Oncorhynchus gorbuscha (pink salmon): 123997417
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Entry
123997417 CDS
T07892
Name
(RefSeq) nuclear speckle splicing regulatory protein 1-like isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
123997417
Membrane trafficking [BR:
ogo04131
]
Autophagy
Other autophagy associated proteins
Others
123997417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
123997417
NCBI-ProteinID:
XP_046157567
LinkDB
All DBs
Position
LG15:complement(47866926..47903814)
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AA seq
655 aa
AA seq
DB search
MAEFPIDQNKLPGVKEVCRDFAVLEDHCLAHNLQEQEIESHLASNVHKSRLVQQDVALAK
QLQEEEDRRAQAKAKRQHRDIERSDNEIAQEIQEELVRQAEQQRKQEEKDAAIARKLQEK
EMKEERKRQKQLEANFEEEYYEDKGATRAPLDLDDKPRRPGSNSHSPESHPLTPGSQRDL
SPEYVSFEPSRTRYPPYDSVEPSTSGRSRSPEHHLECRGGGSRVKHGDPYPEDHLSNSRG
KRGGSYPDYHHSEGRSKGKGDQRGRDPQGSQSTFYPDSREPRRHREERGDEGERVVRRKE
RPSRPPPQSHNPVERDEAWERKRECEKDRQREPRRDEERERDAPRHEERSRGGQRHGLRS
HDQEHGRDKHREKDRRRERTKSRERGLDEDYYESIPSSRAWTVGGVEGPGDEGGPMARLH
SGPSELCEEEEARRSPRPGVMRGERRGHRDPGEGPSMGTERSYTHPAPREPGRIVQGGPG
GRGAVVVGGEYGMGEATQGIAQLDLREQEILDMEVARKLQEEEVKASKMDKRAAQVAQDE
EIARLLMEQEKKEYKKSKEKEKQGMRPEERGMRLEERRRPEGGDFKPNSEEVVRPRSREE
EYQRHRNHQKPARPPQPLPHDYENVETSYSYSESHYSSRTPARPEAAYKGTYYRQ
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtttcccatcgatcaaaacaaactgcctggagtaaaagaagtgtgtcgagac
tttgctgtgctggaggaccactgcctggcccataatctccaggagcaggaaatcgagagc
cacttggcatccaacgtccacaagagccgtctggtgcagcaggacgtagcgttggccaag
cagctgcaggaggaggaggaccggagggcccaggccaaggccaagagacaacaccgggac
atagagcgcagcgacaatgagattgcccaggagatacaggaggaattggttcgacaggcg
gagcagcagcgcaagcaggaggagaaggatgcggccatcgctcgtaagctgcaggagaag
gagatgaaagaggagaggaaacgacagaagcagctggaggccaactttgaggaggagtac
tacgaggataaaggagccaccagagcccctctggacctggatgacaaacccaggcgacct
ggttcaaactcccactcccccgagtcgcatccccttaccccaggctcacaacgcgacctc
tctcccgagtacgtttcttttgagcctagcaggaccagataccccccatacgactctgtg
gagcctagcaccagtggacgttccaggtcccccgagcaccatttagagtgtagaggaggg
ggtagtagggtcaagcatggagacccataccccgaggatcacctctccaatagcaggggg
aaacgtgggggcagttacccagactaccaccactccgagggtagaagtaaagggaagggg
gaccagaggggccgagacccccaggggtcccagtccaccttctacccagacagccgtgag
cccaggagacacagagaggagagaggggatgagggagagcgggtggtgaggaggaaggag
aggcccagccggccgcccccgcagtcccacaaccctgtggagagagacgaggcttgggag
agaaaaagagagtgtgagaaagatcggcaaagagaacccaggagagacgaggagagggag
agagacgcaccaagacacgaggagagatcgcgaggcggacagagacatgggctgcgatcg
cacgaccaagagcatggccgagacaaacacagagaaaaagacagacgccgagagagaacc
aagagcagagagcgaggtcttgatgaagactattacgagtccatacccagcagccgggcc
tggactgttggtggggtggagggccctggggatgagggggggcccatggccaggctccac
tctggccccagtgagctgtgtgaggaggaggaggccagaaggagcccccgccccggcgtg
atgaggggggagaggagaggtcacagggaccctggggaggggcccagcatgggcacggag
cgctcctacacgcaccccgctcctagggagccaggtcgtatcgtgcaagggggaccaggg
ggtcgcggcgcagtggtggtaggaggagagtacgggatgggcgaggccacccagggcatc
gcccagctggacctgagggagcaggagatcctggacatggaggtggcccggaaactacag
gaggaagaggtcaaggcgagcaagatggacaagcgcgcagcccaagtggctcaggatgag
gagatagcccggctgctgatggagcaggagaagaaggagtacaagaagtccaaggagaag
gagaagcaggggatgaggccggaagagagggggatgaggctggaagagaggaggcggcca
gagggaggagacttcaagcccaactcagaggaggtagtgcgtcccaggtcccgagaggag
gagtatcagaggcacaggaaccaccaaaagcctgccagacctcctcaacctcttccacat
gactatgagaatgtggagaccagctacagctactccgagagccactactcttcccgcact
ccagccagacctgaggctgcttacaaaggtacctattacaggcagtga
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