcgacagcaccagtgtgcc
accatccaattggacttccagctaccaatcagatttgacctggagtatgtggggggggat
ggagagacccacagaccagtgatgatccacagagctgttctgggatcactggaacgcatg
atcgctatattggctgagaattttggggggaaatggcctctgtggttatctccagcgcag
gtcatgattattcctgtaggggggagtgatgtgtgttttgctcttgttaaggtggtccga
cagttccgcgaggctggcttcatggctgacgcggatgatgaccagggtgccaccttaaat
aagaagatccgctctgcacagctggcccagtacaactacatatttgtggtaggtgagaag
gagtgtgtgggtggcacggtgagtgtaaggaccagaggggggaagcagctagggaggaga
ccgacagagaaggtcctggcatcactcacacacctacgagacgcacggagcaaccaggat
gacttctaa
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