Oncorhynchus gorbuscha (pink salmon): 123997549
Help
Entry
123997549 CDS
T07892
Name
(RefSeq) procollagen galactosyltransferase 2-like isoform X1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo00310
Lysine degradation
ogo00514
Other types of O-glycan biosynthesis
ogo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
123997549
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
123997549
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ogo01003
]
123997549
Enzymes [BR:
ogo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
123997549
Glycosyltransferases [BR:
ogo01003
]
O-Glycan biosynthesis
O-linked Gal type
123997549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
123997549
NCBI-ProteinID:
XP_046157864
LinkDB
All DBs
Position
LG15:35914724..35958302
Genome browser
AA seq
618 aa
AA seq
DB search
MMPAVGAVGVGLLCALLVALMPGGMSDLVTLVQDSVRPESSLLMPKVMIAILARNAAHSL
PHYLGCIDRLDYPKERIAIWAATDHSVDNSTAMLREWLKQAQDQYHYVEWRPMEEPKSYT
DEWGPKHWPPSRFNHVMKLRQAALKAARERWADYILFADGDNLLTNPKILNLLMAENLTL
VAPMLESRSLYSNFWCGITPQGYYKRTPDYQPIREWKRLGCFAVPMVHSTFLLDLRRGAS
RELAFYPPHPDYSWAFDDIMVFSFSARQADVQMYVCNREHYGFLPVPLKASQNVDDEKES
FTHTIAEAMIDHNIAPSEYLYNPEIPQDKMGFDEIFLINLKRRLDRRQRMLSTMTSLGLQ
ATITDAVDGKALNSSQLQALGIEMIPGYQDPYSGRVLTRGEIGCFLSHHSTWIQMAERGL
SKVLVLEDDVRFEPRFKRRMMTIIEEVEKAQLDWDLIYVGRKRMQVHQPERSVEGVNNLV
EADYSYWTLGYALSAQGARKLLAAQAFSKMLPVDEFLPVMFNKHPNSDFMSHFEPRDLKA
FSVEPLLLYPTHYTGEPGYVSDTETSTIWDDEATATDWDRLHQHARKTEQQGRIHTVAQN
SVTGDSPPPAARSTRDEL
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgatgccggcggttggagccgtgggagtcggactgctctgcgcgctgcttgtcgccctc
atgccgggtggcatgtcggacttggtgactctggtgcaggactcggtccgacccgaatcg
tcactgctgatgccaaaagtcatgatcgccattctggctcgcaacgcagcgcacagcctg
ccgcactacctgggctgcatcgacaggctagactatccgaaggagcggatagctatctgg
gcagcgacagaccacagtgtggacaacagcacagccatgctgagggagtggctgaagcag
gctcaggaccagtaccactatgtggagtggagacctatggaggagcccaagtcctatact
gatgagtgggggcccaagcactggcctccgtcccgcttcaaccatgtgatgaaactgagg
caggctgctcttaaggcagcacgggaacgctgggcagattacatactgtttgcagacggt
gataacctgctgaccaacccaaagattctcaacctgctcatggctgagaacctgactctg
gtagctcccatgctagagtcacgctctctctactctaacttctggtgtggcatcacccca
cagggttactacaaacgtacccctgactaccagccaatcagggagtggaagcgtctgggt
tgcttcgctgtacccatggtgcactctaccttcctgctggacctgaggcgtggcgccagt
agggagctggccttctacccccctcaccctgactacagctgggccttcgatgacatcatg
gtattctccttctctgcccggcaggcagatgtgcagatgtacgtgtgtaacagagagcac
tatggcttcctaccggttcctctgaaggcctcgcagaatgttgatgacgagaaggagagc
ttcacacacaccatcgctgaggccatgattgatcacaacatagcaccctcagagtacctg
tacaatcccgagataccgcaggacaagatgggctttgatgagatattcctgattaatctg
aaacgtcgtctggacaggagacagaggatgttgagcaccatgacctctttgggtctgcag
gccaccatcactgacgcagtggacggcaaggctctgaactcttctcaactgcaggcatta
ggtatagagatgattccaggttatcaggacccgtactctggccgtgttctaaccagagga
gagataggctgcttcctcagccaccactccacctggatacagatggcggagcgtggtctt
tccaaggtgctagtgctcgaggatgacgtgcgctttgagcccaggtttaagaggcgaatg
atgaccatcatagaggaagtagagaaggcccagctagactgggatctcatttatgttggg
cgtaagcgtatgcaggtgcaccaaccggagcgttcggtggaaggggttaataacctggtg
gaggctgactactcttattggacgctgggatatgccctgtcagcgcagggtgccaggaag
ctgctggctgctcaggccttcagcaagatgctacctgtcgatgagttcctccctgtcatg
ttcaacaaacaccccaattctgacttcatgtctcactttgagcctcgggacctgaaggcc
ttctctgtggagcccctcctcctgtaccccacccactacacgggcgagccgggctacgtg
agtgacacggagacctccaccatctgggacgacgaggccaccgccaccgactgggaccgc
ctgcaccagcacgccaggaagacagagcagcaaggccgcatccacaccgtggctcagaac
agtgtgacgggagactcacctccgcctgccgcccgctccacacgtgatgaactctga
DBGET
integrated database retrieval system
