KEGG   Oncorhynchus gorbuscha (pink salmon): 123997485
Entry
123997485         CDS       T07892                                 
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like isoform X1
  KO
K03145  transcription elongation factor S-II
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ogo03021]
    123997485
Transcription machinery [BR:ogo03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     123997485
SSDB
Motif
Pfam: TFIIS_M Zn_ribbon_TFIIS Med26 HVO_0758
Other DBs
NCBI-GeneID: 123997485
NCBI-ProteinID: XP_046157726
LinkDB
Position
LG15:complement(52844887..52866309)
AA seq 781 aa
MTREEELIRIAKKLDKMVSRNNTEGALDLLNELKSFNMTLKLLQETRIGMSVNGIRKHCT
DDEVVSLAKILIKDWKRLLDAARTQSTERPNKMKNGVDSSKSTGSPVRSPLEKDTSHKRL
DVSDSEPESEKEEYSDQRQKEKYNVEHKKDERAVDLKKERYTEAFKNKRHAEQSKNGKHT
EDARKERHVEHLEEPKKERHFKKSRKERHLPIHDTKNERHVQEPKKESNLEEPKNESHTD
EPRKERHTEERRKEIPMYEPPQERPVENHRQGFERRSVLDDLYPSCYSPPRPPRPPRLPP
PVRRMSGEVNKGVKKEVKKERERRDSLDTLSPSHPRPTPPSRRPSVKVKKERKKAPPDPN
SPLPPLHPHPSMPTAAEVKKESNLQPVMKKKEPPRISVVKKEPPDPNAPFAPLPLHLHPP
PPVKRPSVEVKKEREESSDYKPVSLKVTSSDHVKKDRKDSDSKVPKKTSVDAKKERKDLS
DSKPKCSKRQSLDSSDSNPKRSKRPSLDDKKDRKDSTDSKPSHSVKRHSTDSKSDRRDSV
DSKTNSSPSAKKLSSETKEFHSSKSSHPGPLQRKSSTDSIERRGKPEMPKIPTTPTSPMS
PSFSSAGVPLSPCLATGETIRDKCIEMLAAALRTDDNFKEFGTNCDSMAAEIEDHIYTEM
GSTDMKYKNRVRSRISNLKDPKNPGLRRNVLAGGIELRRFAIMSAEEMASDELKQLRNNL
TKEAIREHQLSKTSGTISDLFQCSKCGKKNCTYNQMQTRSADEPMTTFVLCNECGNRWKF
C
NT seq 2346 nt   +upstreamnt  +downstreamnt
atgacgcgagaagaggagttaattcggattgcaaaaaaactggacaagatggtgtctaga
aataacacggagggtgccctggacctgctgaatgaattgaagagcttcaacatgacactg
aaacttctgcaggaaacgagaatcggcatgtctgtgaatggaatcaggaagcactgcaca
gacgacgaggtagtttccctggccaagatcctcatcaaggactggaagagactgctggat
gctgcacgtactcagagtactgagaggcccaataagatgaagaatggggttgactccagc
aaatccacagggtccccagtcaggtcccccttagagaaagacaccagtcacaagaggctg
gatgtttctgattcagaacctgaatctgaaaaggaagaatactctgaccaacggcaaaaa
gagaagtacaatgttgaacacaaaaaagacgagagagctgttgaccttaaaaaggagcga
tatacagaggcattcaaaaacaaacggcatgcagaacaatccaaaaatggaaaacataca
gaagatgccagaaaagaaagacatgtagaacacttagaagaacccaaaaaggagagacac
ttcaaaaaatccagaaaagaaagacatttacctatacatgacacaaaaaatgaaagacat
gtgcaagaacccaagaaagaaagtaacctcgaagaacccaaaaatgagagccacaccgat
gaaccgagaaaggaaagacacacagaggaacgcagaaaggagataccaatgtacgaaccc
ccacaagagagacctgttgaaaaccacagacaagggtttgagaggagaagcgtcttggat
gatctttacccctcttgttactctcctcctcgccccccccgaccaccccgtcttcctccc
cctgtcagacgtatgtctggggaggtgaataaaggggtgaaaaaagaggtgaagaaggag
agagagaggagagattctttagacactctgtctccttctcatcctcgtcccacccctccg
tccagacgtccctcagtgaaggtgaagaaagagaggaaaaaagctcctcctgaccctaat
tccccgcttcctcctcttcatcctcatccttctatgcccactgcagcagaggtcaagaag
gagagcaaccttcaaccagtgatgaaaaaaaaagagcctccgcggatttctgtggttaaa
aaagagcctccggaccccaatgctccatttgctcctcttcctctccatctccatcctccc
cctcctgtgaagcgcccgtcagtggaagtcaaaaaggagagagaagagtcgtcagattac
aaacccgtttctctgaaggtgacgtcatctgaccatgtgaaaaaggatagaaaagactcc
gatagcaaagtgcccaaaaaaacatctgttgatgccaagaaagaaagaaaggatttgtca
gattccaaaccaaaatgttctaaaaggcagagtctggactcctcagattccaatccaaaa
cgttctaaaaggccaagtctggatgacaagaaagacagaaaggactccactgactccaag
cccagccattctgtgaaacgtcattcgactgattccaaatcagacaggagggactctgtg
gattccaagactaacagctcaccctcagctaagaagctctctagcgagacgaaagaattt
catagctccaagtcctctcaccctggccctctgcagagaaagtcctcaacagacagtatt
gaacggagagggaaaccagagatgccgaagattcccaccacccccaccagtcccatgtcc
ccctccttcagctcagcaggggttcccctgtccccttgcctcgccactggagaaaccatc
agggacaagtgcatcgagatgctggctgctgctctacgtacagatgacaacttcaaagaa
tttgggacaaactgtgactccatggcagcagagattgaagatcatatttacacggagatg
ggatccacagatatgaagtataaaaacagggtgcggagccgcatcagcaacctgaaggac
cccaaaaaccctggactgcggaggaacgtcctggctggaggcatcgagctgagacgcttc
gccatcatgtctgctgaggagatggctagtgatgagctgaagcagctgaggaacaatctg
actaaggaggccattagggaacaccaactgtccaaaaccagcggtaccatttctgacctg
tttcagtgcagcaagtgcggcaaaaagaactgcacctacaaccagatgcagacccgcagc
gctgatgagcctatgactacttttgttctgtgtaacgagtgcgggaaccgctggaagttc
tgctga

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