KEGG   Oncorhynchus gorbuscha (pink salmon): 123997424
Entry
123997424         CDS       T07892                                 
Name
(RefSeq) lysine-specific demethylase 4B-like isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ogo03036]
    123997424
Enzymes [BR:ogo01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     123997424
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     123997424
Chromosome and associated proteins [BR:ogo03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    123997424
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD DUF4537 Agenet Tudor_5
Other DBs
NCBI-GeneID: 123997424
NCBI-ProteinID: XP_046157586
LinkDB
Position
LG15:48352264..48437501
AA seq 1190 aa
MSLTVPPDPTATMSLEASTPAPDLAPAPDLAPAPDLAPAPDLVPDPAPDLAPELTPDSAQ
APELASDPAPTPAPPVPVMNPGCKIMTFRPTMEEFKDFAKYVAYMETQGAHRAGLAKVIP
PKGWKPRQSYNTIEEMVIPAPIMQVVTGQSGLFTQYNIQKKSMTVGEYRQLANSRTYCTP
RHKDFDDLERKYWKNLTFVSPIYGADVSGSIYDPEIGEWNIGHLNTLLDMVEQECGIVIE
GVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAQGFFPG
SSQGCDAFLRHKMTLISPSILKKYSIPFDRITQEEGEFMVTFPYGYHAGFNHGFNCAEST
NFATLRWIDYGKMATQCTCRKDMVKISMDVFVRCLQPERYEQWKQGKDGTVLDHQRPTTL
NSPELEHWRANRVTYREKLLQRALQKKEQLRRLKLEEVKVLAEEGIELDAVAYQRQVEER
EAQRRQDREERMAREALETLEAMDREDRERQEALAAQAARGLPDPQVDPQHLMANGEKKK
KKKKKKKQPALPSDPMNSFQAAFEKFATFKIPQTPKQPKGSNDTDLPAEGKLDVNGMQQS
SSYSKQLKMRMEVKKSRRHPLSKPPMRSPLSIVKQETSSDEELFSPWPLDGDVKKAGHLW
QNRTPNFLAEKGFNAAVATLEPYCAVCTLFCPYTQKDSSYPTDSPGAPNHHSVSRCGSRT
HPLVPEMCFSAGAGNTEPPPSNSHTGDDGTSPLLSCSSCSLQVHSSCYGVRPETVHNGAW
MCLRCTALAWTADCCLCNLRGGALKMTTDNRWVHVICAIAVAEARFVNAVEREPVDISAI
PENRKSLKCVYCHKITKQMCGACIQCSHDSCSTSFHVTCAHIAGVLMKPADWPYVVSVTC
HKHKKTNHKARAGPRGEFSLGQKVIGRNRDGWFYPCTIIGMASHTFYEVNYDDGSYCDNL
FPENIVSHDCLRNGPPEMGELMLVHTAEGKALNASYVRDHVHKHYQVEFQDESQLLLKQT
EIHSLEQDLPKRVCARLAIPTQEGIMSGDEPQAAKRPRLPAPHPPPQALMDSTQQHLGRH
PPATAPAPHSITLTNLSHVPAPHNTDISAPTLTQALAIPIPEPTLNPMPALPDPCLADHL
PAAPLLPLSPDMPSQHQGEVYTPSSSYVSYMETLLNAHFPPQEKGPGPLF
NT seq 3573 nt   +upstreamnt  +downstreamnt
atgtcattgacagtgcccccagatccaactgccaccatgtcgctggaagcgtcaacccca
gcgccagacctagccccagcgccagacctagccccagcaccagacctagccccagcacca
gacctggtcccagatccagccccagacctagctcctgaattaaccccagattcagctcaa
gccccagagctagcctcagatccagcccctaccccagctcctccagtcccagtcatgaac
ccggggtgtaagatcatgaccttccggccaaccatggaggaattcaaggactttgccaaa
tacgttgcctatatggagactcaaggagcacaccgtgcaggcctggcaaaggtgattcct
cctaagggctggaagccgcggcagtcgtacaacaccatcgaggagatggtgatccctgct
cccatcatgcaggtggtgacgggccagtcgggcctcttcacccagtacaacatccagaag
aagtccatgaccgtcggggagtaccgtcaactggccaacagcagaacgtactgtactccc
cgacacaaggactttgacgacctggagaggaaatactggaagaacctcacctttgtttcg
cccatctacggagccgacgtcagcggctccatctacgacccggagatcggtgagtggaac
atcggccacctgaacacgctgctggacatggtggagcaggagtgtggcatcgtgatcgag
ggggtgaacacgccctacctgtactttggcatgtggaagaccaccttcgcctggcacaca
gaggacatggatctctacagtatcaactacctccactttggagagcccaagtcatggtac
