Oncorhynchus gorbuscha (pink salmon): 123997485
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Entry
123997485 CDS
T07892
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like isoform X1
KO
K03145
transcription elongation factor S-II
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogo03021
]
123997485
Transcription machinery [BR:
ogo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
123997485
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HVO_0758
Motif
Other DBs
NCBI-GeneID:
123997485
NCBI-ProteinID:
XP_046157726
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Position
LG15:complement(52844887..52866309)
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AA seq
781 aa
AA seq
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MTREEELIRIAKKLDKMVSRNNTEGALDLLNELKSFNMTLKLLQETRIGMSVNGIRKHCT
DDEVVSLAKILIKDWKRLLDAARTQSTERPNKMKNGVDSSKSTGSPVRSPLEKDTSHKRL
DVSDSEPESEKEEYSDQRQKEKYNVEHKKDERAVDLKKERYTEAFKNKRHAEQSKNGKHT
EDARKERHVEHLEEPKKERHFKKSRKERHLPIHDTKNERHVQEPKKESNLEEPKNESHTD
EPRKERHTEERRKEIPMYEPPQERPVENHRQGFERRSVLDDLYPSCYSPPRPPRPPRLPP
PVRRMSGEVNKGVKKEVKKERERRDSLDTLSPSHPRPTPPSRRPSVKVKKERKKAPPDPN
SPLPPLHPHPSMPTAAEVKKESNLQPVMKKKEPPRISVVKKEPPDPNAPFAPLPLHLHPP
PPVKRPSVEVKKEREESSDYKPVSLKVTSSDHVKKDRKDSDSKVPKKTSVDAKKERKDLS
DSKPKCSKRQSLDSSDSNPKRSKRPSLDDKKDRKDSTDSKPSHSVKRHSTDSKSDRRDSV
DSKTNSSPSAKKLSSETKEFHSSKSSHPGPLQRKSSTDSIERRGKPEMPKIPTTPTSPMS
PSFSSAGVPLSPCLATGETIRDKCIEMLAAALRTDDNFKEFGTNCDSMAAEIEDHIYTEM
GSTDMKYKNRVRSRISNLKDPKNPGLRRNVLAGGIELRRFAIMSAEEMASDELKQLRNNL
TKEAIREHQLSKTSGTISDLFQCSKCGKKNCTYNQMQTRSADEPMTTFVLCNECGNRWKF
C
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgagaagaggagttaattcggattgcaaaaaaactggacaagatggtgtctaga
aataacacggagggtgccctggacctgctgaatgaattgaagagcttcaacatgacactg
aaacttctgcaggaaacgagaatcggcatgtctgtgaatggaatcaggaagcactgcaca
gacgacgaggtagtttccctggccaagatcctcatcaaggactggaagagactgctggat
gctgcacgtactcagagtactgagaggcccaataagatgaagaatggggttgactccagc
aaatccacagggtccccagtcaggtcccccttagagaaagacaccagtcacaagaggctg
gatgtttctgattcagaacctgaatctgaaaaggaagaatactctgaccaacggcaaaaa
gagaagtacaatgttgaacacaaaaaagacgagagagctgttgaccttaaaaaggagcga
tatacagaggcattcaaaaacaaacggcatgcagaacaatccaaaaatggaaaacataca
gaagatgccagaaaagaaagacatgtagaacacttagaagaacccaaaaaggagagacac
ttcaaaaaatccagaaaagaaagacatttacctatacatgacacaaaaaatgaaagacat
gtgcaagaacccaagaaagaaagtaacctcgaagaacccaaaaatgagagccacaccgat
gaaccgagaaaggaaagacacacagaggaacgcagaaaggagataccaatgtacgaaccc
ccacaagagagacctgttgaaaaccacagacaagggtttgagaggagaagcgtcttggat
gatctttacccctcttgttactctcctcctcgccccccccgaccaccccgtcttcctccc
cctgtcagacgtatgtctggggaggtgaataaaggggtgaaaaaagaggtgaagaaggag
agagagaggagagattctttagacactctgtctccttctcatcctcgtcccacccctccg
tccagacgtccctcagtgaaggtgaagaaagagaggaaaaaagctcctcctgaccctaat
tccccgcttcctcctcttcatcctcatccttctatgcccactgcagcagaggtcaagaag
gagagcaaccttcaaccagtgatgaaaaaaaaagagcctccgcggatttctgtggttaaa
aaagagcctccggaccccaatgctccatttgctcctcttcctctccatctccatcctccc
cctcctgtgaagcgcccgtcagtggaagtcaaaaaggagagagaagagtcgtcagattac
aaacccgtttctctgaaggtgacgtcatctgaccatgtgaaaaaggatagaaaagactcc
gatagcaaagtgcccaaaaaaacatctgttgatgccaagaaagaaagaaaggatttgtca
gattccaaaccaaaatgttctaaaaggcagagtctggactcctcagattccaatccaaaa
cgttctaaaaggccaagtctggatgacaagaaagacagaaaggactccactgactccaag
cccagccattctgtgaaacgtcattcgactgattccaaatcagacaggagggactctgtg
gattccaagactaacagctcaccctcagctaagaagctctctagcgagacgaaagaattt
catagctccaagtcctctcaccctggccctctgcagagaaagtcctcaacagacagtatt
gaacggagagggaaaccagagatgccgaagattcccaccacccccaccagtcccatgtcc
ccctccttcagctcagcaggggttcccctgtccccttgcctcgccactggagaaaccatc
agggacaagtgcatcgagatgctggctgctgctctacgtacagatgacaacttcaaagaa
tttgggacaaactgtgactccatggcagcagagattgaagatcatatttacacggagatg
ggatccacagatatgaagtataaaaacagggtgcggagccgcatcagcaacctgaaggac
cccaaaaaccctggactgcggaggaacgtcctggctggaggcatcgagctgagacgcttc
gccatcatgtctgctgaggagatggctagtgatgagctgaagcagctgaggaacaatctg
actaaggaggccattagggaacaccaactgtccaaaaccagcggtaccatttctgacctg
tttcagtgcagcaagtgcggcaaaaagaactgcacctacaaccagatgcagacccgcagc
gctgatgagcctatgactacttttgttctgtgtaacgagtgcgggaaccgctggaagttc
tgctga
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