tccgtcccacctgagcacggcaagaggctggagagactggcgcaaggtttcttcccaggc
agttcccagggctgtgacgccttcctccgccacaagatgactctcatctccccatccata
ttgaagaagtacagcatccccttcgacaggatcactcaggaagaaggcgagttcatggtc
acctttccctacggctaccacgccggtttcaaccacggcttcaactgcgccgagtccacc
aactttgccaccctgcgctggatcgactacggcaagatggcaacgcagtgtacgtgtcgt
aaggacatggtgaagatctccatggacgtgtttgtacgctgcctgcagcccgagcgctat
gagcagtggaaacagggcaaggacggcaccgtgctggaccaccagcgacccaccaccctc
aacagccccgagctggagcactggagggccaaccgggtcacctaccgggagaagctgctc
cagagagctttgcagaagaaggagcagctgcgccggctgaagctggaggaggtcaaggtg
ctggcggaagagggcatcgagctggacgccgtggcctaccagcggcaggtggaggagcgc
gaggcccagcggcggcaggacagggaggagaggatggcccgcgaggccctggagaccctg
gaggccatggatagagaggaccgggagaggcaggaagcccttgccgcccaggccgcaaga
ggcctaccagacccccaggtagacccgcagcacttgatggcgaatggcgagaagaagaag
aagaaaaagaagaagaagaaacaacccgccctgccgtccgaccccatgaactctttccaa
gcagcttttgagaagtttgccacgtttaaaatcccgcagaccccaaagcagcccaaaggc
agcaatgacacagacctaccagcagagggcaagcttgatgtgaacggtatgcagcagtca
tcatcttactccaagcagctgaagatgaggatggaggtgaaaaagagtcgccggcacccc
cttagcaaaccccccatgcgatccccactctccatcgtcaagcaggagacatctagtgac
gaagaacttttctccccctggccactggatggcgacgtgaagaaggcaggccacttgtgg
cagaaccgcacgcccaacttcctggccgagaagggtttcaacgcggccgtggccaccctg
gaaccctactgtgccgtatgcactctgttctgtccgtacacacagaaggactcctcctac
ccgaccgacagtcccggtgcccccaaccaccacagcgtatcccgctgcggcagccgtacc
catccgctggtccccgagatgtgcttcagcgccggggcaggcaacaccgagccgccgccc
tccaactctcacacgggtgacgacggcaccagcccgctgctctcctgctcctcctgcagc
ctgcaggtccactccagttgttatggtgttaggccggaaacggtacacaatggggcctgg
atgtgtttgagatgtacagcgctcgcctggacagcggactgctgtctgtgtaacttacgg
ggaggcgctttgaagatgaccacggacaaccggtgggtccatgtgatctgtgccatcgct
gtggccgaggcccgcttcgtcaacgccgtcgagagggagccggtggacatcagcgccatc
ccagagaacaggaagagtctgaagtgtgtgtactgccataaaatcaccaagcagatgtgt
ggcgcgtgtatccagtgttcccacgacagctgctccacctcctttcatgtcacctgcgct
cacatcgccggcgtgctcatgaagcccgccgattggccctacgtggtgtccgtcacgtgc
cacaagcacaagaagaccaatcacaaggcgagggcggggccaaggggggagttttctctg
ggccagaaggtgattggtcggaaccgcgacggctggttctacccctgcaccatcatcggc
atggcgtcgcacaccttctacgaggttaactatgatgacggctcctactgcgacaactta
ttcccagagaacattgtgagtcatgactgtcttcgtaacggcccgccagagatgggcgag
ctgatgttggtccacaccgcggagggcaaggcgctcaacgcctcctacgtcagggaccac
gtccacaagcactaccaggtggagttccaggatgagtcacagttgttactgaagcaaaca
gagatccactcgctggagcaggacctgcccaaaagggtctgcgcccgcctggcaatacca
acccaggaaggtattatgtcaggagatgaaccacaggcagccaagcggcctcgtctcccc
gctcctcaccccccacctcaagccctcatggactcaacgcagcagcacctcggacgccac
cccccagctacagccccagcacctcacagtattacactcaccaacctcagccatgtgcct
gctccccacaacactgacatcagtgcccctaccctcacacaggctctggcaatacccatc
cccgagcccacccttaacccaatgcccgctctccctgacccctgtctcgctgaccatctc
ccagccgcccccctgctgcccctgtccccagacatgccctcccaacaccagggcgaagtc
tacacgcctagctccagctacgtatcctacatggagactctgctcaatgcacatttcccc
cctcaggaaaagggccccggtcccctgttttaa

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